Basic Information

Insect: Dioctria linearis
Gene Symbol: ZNF236
Assembly: GCA_963930735.1
Location: OZ005744.1:176789054-176796159[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00022 0.1 15.7 0.2 1 23 126 149 126 149 0.95

2 20 0.0001 0.047 16.7 2.1 1 23 155 177 155 177 0.99

3 20 0.017 8.2 9.7 0.1 3 23 185 205 184 205 0.97

4 20 0.059 28 8.0 1.5 1 23 211 234 211 234 0.95

5 20 6e-06 0.0028 20.6 0.2 1 23 264 286 264 286 0.93

6 20 2.3e-05 0.011 18.8 2.9 1 23 292 314 292 314 0.96

7 20 1.1e-06 0.0005 22.9 0.3 1 23 320 343 320 343 0.96

8 20 0.0012 0.56 13.4 2.6 1 23 353 376 353 376 0.94

9 20 0.007 3.3 10.9 0.2 2 23 488 509 487 509 0.96

10 20 4e-07 0.00019 24.3 0.5 1 23 515 537 515 537 0.99

11 20 0.47 2.2e+02 5.2 1.0 1 21 548 568 548 570 0.78

12 20 0.00057 0.27 14.4 1.2 1 23 576 598 576 598 0.97

13 20 9e-05 0.043 16.9 1.9 1 23 636 658 636 658 0.97

14 20 0.0003 0.14 15.2 2.3 1 23 664 686 664 686 0.98

15 20 0.013 6.2 10.1 0.9 2 23 693 714 692 714 0.96

16 20 0.013 6.2 10.1 5.8 1 23 720 742 720 742 0.97

17 20 6e-08 2.8e-05 26.9 0.8 1 23 917 939 917 939 0.99

18 20 7.5e-05 0.035 17.1 1.5 1 23 945 967 945 967 0.98

19 20 3.8e-05 0.018 18.0 0.3 1 23 974 996 974 996 0.97

20 20 7.5e-06 0.0035 20.3 1.0 1 23 1002 1024 1002 1024 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00022	0.1	15.7	0.2	1	23	126	149	126	149	0.95
2	20	0.0001	0.047	16.7	2.1	1	23	155	177	155	177	0.99
3	20	0.017	8.2	9.7	0.1	3	23	185	205	184	205	0.97
4	20	0.059	28	8.0	1.5	1	23	211	234	211	234	0.95
5	20	6e-06	0.0028	20.6	0.2	1	23	264	286	264	286	0.93
6	20	2.3e-05	0.011	18.8	2.9	1	23	292	314	292	314	0.96
7	20	1.1e-06	0.0005	22.9	0.3	1	23	320	343	320	343	0.96
8	20	0.0012	0.56	13.4	2.6	1	23	353	376	353	376	0.94
9	20	0.007	3.3	10.9	0.2	2	23	488	509	487	509	0.96
10	20	4e-07	0.00019	24.3	0.5	1	23	515	537	515	537	0.99
11	20	0.47	2.2e+02	5.2	1.0	1	21	548	568	548	570	0.78
12	20	0.00057	0.27	14.4	1.2	1	23	576	598	576	598	0.97
13	20	9e-05	0.043	16.9	1.9	1	23	636	658	636	658	0.97
14	20	0.0003	0.14	15.2	2.3	1	23	664	686	664	686	0.98
15	20	0.013	6.2	10.1	0.9	2	23	693	714	692	714	0.96
16	20	0.013	6.2	10.1	5.8	1	23	720	742	720	742	0.97
17	20	6e-08	2.8e-05	26.9	0.8	1	23	917	939	917	939	0.99
18	20	7.5e-05	0.035	17.1	1.5	1	23	945	967	945	967	0.98
19	20	3.8e-05	0.018	18.0	0.3	1	23	974	996	974	996	0.97
20	20	7.5e-06	0.0035	20.3	1.0	1	23	1002	1024	1002	1024	0.98

Sequence Information

Coding Sequence: ATGAATATCTATGAAGATTATGATGATGATAACACTTTATCAAATCATCGACCAAAAGCTTTTCTAACATTTAGCGAAGTTGACAATGAATTTCTTGCAGCAAATAATTTTGTTGCCTTGAATTTAGAAAACTTGGAAGAATCTTTTATCCAAGCGAGCAACAACACAGCAGAAATTAACATTGATTTAGGAAACTATGATCTATTAGAAAAAGTAATTGCAGAAAGGCAAAATACTCCTAATTCAGATGCACAAGAAACTATCAGCAAGAGCAATCTGTATGATGACACTACATTTCCACTACCACCTGCTACCCCTATTAAACGAAAGAAATCTAAAACAGTGTTCACAAAAAAACCAACAATTTCAAAAACCTATCCTTGTGATCTGTGTGATGAAACGTTTACTATTCTTAGCGAATTAAGACAACACAAAAGTTCAGTACATGTTCTGAGTGCCTTGTACAAGTGTGAACAATGTtcgaaaagttttaattttgagaaaaatttcaTGTTGCATTTAGCAACACATACTGCTACTACTCCGGCAATATGTCCCATTTGTGCAGTTACTTTTCAGCGAATTTCCAGTTTTAAAGGTCATCTTGAGACACATATGGACAGTGATAAATTCAAATGTTACAGATGTGATTTGGAATTTGAATACGAAGAGTACTATGAAAGGCATTTTGAAAAGGTTCATAAGAGAGGGGGTAGTGGTAATATGTCGTCGCAGACTTTCGTGAAAAAGAGGAATAAGGACACATTAAGTAGCAGGAAAAcaggaaaatatatttgtaagatATGTGGAAAACGATTTGCTAAACCAAGTTTACTTCTGAGACATGAAACTGCACATACAAAAGTTAAACCGTTCGAGTGCCTTGAATGCCATCAAAGATTTAGCCAAAAATCATCACTGAATCGGCACAGTTTAGTACATAATGGAACTAAACCTTTCGACTGCCCGGATTGTAATTTAAGCTTCAGGCAACGTACAAATCTTATGGTCCATATAAATCGTGTACATTCTTTAGATGCAAATGCACAAGATAAATTTCCATGTACGAAATGTTCTTGTGTATTCAATAAATTGAAAAGTCTTAATCGACATATAACACTTGTCCACTCAAGAGGAAAAGGAGGAGATTATGCAGAAGCTgcaaatgatgatgatgatgacttatattatataaatgatgttttaaatcaaatcaaatgtcTTCAAAGTGATTATATAccgccatcatcatcatcgccaCATCGTATCACATCTGAAGATAATTTTTTCGCAACGAAAACTATAAATCTACCTTCATTAGACCAACCACAAACTATTAATTCAAATGTTGAGAGCATACCACAAATGCAATATGTTAATCTTGTGGATAATTTGTATCCTTCTAATGAACGGGTTAATCGTTTGGTCAAAGAAATCTACATCGATGGAATTAAGTGGTTAGAATGTTTATATTGTCCGAAAAAATTCTTAAAACCATTTGATATTATAAGgcaTATACGGGTGCATACTAAGGAGAAACCTTACGAATGTCAAATATGTGGACGTACTTTTGCTTTGAAAAATACCCTGACAAATCATATGCGAATTCATAAAGGGAAGTTACCAGAAATTACCAAGATCTACCAATGTACGGTTTGTTTGAAGCGTTTTGATTCGCTTAGAAGATTAGATTTTCATGCTAGaCAACACCGGAATTACAAACCTTATGCTTGTTCAGTTTGTTTCAAACCATTTGGATCCAGTAATTGTTTGAGAATACATCAACAAATTCATAAACCAAAAAATCCTGAAGAAGAGAAAATAAAGCGTCAACTTCTTCCACCAATTGATGCATGTCTAGATGATAAGCTATCGTCAAGAAAAGACTATACATCGTCGCGTAGCTATCAATGCGCAATATGTggtttgaaatttcaaaaatcttCCCATCTAAAACAACATGAAGACAGTCATTTGGGACTTAAGCCATTCGAATGCCTCACGTGCTTAAGAAATTTCGCAACAAAAAGTTCTCTTGTACACCATCAGAAGATCCATCTTGGCCACAAAACAAAAGAATGCGAACAATGTTATGCGAAATTTTTTACAACTGGTGACTTAAAACGACACAAATTGATTCATAGCACAGCAAGAAATTTTATGTGTCCATATTGCAAGAAAACATTTAAATTGAGAACGACATGCAAGAGTCATATATCAACTCATATAAAGGATGTCATTAGTGATGCAAATACAAATCGAACAGAAAATCCTGAAAATAATTCTGATATCTGCAATTATGTTCTAGCCGGTGACGATCACAATTCAGCAGATACAATAGACTCTGTCAATTTAAATTTACCAATGCAAGAATCAGATGAATTGCTTTATGGTGATTTGGCAAGACTTTTGCCACAAAATTGTACTACCATCAACACTGATGAAAGCACACAGAACTTACCGCAAATGACTGCATATATTACGACGTCAAAAAAACGAGACCATAAAACCATAAGATCATCgtcgaaatttataaatattcgagATTTATCGAATACTGAAAATCGTTTATCGAAAAATATAGTTGTAGTATCACATGAAAAAATCTTAGAAGAAGATTCTGTAAGTCTTCCAAATTCTCCTATAAAAAATGTCCAAACTCATCAGCAAGAGGAATTTCTATTTCAAGAGGCACGCATAAAAATGGCAGAAAAGGAACGGAAACATGTTTCGAGAAAAAAATTACCATATGTTTGCGAGATTTGTAAGAAAATCTTCAAGAAACCTATCGACTTGAAACGTCATATGCGTACGCATACAAAAGAGAAGCCATTCCAGTGCGAAATATGTGGTAAAGCGTTTAGTCTTAAATGCACAATGGAAGATCATAGAATCACTCATCAAAAAGATAGGCCTACCTTTGATTGTCAGGTCTGTGGGAAGAAATATGCTACGAAAAATGTTCTCAACATTCATTTACGTATTCATACCGGAGAGAGGCCATATAGTTGTGAGATATGTTCGAAAACTTTTCGAACACCCGGTCACAGGATTGTACATCTTCGAATTCattcgaaagaaaaattagaagtagcgaaaaagaagaaaaaatag
Protein Sequence: MNIYEDYDDDNTLSNHRPKAFLTFSEVDNEFLAANNFVALNLENLEESFIQASNNTAEINIDLGNYDLLEKVIAERQNTPNSDAQETISKSNLYDDTTFPLPPATPIKRKKSKTVFTKKPTISKTYPCDLCDETFTILSELRQHKSSVHVLSALYKCEQCSKSFNFEKNFMLHLATHTATTPAICPICAVTFQRISSFKGHLETHMDSDKFKCYRCDLEFEYEEYYERHFEKVHKRGGSGNMSSQTFVKKRNKDTLSSRKTGKYICKICGKRFAKPSLLLRHETAHTKVKPFECLECHQRFSQKSSLNRHSLVHNGTKPFDCPDCNLSFRQRTNLMVHINRVHSLDANAQDKFPCTKCSCVFNKLKSLNRHITLVHSRGKGGDYAEAANDDDDDLYYINDVLNQIKCLQSDYIPPSSSSPHRITSEDNFFATKTINLPSLDQPQTINSNVESIPQMQYVNLVDNLYPSNERVNRLVKEIYIDGIKWLECLYCPKKFLKPFDIIRHIRVHTKEKPYECQICGRTFALKNTLTNHMRIHKGKLPEITKIYQCTVCLKRFDSLRRLDFHARQHRNYKPYACSVCFKPFGSSNCLRIHQQIHKPKNPEEEKIKRQLLPPIDACLDDKLSSRKDYTSSRSYQCAICGLKFQKSSHLKQHEDSHLGLKPFECLTCLRNFATKSSLVHHQKIHLGHKTKECEQCYAKFFTTGDLKRHKLIHSTARNFMCPYCKKTFKLRTTCKSHISTHIKDVISDANTNRTENPENNSDICNYVLAGDDHNSADTIDSVNLNLPMQESDELLYGDLARLLPQNCTTINTDESTQNLPQMTAYITTSKKRDHKTIRSSSKFINIRDLSNTENRLSKNIVVVSHEKILEEDSVSLPNSPIKNVQTHQQEEFLFQEARIKMAEKERKHVSRKKLPYVCEICKKIFKKPIDLKRHMRTHTKEKPFQCEICGKAFSLKCTMEDHRITHQKDRPTFDCQVCGKKYATKNVLNIHLRIHTGERPYSCEICSKTFRTPGHRIVHLRIHSKEKLEVAKKKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00455351;
90% Identity: iTF_00455351;
80% Identity: -