Druf041456.1
Basic Information
- Insect
- Dioctria rufipes
- Gene Symbol
- -
- Assembly
- GCA_963924295.1
- Location
- OZ002740.1:374746466-374757078[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-09 4.5e-07 32.1 0.0 1 38 420 458 420 463 0.90 2 4 1.8e-12 5.6e-10 41.4 0.1 2 39 475 512 474 515 0.94 3 4 1.7e-16 5.4e-14 54.2 0.0 1 45 529 574 529 574 0.98 4 4 6.6e-17 2.1e-14 55.6 0.0 1 43 581 624 581 626 0.96
Sequence Information
- Coding Sequence
- ATGAAGTCTATCGGTAATAGGCCAGATGGTAAAGGCGCAGATCTAAGAATTGCTATCATTGTTACGCCCTGGATTCTTGGGCAAAGGCagggGCTGTTGCGCACCGCAGaacagttaaaaattaaaggtctTTGTGAGACTGCAGAAACTGTAGATGAAATATCAACAGAAACAGCTACTACAACAACAATAACAGTTCCAGAATCGATACCGATTACTACGAACATTGCAAACACCCACACATTATCGCATCTCAATAATACGACACAGCGAAAGTCACGTGTCCGAAAACGTTCAAAATCACCTGATACAAATCAATCGATACTCGGCACAAATCAAACCTTCAGTACATCATCCATCGTAAATTTAAATTCGTCGACGTCAACAATCACTTCTGGAACATCGATATCTGGTGGATCTTCCATAACAAGTACTCCTATAACTCACTTCAAAACTGAACATCAATCCCAAGTGACCAGCTCCAATACTGATACAGTTTCTGACAATATCACAACACAGCCAGCTAAAATTTGTAAAACTGAAGATACATCAAATAATGGAAGTGGGGTTGTTACCCCAGGTACTGCAATCGTAACCCAAATTGTCGTTTCACGCGACGGTAAAGATAAAAATATGACCAGTCTGGGCATGGGAATTaACGGCGGCCTGTTGGGTGTACCAATGGGTTTTCTAGATTTTGCGCCCGAACCACCAGCACCCTCAGCAACGCCGGTTACAGAGCATGTAGACATGTCGTGTCCTCCGAGTGCTGATACTAGAGACTTATCAAATCCCACCGAAGCCCTCGATATAGACAATCAGATTGCCCAACACATTATCCATCGCCTCGACCAATCCCCAATGCATCACATGTCACATCAGGCAACCGCAGATGACAACAATTCCAATCTTATACAAAATATAAAGAGTGAAGTGGTAGACGTTAAACATCATGTACAGCAGCAAATTCAGAGCCAGCAACAGGTACAAACTCATCAGCAACACAGTCATCATCAAGACATCTCGACGGTTATGGAGATTGATCCTAGCAACATTAAGCATGAGCCAGGGATGATCATCACTCCCGAGATCGTCACAATGATGACCACAGGACATATGGACATTTACAATTCCGATACTAGTGAAGATTCTCTAATGATTGCAAACGGTTCACCAAACGATAACAACGAACCACACTACACAAATTTGGATCAACAACAGGATATGAGAGGTCAACCAAACGGTGCGAAAACATGGACACAAGACGATATGAATTCAGCACTGGATGCgcttaaaaatcaaaatatgagCTTGACAAAAGCATCTGTAACGTACGGCATTCCTTCAACAACGCTTTGGCAGCGAGCCCATCGAATGGGTATTGATACTCCGAAGAAGGAAGGTACAACAAAATCATGGAATGAAGAAGCTCTGAATAATGCTCTGGAAGCCCTCCGAACCGGACAAATATCAGCCAATAAGGCCTCAAAGGCATACGGAATTCCGTCCTCCACTCTGTACAAAATAGCACGTAGAGAAGGTATACGACTGGCGGCGCCATTTAATGCCGCTCCAACAACATGGACACCGGAAGACTTAGAACGTGCATTAGAAGCTATTCGCGCTGGTCATACATCCGTCCAAAAAGCTAGCACAGAATTCGGTATACCAACAGGGACTCTGTATGGCCGATGCAAAAGGGAAGGTATAGAACTTTCGCGATCAAATCCTACACCGTGGTCAGAAGACGCTATGAATGAGGCTTTAGTAGCAGTGAGGGTGGGCCATATGTCCATAAATCAAGCTGCAATCCACTACAATCTACCGTATAGTTCACTTTATGGCCGATTTAAGAGAGGCAAATATGATACAAATACAACAAACGCCAACAGTAACAATAGCAGTGCGAACACATCtggaaatattgaaataattgagCATAGTCCTGAAAATTCGTTGCACATATTTCAGCAGTTTCAATATAGTCCTGGGCCGTCAAATACCCAGAcacatcatcatcagcagcagcagcagcagcagcaacagcaacctcaacaacagcagcaacagcagcagcagcagcaacaacaacaacaacagcagcagcaacaacaacaacaacagcaagtgcagcagcagcaacaacaacaacaagcacAACATCAAATCCAACAGATTCAGCAAGTTCAGCAAGTTCAACAAGTTCAGCAAGTTCAACAACACCACATCCAACAACAACAGCATCCACAACAACAGCATCATCACTCCCAAcatcaacagcaacaacaacaacatctacagcagcagcagcaagatgTTGTGACCTCTTCCAGTCAAGTTCACACACAGGCCAACCAAATTCAACAAATCTACCATCATCATAGCACATCGGAGAGAAGTTGa
- Protein Sequence
- MKSIGNRPDGKGADLRIAIIVTPWILGQRQGLLRTAEQLKIKGLCETAETVDEISTETATTTTITVPESIPITTNIANTHTLSHLNNTTQRKSRVRKRSKSPDTNQSILGTNQTFSTSSIVNLNSSTSTITSGTSISGGSSITSTPITHFKTEHQSQVTSSNTDTVSDNITTQPAKICKTEDTSNNGSGVVTPGTAIVTQIVVSRDGKDKNMTSLGMGINGGLLGVPMGFLDFAPEPPAPSATPVTEHVDMSCPPSADTRDLSNPTEALDIDNQIAQHIIHRLDQSPMHHMSHQATADDNNSNLIQNIKSEVVDVKHHVQQQIQSQQQVQTHQQHSHHQDISTVMEIDPSNIKHEPGMIITPEIVTMMTTGHMDIYNSDTSEDSLMIANGSPNDNNEPHYTNLDQQQDMRGQPNGAKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIDTPKKEGTTKSWNEEALNNALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALVAVRVGHMSINQAAIHYNLPYSSLYGRFKRGKYDTNTTNANSNNSSANTSGNIEIIEHSPENSLHIFQQFQYSPGPSNTQTHHHQQQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQQVQQQQQQQQAQHQIQQIQQVQQVQQVQQVQQHHIQQQQHPQQQHHHSQHQQQQQQHLQQQQQDVVTSSSQVHTQANQIQQIYHHHSTSERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01431749;
- 90% Identity
- iTF_00453132;
- 80% Identity
- -