Druf089919.1
Basic Information
- Insect
- Dioctria rufipes
- Gene Symbol
- Hr39
- Assembly
- GCA_963924295.1
- Location
- OZ002744.1:2736695-2739193[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.58 2.2e+04 -2.9 0.4 34 45 42 53 15 126 0.49 2 5 0.24 9.4e+03 -1.7 1.0 62 132 245 264 140 303 0.55 3 5 1.2e-11 4.5e-07 32.3 0.0 1 64 425 488 425 496 0.81 4 5 0.0021 82 5.1 0.0 78 160 478 551 461 554 0.74 5 5 1.2e-69 4.5e-65 223.3 0.3 199 379 548 723 532 727 0.95
Sequence Information
- Coding Sequence
- ATGTCCACTCCCCTTGGGGATATGTCCCCGATTTTAGCTAGTCCGAATAGCTCAATGCTTAGTTCGAATATCATTGGCAATGTGTCGACAACGACGACGTCGACGACGATGACTGCCCGAAATAATATCTCAGTCACAAGTATAAAATGTGAAGAAAATGTTCGACCGCCGTCAGCCCCAGCAGCAATTACAACCAACACCACCACCACAAACAACTCAACGTTAAATGGAATTCCTAacagtaataatttttttaacggTGGAATTCGAATTTCCGTCCCAAAAGTCGAAGATTCTGATGAATCTGAATCGGAATTGTCGACAATAGAAAACTCAAAAGTGAACCGAAGATCGAATATGACAAATAAGAATGGACCACGACCCATGTCTTGGGAGGGTGAACTTTCTGAAGCCGAAGATCTTATGGACATTGAGAATTCAGTCAGCAATGATAAGCAGTTTGAGGATTCGCAGATGTCTACTAAGGATGATTCGAGGCCGTGTGCAAATATAAAACCTGAATTTGATCAGATTTCCGTAGAAACAGGTGCAGGCGTTATATTTACGTCGGCATCATCAAAAAAATTTCAGAGTGATATAGTTAATCTTAAGTATGAACCTGGTCTCACGGATCCATCAGTTCCAAGTGGCCTAAATTCACCATTGCTAGCTAGATCTAAGACAAATCTACTACCGGCCAATCCAAGTCCGGATTCAGCTATTCATTCCGTTTATACGCACAGTTCTCCTAGCCAATCGCCACTTACGTCTCGACATGCACCGTATACACCATCGCTGAGTCGCAACAATAGTGATGCGTCACACAGTAGTTGTTATTCGTATAGTTCAGAATTTAGTCCTACACATTCTCCGATCCAAGGTCGTCACAATATCTACGGAAATTTTAATGGGTCCTTGCATCATTCAGTTTTATATCGACCAGTTTTAGATGGCGAAGGTGGTCAATCATTACCTCCAACACCACGTAGACAGGATGAAGTTATCATTGAAACAGATACGATTCCATCTGCCGGTATATCTAGGCAACAGCTCATCAACAGTCCATGCCCGATTTGTGGAGATAAAATCTCTGGATTTCATTATGGAATTTTCTCATGTGAGTCTTGTAAGGGTTTCTTTAAACGGACGGTACAAAATCGAAAAAATTACGTTTGCGTTCGTGGTGGTCCATGTCCTGTTACAATATCAACACGAAAAAAATGTCCTGCATGCCGATTTGACAAATGCCTGCAGAAGGGTATGAAACTTGAGGCCATTCGAGAGGATCGAACTCGAGGTGGTAGATCTACCTATCAATGCTCGTATACGTTGCCGAATTCAATGTTGAGTCCATTAATGAGCCCGGATGCAAGTTGTTCGCAAACGAATCAACGACTTGGTATCAACGGATGTATGGTAAAATCTGAACAGCCTGATACCAGCAATGGAAATAGTAATAGCAGTATAGGCGGCACCAATCATCGGACTAGTATCCCGCCACTTTTACAGGAAATCATGGATGTTGAGCATCTGTGGCAGTACAATGAGGGTGAATTGTCGCGACTCAATCAACCAACATCCGGTTCAACAATGGATCCTGCAAACTTATCAGCTAATCCGCTTTTAGCTAGTACTGGCCTTTCTTCGAATGGAGAGAATACAAATCCGGATTTGATAGCAAATCTTTGTACAGTTGCCGATCATCGACTGTACAAAATTGTTAAATGGTGCAAGAGTCTGCCACTGTTCAAGCATATTTCGATCGACGATCAAATATGTTTGCTCATTAATTCTTGGTGTGAATTACTTCTATTTTCTTGTTGCTTCCGATCGATAGTGACACCCGGAGAAATAAAGATTTCCCAAGGGAAATCAATCACACTTGAACAGGCTAAATCTAGCGGTCTCCAGGCATGCATTGAAAGAATGCTTAACCTGACAGACCACTTAAGGCGATTGCGTGTTGATCGATATGAGTACGTTGCCATGAAAGTTATAGTTCTGCTACAATCCGatACATCGGAGTTGCGAGAACCTGTGAAAGTTCGTGAGAGCCAAGAGAAAGCACTGCAAGCCTTACAAGCCTACACTTTAGCACATTATCCAGATTCACCAGCAAAATTCGGTGAATTACTCTTAAGAATTCCAGAATTACAAAGGACATGCCAGGTAAATTCGACTGTTTGA
- Protein Sequence
- MSTPLGDMSPILASPNSSMLSSNIIGNVSTTTTSTTMTARNNISVTSIKCEENVRPPSAPAAITTNTTTTNNSTLNGIPNSNNFFNGGIRISVPKVEDSDESESELSTIENSKVNRRSNMTNKNGPRPMSWEGELSEAEDLMDIENSVSNDKQFEDSQMSTKDDSRPCANIKPEFDQISVETGAGVIFTSASSKKFQSDIVNLKYEPGLTDPSVPSGLNSPLLARSKTNLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNIYGNFNGSLHHSVLYRPVLDGEGGQSLPPTPRRQDEVIIETDTIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVTISTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLMSPDASCSQTNQRLGINGCMVKSEQPDTSNGNSNSSIGGTNHRTSIPPLLQEIMDVEHLWQYNEGELSRLNQPTSGSTMDPANLSANPLLASTGLSSNGENTNPDLIANLCTVADHRLYKIVKWCKSLPLFKHISIDDQICLLINSWCELLLFSCCFRSIVTPGEIKISQGKSITLEQAKSSGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELREPVKVRESQEKALQALQAYTLAHYPDSPAKFGELLLRIPELQRTCQVNSTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00424727;
- 90% Identity
- iTF_00424727;
- 80% Identity
- iTF_00455000;