Basic Information

Insect: Dioctria linearis
Gene Symbol: -
Assembly: GCA_963930735.1
Location: OZ005740.1:348927487-348936702[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.4e-09 4.6e-07 32.1 0.0 1 38 426 464 426 469 0.90

2 4 1.8e-12 5.7e-10 41.4 0.1 2 39 481 518 480 521 0.94

3 4 1.7e-16 5.6e-14 54.2 0.0 1 45 535 580 535 580 0.98

4 4 6.6e-17 2.1e-14 55.5 0.0 1 43 587 630 587 632 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.4e-09	4.6e-07	32.1	0.0	1	38	426	464	426	469	0.90
2	4	1.8e-12	5.7e-10	41.4	0.1	2	39	481	518	480	521	0.94
3	4	1.7e-16	5.6e-14	54.2	0.0	1	45	535	580	535	580	0.98
4	4	6.6e-17	2.1e-14	55.5	0.0	1	43	587	630	587	632	0.96

Sequence Information

Coding Sequence: ATGTTGAAGCGTATGGGCCAGGGTAATGAAATGCTAATGTTCCGAAGTGAGTTGGCAGAAATTTTGGATGCGTTCGTAGAAATTACGTTGAAATTGGCTGTTTTAAATgGCCTGTTGCGCACCGCAgagcaattaaaaattaaaggtctTTGTGAGACTGCAGAAACCGTAGATGAAATATCAACAGAAACAGCTACTACAACAACAATAACAGTTCCAGAATCGATTCCGATTACTACGAACATTGCAAACACCCACACATTATCGCATCTCAATAATACCACACAGCGAAAGTCACGTGTCCGAAAACGTTCAAAATCACCAGATACAAATCAATCGATACTCGGCACAAATCAAACCTTCAGTACATCATCCATCGTAAATTTAAATTCATCGACGTCAACAATCACTTCTGGAACATCGATATCTGGTGGATCTTCCATAACAAGTACTCCTATAACTCACTTCAAAAGTGAACATCAATCCCAAGTGACCAGCTCCAATACTGATACAGTTTCTGACAATATCACAACACAGCCAGCTAAAATTTGTAAAACTGAAGATACATCAAATAATGGAAGTGGGGTTGTTACCCCAGGTACTGCAATCGTAACCCAAATTGTCGTTTCACGCGAcggtaaagataaaaatatgaCCAGTCTGGGCATGGGAATTaACGGCGGCCTGTTGGGTGTACCAATGGGTTTTCTAGATTTTGCGCCCGAACCACCAGCACCCTCAGCAACACCGGTTACAGAGCATGTAGACATGTCGTGTCCTCCGAGTGCTGATACTAGAGACTTATCAAATCCCACCGAAGCCCTCGATATAGACAATCAGATTGCCCAACACATTATCCATCGCCTCGACCAATCCCCAATGCATCACATGTCACATCAGGCGACCGCAGATGACAACAATTCCAATCTTATACAAAATATAAAGAGTGAGGTGGTAGACGTTAAACATCATGTACAGCAGCAAATTCAGACCCAGCAACAGGTACAAACTCATCAGCAACACAGTCATCATCAAGACATCTCAACGGTTATGGAGATTGATCCTAGCAACATTAAGCATGAGCCAGGGATGATCATCACTCCCGAGATCGTCACAATGATGACCACAGGACATATGGACATTTACAATTCCGATACTAGTGAAGATTCTCTAATGATTGCAAACGGTTCACCAAACGATAACAACGAACCACACTACACAAATTTGGATCAACAACAGGATATGAGAGGTCAACCAAACGGTGCGAAAACATGGACACAAGACGATATGAATTCAGCATTGGATGCgcttaaaaatcaaaatatgagTTTGACAAAAGCATCTGTAACGTACGGCATTCCTTCAACAACGCTTTGGCAGCGAGCCCATCGAATGGGAATTGATACTCCGAAGAAGGAAGGTACAACAAAATCATGGAATGAAGAAGCTCTGAATAATGCTCTCGAAGCCCTCCGAACCGGACAAATATCAGCCAATAAGGCCTCAAAGGCATACGGAATTCCGTCCTCAACTCTGTACAAAATAGCACGTAGAGAAGGTATACGACTGGCGGCGCCATTTAATGCCGCTCCAACAACATGGACCCCGGAAGATTTAGAACGTGCATTAGAAGCTATTCGCGCTGGTCATACATCCGTCCAAAAAGCTAGCACAGAATTCGGTATACCAACAGGGACTCTGTATGGCCGATGCAAAAGGGAAGGTATTGAACTTTCGCGATCAAATCCTACACCGTGGTCAGAAGACGCTATGAACGAGGCTTTAGTAGCAGTGagggTGGGCCATATGTCCATAAATCAAGCTGCAATCCACTACAATCTACCGTATAGTTCACTTTATGGCCGATTTAAGAGAGGGAAATATGATACAAATACAACAAACGCCAACAGTAACAATAGCAGTGCGAACACATctggaaatattgaaataattgagCATAGTCCTGAAAATTCGTTGCACATATTTCAGCAGTTTCAATATAGTCCTGGGCCGTCAAATACCCAGACACAtcatcatcagcagcagcagcaacaacaacctcaacaacaacagcaacagcaacagcagcagcaacaacagcagcagcagcaacaacaacaacaagtgcagcagcaacagcaacaacaacaacaagcacAACATCAAATCCAACAGATTCAGCAAGTTCAGCAAGTTCAGCAAGTTCAACAAGTTCAGCAAGTTCAACAACACCACATCCAACAACAACAtccacaacaacaacagcatcatCACTCGCAacatcaacagcaacaacaacaacatctgcAGCAACAGCAGCAAGATGTTGTGACCTCTTCCAGTCAAGTTCACACACAGGCCAACCAAATTCAACAAATCTACCACCATCATAGCACATCGGAGAGAAGTTGa
Protein Sequence: MLKRMGQGNEMLMFRSELAEILDAFVEITLKLAVLNGLLRTAEQLKIKGLCETAETVDEISTETATTTTITVPESIPITTNIANTHTLSHLNNTTQRKSRVRKRSKSPDTNQSILGTNQTFSTSSIVNLNSSTSTITSGTSISGGSSITSTPITHFKSEHQSQVTSSNTDTVSDNITTQPAKICKTEDTSNNGSGVVTPGTAIVTQIVVSRDGKDKNMTSLGMGINGGLLGVPMGFLDFAPEPPAPSATPVTEHVDMSCPPSADTRDLSNPTEALDIDNQIAQHIIHRLDQSPMHHMSHQATADDNNSNLIQNIKSEVVDVKHHVQQQIQTQQQVQTHQQHSHHQDISTVMEIDPSNIKHEPGMIITPEIVTMMTTGHMDIYNSDTSEDSLMIANGSPNDNNEPHYTNLDQQQDMRGQPNGAKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIDTPKKEGTTKSWNEEALNNALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALVAVRVGHMSINQAAIHYNLPYSSLYGRFKRGKYDTNTTNANSNNSSANTSGNIEIIEHSPENSLHIFQQFQYSPGPSNTQTHHHQQQQQQQPQQQQQQQQQQQQQQQQQQQQQVQQQQQQQQQAQHQIQQIQQVQQVQQVQQVQQVQQHHIQQQHPQQQQHHHSQHQQQQQQHLQQQQQDVVTSSSQVHTQANQIQQIYHHHSTSERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01431749;
90% Identity: iTF_00454434;
80% Identity: -