Basic Information

Insect: Dioctria rufipes
Gene Symbol: ZNF236
Assembly: GCA_963924295.1
Location: OZ002744.1:31280180-31288251[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00032 0.15 15.1 0.2 1 23 125 148 125 148 0.95

2 18 0.0002 0.093 15.8 2.0 1 23 154 176 154 176 0.98

3 18 0.01 4.7 10.4 0.2 2 23 183 204 183 204 0.98

4 18 0.0026 1.2 12.3 1.9 1 23 210 233 210 233 0.97

5 18 5.8e-06 0.0027 20.6 0.2 1 23 263 285 263 285 0.93

6 18 7.5e-06 0.0035 20.3 1.2 1 23 291 313 291 313 0.96

7 18 1e-06 0.00048 23.0 0.3 1 23 319 342 319 342 0.96

8 18 0.0012 0.53 13.4 2.6 1 23 352 375 352 375 0.94

9 18 0.012 5.4 10.2 0.2 2 23 485 506 484 506 0.96

10 18 5.2e-07 0.00024 23.9 0.5 1 23 512 534 512 534 0.99

11 18 0.45 2.1e+02 5.2 1.0 1 21 545 565 545 567 0.78

12 18 0.00031 0.14 15.2 1.2 1 23 573 595 573 595 0.98

13 18 8.8e-05 0.041 16.9 1.9 1 23 633 655 633 655 0.97

14 18 0.00026 0.12 15.4 3.6 1 23 661 683 661 683 0.98

15 18 0.0029 1.3 12.1 0.9 2 23 690 711 689 711 0.96

16 18 0.013 5.9 10.1 5.8 1 23 717 739 717 739 0.97

17 18 5.8e-08 2.7e-05 26.9 0.8 1 23 913 935 913 935 0.99

18 18 7.2e-05 0.034 17.2 1.5 1 23 941 963 941 963 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00032	0.15	15.1	0.2	1	23	125	148	125	148	0.95
2	18	0.0002	0.093	15.8	2.0	1	23	154	176	154	176	0.98
3	18	0.01	4.7	10.4	0.2	2	23	183	204	183	204	0.98
4	18	0.0026	1.2	12.3	1.9	1	23	210	233	210	233	0.97
5	18	5.8e-06	0.0027	20.6	0.2	1	23	263	285	263	285	0.93
6	18	7.5e-06	0.0035	20.3	1.2	1	23	291	313	291	313	0.96
7	18	1e-06	0.00048	23.0	0.3	1	23	319	342	319	342	0.96
8	18	0.0012	0.53	13.4	2.6	1	23	352	375	352	375	0.94
9	18	0.012	5.4	10.2	0.2	2	23	485	506	484	506	0.96
10	18	5.2e-07	0.00024	23.9	0.5	1	23	512	534	512	534	0.99
11	18	0.45	2.1e+02	5.2	1.0	1	21	545	565	545	567	0.78
12	18	0.00031	0.14	15.2	1.2	1	23	573	595	573	595	0.98
13	18	8.8e-05	0.041	16.9	1.9	1	23	633	655	633	655	0.97
14	18	0.00026	0.12	15.4	3.6	1	23	661	683	661	683	0.98
15	18	0.0029	1.3	12.1	0.9	2	23	690	711	689	711	0.96
16	18	0.013	5.9	10.1	5.8	1	23	717	739	717	739	0.97
17	18	5.8e-08	2.7e-05	26.9	0.8	1	23	913	935	913	935	0.99
18	18	7.2e-05	0.034	17.2	1.5	1	23	941	963	941	963	0.98

Sequence Information

Coding Sequence: ATGAATATCTATGAAGATTATGATGATAACACTTTATCAAATCATCGACCAAAAGCTTTTCTAACATTTAGCGAAGTTGACAATGAGTTTCTTGCAGCAAATAATTTTGTTGCCTTGAATTTAGAAAACTTGGAAGAATCTTTTATCCAAGCGAGCAACAACACAGCAGAAATTAATATTGATTTAGGAAACTATGATCTATTGGAAAATGTAATTGCAGAAAGGCAAAATACTCCTAATTCAGATGCACAAGAAACTATCAGCAAGAGCAATCAGTATGATGATACATTTCCGCTACTACCACCTGCTACCCCTATTAAACGAAAGAAATCTAAAAAAGTGTTCACAAATAACAACACAATTCCAAAAACATTTCCTTGTGATTTGTGTGATGAAATGTTTAATGTTCTTAGCGAATTAAAACAACACAAAAGTTCAGTACATGTTCTGAGTGCCTTATACAAGTGTGAACAATGTtcgaaaagttttaattttgagaaaaatttcatGTTGCATTTAGCATCACATACTGCTAGTGCTCCGGCAAGATGTCCCATTTGTGCAGTTACTTTTCAGCGAATTTCCAGTTTTAAAGGTCATCTTGAGACACATATGGACAGTGATAAGTTCAAATGTCACAGATGTGATTTGGAATTTGAATACGAAGAGTACTATGAAAGGCATTTGGAAAAGGCTCATAAGAGAGGGGGTAGTGGTAACATGTCGTCACAGGCTTTCGTAAAAAAGAGGAATAAGGACACATTAAGTAGCAGAAAAACAGGGAAATATATTTGCAAGATATGTGGAAAACGATTTGCTAAACCAAGTTTACTTCTGAGACATGAAACTGCACATACAAAAGTTAAACCGTTTGAGTGCCTTGAATGCAATCAAAGATTTAGCCAAAAATCATCACTGAATCGGCACAGTCTAGTACATAATGGAACTAAACCTTTCGACTGCCCGGATTGTAATTTAAGCTTCAGGCAACGTACAAATCTTATGGTCCATATAAATCGTGTACATTCTTTAGATGCAAATGCAGAAGATAAATTTCCATGTACGAAATGTTCTTGTGTATTCAATAAATTGAAAAGTCTTAATCGACATATAACACTTGTCCACTCAAGAGGACAAGGAGGAGATTGTGCAGAACCTGAAAATGTTGATGAtgacttatattatataaatgatgttttaaatcaaatcaaatgtcTTCAAAGTGATTATATACCGCCATCATCATCGCCACATCATATCACAACTGAAGATAATTCTTTCGCAACGAAAACTATAAATCTACCATCATTAGACCAATCACAAACTATCAATTCAAATGTTGAGGATATACCCCAAATGCAATATGTTAATCTTGTGGATAATTTGTATCCTTCGAATGAACGAGTTAATCGTTTGGTCAAAGAGGTCTATATCGATGGAACTAAGTGGTTAGAATGTTTATATTGtccaaaaaaattcttaaaaccaTTTGATATTGTAAGGCATATACGGGTGCATACTAAGGAAAAGCCTTATCAATGTCAAATATGTGGACGTACTTTTGCTTTGAAAAATACCCTGACAAATCATATACGAATTCATAAACGGCAGTTACCAGAAATTACGAAGATCTACCAATGTACCGTTTGTTTGAAGCGTTTTGATTCGCTTAGAAGATTAGATTTTCATGCTAGACAACACCGAAATTACAAACCTTATGCCTGTTCAATTTGTTTCAAACCATTTGGATCCAGTAATTGTTTGAGAATACATCAACAAATTCATAAACCAAAAAATCCTGAAGAAGAGGAAATCAAGCGTCAACTTCTTCCCCCAATTGTTGCATGTCTAGATGATAAAATATCATCAACAAAAGACTATCCATCGTCGCATAGGTATCAATGCGCAATATGTggtttgaaatttcaaaaatcttccCATCTAAAACAACATGAAGACAGTCATTTGGGACTCAAGCCATTCGAATGCCTCACGTGCTTAAGATTTTTCTCAACAAAAAGTTCTCTTGTACACCATCAGAAAATTCATCTTGGCCACAAAACTAAAGAATGCGAACAATGTTATGCGAAATTTTTTACATCTGGTGACTTAAAGCGACACAAATTGATTCATAGCACAGCAAGAAATTTTATGTGTCCGTATTGCAAGAAAACATTTAAATTGAGGACGACATGCAAAAGTCATATATCAACTCATATAAAGGATGTCATTAGTGATGCAAGTCCAGATCGAACGGAAAATCCTGAAAATAATTCTGATATCTGCAATTATGTTCTAGCCGGTGACGATCACAATTCAGCAGATACAATAGATTCTGTCAATTTAAATTTACCAATGCAAGAATCAGATGAATTGCTTTATGGTGATTTGGGAAGACTTTTGCCACAAAATTGTACTATCACCACCACTGATGAAAGCACACAGAATTTACCGCAAATGACTGCATATAAAACGACGTCCAAAAAACGAGACCATAAAACCATAAGATCATCatcgaaatttataaatattcgagATTTATCGAATACTGAAAATCGTTTATCGAAAAATATAGTTGTAGTATCACATGAAAAAATCTTAGAAGATTCTGTAAGTCCTCCAAATTCTCCTATAAAAAATGTGCAAACTCAACAGCAAGAGGAATTTCTATTTCAAGAGGCACGCTCAAAAATGGCAGAAAAGGAACGGAAAcatgtttcgaaaaaaaaattaccatatGTTTGCGagatttgtaagaaaattttcaagaaacctATCGACCTGAAACGTCATATGCGTACGCATACAAAAGAGAAGCCATTCCAGTGCGAAATATGTGGTAAAGCCTTTAGTCTTAAATGCACAATGGAAGATCATAGAATCACTCATCAAAAAGATAGGCCTACCTTTGATTGTCAGACTCAAGAAGTAAGACCAAAGATAGGTTTTTTCGTCAGTAAATCAACTGGGAAAACCAGTAAAGCTGATCTCCTTCAACAATTCATGTTTCTTTATCAGAAAGCTATTTCAGCCTAA
Protein Sequence: MNIYEDYDDNTLSNHRPKAFLTFSEVDNEFLAANNFVALNLENLEESFIQASNNTAEINIDLGNYDLLENVIAERQNTPNSDAQETISKSNQYDDTFPLLPPATPIKRKKSKKVFTNNNTIPKTFPCDLCDEMFNVLSELKQHKSSVHVLSALYKCEQCSKSFNFEKNFMLHLASHTASAPARCPICAVTFQRISSFKGHLETHMDSDKFKCHRCDLEFEYEEYYERHLEKAHKRGGSGNMSSQAFVKKRNKDTLSSRKTGKYICKICGKRFAKPSLLLRHETAHTKVKPFECLECNQRFSQKSSLNRHSLVHNGTKPFDCPDCNLSFRQRTNLMVHINRVHSLDANAEDKFPCTKCSCVFNKLKSLNRHITLVHSRGQGGDCAEPENVDDDLYYINDVLNQIKCLQSDYIPPSSSPHHITTEDNSFATKTINLPSLDQSQTINSNVEDIPQMQYVNLVDNLYPSNERVNRLVKEVYIDGTKWLECLYCPKKFLKPFDIVRHIRVHTKEKPYQCQICGRTFALKNTLTNHIRIHKRQLPEITKIYQCTVCLKRFDSLRRLDFHARQHRNYKPYACSICFKPFGSSNCLRIHQQIHKPKNPEEEEIKRQLLPPIVACLDDKISSTKDYPSSHRYQCAICGLKFQKSSHLKQHEDSHLGLKPFECLTCLRFFSTKSSLVHHQKIHLGHKTKECEQCYAKFFTSGDLKRHKLIHSTARNFMCPYCKKTFKLRTTCKSHISTHIKDVISDASPDRTENPENNSDICNYVLAGDDHNSADTIDSVNLNLPMQESDELLYGDLGRLLPQNCTITTTDESTQNLPQMTAYKTTSKKRDHKTIRSSSKFINIRDLSNTENRLSKNIVVVSHEKILEDSVSPPNSPIKNVQTQQQEEFLFQEARSKMAEKERKHVSKKKLPYVCEICKKIFKKPIDLKRHMRTHTKEKPFQCEICGKAFSLKCTMEDHRITHQKDRPTFDCQTQEVRPKIGFFVSKSTGKTSKADLLQQFMFLYQKAISA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00453959;
90% Identity: iTF_00453959;
80% Identity: -