Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963924295.1
Location
OZ002742.1:3741868-3746703[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-24 6.1e-20 74.0 0.0 2 88 156 238 155 239 0.95

Sequence Information

Coding Sequence
ATGTCCGGTTTAATGAGATCCAGTGAAATGAACAACAATTCGAGTGGTAGATTATCGCCGCAAAATACCAGCTCATATCAGACAATTTCAAATCGAAGTGAATTATTATCAGAAACATGTAGTTCAGGCGCGTTAGAAAATGGTAACAATACTTCTAGTGTTGTTTCCCCATCAAATAATGAAAATCCACACTTGCGTTCAACATCGACAACATTTTCACTTGACAAAAATGAGGAATTCCATTTCCTGAAGCCATCAGAAGTTCCTGTATTCAAACCAAATGAAGAAGAATTCAAAAATCCGCTAGGCTACATCAGTAAAATTAGACCAGTAGCAGAAAAATTTGGTATAGTGAAAATTAAGCCACCAAAAACATGGACACCTCCGTTTGCAGTAGATGTGGATAAGCTTCGTTTTACACCACGGGTCCAAAGATTGAACGAGCTTGAAGCAAAGACCAGAGTGAAGTTAAATTTCCTTGATCAGATTGCTAAATTTTGGGAATTGCAAGGATCATCTTTGAAAATTCCACAAGTTGAACGAAAAATTCTTGATTTATACTCTCTACATCGTATTGTTCAGGAAGAAGGTGGTATGGAACAGGTGTCAAGAGATCGAAGGTGGTCTAAAGTTTCTCTTAGAATGGGCTATCCGCCAGGAAAGAATGTTGGTGCAACTTTACGATGTCATTATGAAAGAATTCTGCATCCATATAACATTTTTACATCTGGTAAAGTTGTAGACTTGAAGCTTGAGTCCGATATTGATGATAAAAGTTACAGACCTCATAGGATTATATCACGGCAACAAATAACTCCACCAAACGAGACGACAGCAAGACGATCTAAAAGGTTTGCAAATAGTACTGCAACTTGTGGTCTAGGATTGGGAAATGTAATCAAAGATGAAATAGACAAAATTGAAGAATCCGAACTTGAGAAAGATAGAGCAAAAGAATTAAGACGTCTACAATTTTATGGGGCTGGACCAAAAATGGCTGGTTACACGATGAGAAGTAAAATGGCAGGTGGAATGAACGGcaagaaaaaatcaaaagttgTCGATCCACTGGCGAAATACATTTGTTATATATGCAATCGAGGTGATGCTGAAGAATCGATGCTCTTATGTGATGGCTGTGATGACAGTTATCACATGTTCTGCTTAATGCCGCCTTTAAATGAAATTCCCAAAGGAGACTGGAGATGTCCCAAATGTATTGTAGAAGAAGTAAGTAAGCCTCAAGAGGCATTTGGTTTTGAACAGGCATCACGAGAATATACACTACAGCAATTTGGTGAAATGGCAGATCAATTTAAGGCCGATTACTTTAATATGGCTGTCCACCTAGTGCCAACAGATTTAGTTGAACGAGAATTTTGGCGAATTGTTTCATCAATTGACGAAGACGTTACAGTGGAATATGGCGCCGATTTGCACACCTTAGATCATGGATCTGGATTTCCAACAAAAGATTCCATCAATCTTTTGCCCACCGATAAAGAATATGCAGAGTCCAGCTGGAATTTAAATAATCTTCCACTTTTGGAGGAATCCATTTTGGGACATATTAATGCTGATATTAGTGGCATGAAAGTCCCTTGGATGTATGTCGGAATGTGTTTTGCTACTTTCTGCTGGCACAACGAAGATCATTGGAGTTACTCGATAAATTATTTGCATTGGGGAGAGCCGAAAACTTGGTATGGAGTTCCGGGTAGCAGCGCAGAAGCATTTGAGGAAACAATGAAGAGTGCAGCACCTGAACTATTCCACTCCCAGCCTGATTTACTACATCAGTTGGTTACAATAATGAATCCGAACATTCTAATGAAAGCCGGAGTCCCAGTTTATAGAACAGATCAACATGCCGGGGAATTCGTTGTCACGTTCCCTAGGGCATATCATGCTGGCTTCAATCAAGGATATAATTTTGCAGAAGCCGTCAATTTTGCACCTGCAGATTGGTTAAAAATGGGACGAGAATGTATTAATCATTATTCAGTTTTACGACGATTCTGTGTCTTTTCGCATGATGAACTCGTTTGTAAAATGGCGTTAGATCCAGATAAATTAAACTTGGGAATTGCTACTGCATGCTACTTAGATATGACTGAAATGGTTGAATCAGAGAAGAAATTGCGTAAATCACTCTTAGAATGGGGAGTTACAAAAGCAGAACGTCAGCCGTTCGAATTGATCCCAGATGATGAACGACAGTGTGAATCTTGCAAAACCACCATATTTCTATCGGCAGTTTCTTGTACCTGCTCTAAGGCAATCGTGTGCCTTAGACACTACACAGAATTATGCGAATGCCTACCTGGAAATCATACACTAAAATATCGATATACTCTGGACGAACTTCCACTTATGTTGAAAAAGCTTAAAGTAAAAGCAGAAAGCTTTGAAAATTGGTTGTCGAAGATTCGAAATATTCTAGACCCGAATACATCCACCAATATAACTTTGGAGGAATTACAAGAACTAGCCCAGGAAGCTGAAGACAAAAAATTCCCCAACTCAGTTCTCCTAGAACGACTTAAATCAGCTGTACTTGAAGCAGAAAAGTGTGTAATTGTGATCCAGCAATTAGATATAAACAAGATTCGAACAAGAAGCCGAAATTCTGGGGAATCAGCCAAGTACAAGTTGTCTTTGGAAGAACTGGAACTGTTTGTACAAGAAATCGATAATCTTTGTTGTATTATTAAAGAAGGGCAAAGTGTACGAGAATTGTTAGCTTTAGGCAAAGAGTTCGTAGAGTCTGCTAAGTTGCAATTATCAAAACCAATAAACAAAATCGATGAGAAAATAATAGAGCGGCTGAGTGATGAGGGTACCTCACTTTGCATTGAACTGCATGAAATCAAAGCTTTAAGAGATCGTCAACGTCAAGTGAATTGGTATAATCGTGTTAAGCAATTCCGAGAATCCAGAGAAAAGAAATCTCTTAGCGACATTGATGCTCTAATCAAGGAGGGGCTTATTATAACGCCCGACTCTGTTATTGAAAAGCAACTTGTTTTATTACAGGACATAATAACTTCCATTGAAGATTGGGAGGTTCTAGCAGCTAAATGCCTCCAGAGTGGCTCTCAGCAAGATTTACCAAAAATGGAACTGTTACTGGAACGTGCAGAAGAAATCCAGGGCACTCTTCCTACACAAAGTTCTCTGAAAGATGCTATAAAAAAGACGAAAGAATGGCTTACAACGGTAGAAATTCTTCAGGCAAATGAAAACTATCCATATTTTCATACATTGGAGAATGTTGTTAGCCGTGGCAAGAATATACCCTTTCAGTTGGAAGAATTAAAGACTATGGAAGAGCATTTGGAAAGTGCCCGACACTGGAAGGAGCGTGCCGCGAAGAAGTTTCTAAAAAAGGAGGCTGCTCTTACACTTATCGACGTATTGTCACCACGCTCAGAGGCTTTTATTACCGGCTCTAAGGTAAAAAGGAAAACCTTAGAAGATCATTTTAAAGAAGAGATGGATATTGCTCAAATAGCGAATTTCTTTAAAACCGCCGCTGACAAAGAGTTGGATGACATGCGAGAGCTAAGAAAACTCAATTCAGCCAAAAATCCTGACGAAGATAAATTCTGTGTATGCAAACGCAAGATTCAAGGTCAAATGTATCAATGCCAATTATGCAGAGATTGGTTCCATAAGGGATGTGTTACGCCGCCTAGAAGCATTGTTCGCTCCCGTACTGCCAATGTTATTTCACAATCTGGTGGTTCAGATGAGCAGATACTTCAAACTTCCGAAAAAGAATCTAAGTATTTGTGCGAATCATGTACACGATCACGAAGACCACATCTACAAACTGTTCTATCTTTGTTAGTATCATTGCAACGTGTTCCGATTAGACTACCTGAGGGTGAAGCATTACAGCATTTAACAGAGCGTGCCATGCAATGGCAAGATCGTGCACGACAAGCTATTGAAATTGAAGATGTTGCCTCAGCTTTAAAGACATTATCTACTCTGTCACAGAAAATAACAGATTCAATGGCAGATAACAAAATATCTCGAAAGCGAAGATCTCAGAATCGAACTGGTGATGGTGATGGAGAGTCTACAACTAGCTCTGAAGATGAAGATATATCCGCTGACAGTTCAATGGAACATGTATATTCTATGCCGGCACCTGTATCCACAACGACAGTAGATTCGACTTCTGATGTGAATCCGCCTAAACCGGAAACACCACTTATTCAATTAAACAAGGGTACCATAGAGACCCTAGAAGATCTTATGATGGAGGGAGATTTACTAGAAGTCTGTCTTGATGAAACATCTCACATTTGGCGAATACTTAGCGCTGCCAGGCCGTCTTCTTTCTGTTTATCTCAAAATATGTCGAAAAAGCGACGGTTAGATGACTCAGGTGAATCCACAATTATTAAGCGACCAGCCAAAATGTCTGCAAAACCAAAATCAGCTGTAAAAGATGCAAAAGCTAATGGACCTGTTACCAATAGAAAACGACGACGAGGTAGAAAAGCACAAAAGGAACAGCAAGAAACAATGACATCAGACGAAGATGATGAATGTAGTGCCGCTATCTGTGAAAAACCAACAGGTCGTGAAGTCGACTGGATTCAATGCGATGGAGAATGTAATCAGTGGTTCCACATGTTTTGTGTGGGCCTCGATAAAAATCAAGTCAAGCCAGAAGACGATTATGTGTGCAAACGATGTGAAAAAATGAATCCAAAAACTCCAACATCCACATCACCTGAAGTGACATCAACAACGTCAGCGTCAACATCGGTGATGccacaacagcaacaacagctcTCACCATCGTCTGCAGCGACTTGA
Protein Sequence
MSGLMRSSEMNNNSSGRLSPQNTSSYQTISNRSELLSETCSSGALENGNNTSSVVSPSNNENPHLRSTSTTFSLDKNEEFHFLKPSEVPVFKPNEEEFKNPLGYISKIRPVAEKFGIVKIKPPKTWTPPFAVDVDKLRFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPQVERKILDLYSLHRIVQEEGGMEQVSRDRRWSKVSLRMGYPPGKNVGATLRCHYERILHPYNIFTSGKVVDLKLESDIDDKSYRPHRIISRQQITPPNETTARRSKRFANSTATCGLGLGNVIKDEIDKIEESELEKDRAKELRRLQFYGAGPKMAGYTMRSKMAGGMNGKKKSKVVDPLAKYICYICNRGDAEESMLLCDGCDDSYHMFCLMPPLNEIPKGDWRCPKCIVEEVSKPQEAFGFEQASREYTLQQFGEMADQFKADYFNMAVHLVPTDLVEREFWRIVSSIDEDVTVEYGADLHTLDHGSGFPTKDSINLLPTDKEYAESSWNLNNLPLLEESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSSAEAFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMKAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECINHYSVLRRFCVFSHDELVCKMALDPDKLNLGIATACYLDMTEMVESEKKLRKSLLEWGVTKAERQPFELIPDDERQCESCKTTIFLSAVSCTCSKAIVCLRHYTELCECLPGNHTLKYRYTLDELPLMLKKLKVKAESFENWLSKIRNILDPNTSTNITLEELQELAQEAEDKKFPNSVLLERLKSAVLEAEKCVIVIQQLDINKIRTRSRNSGESAKYKLSLEELELFVQEIDNLCCIIKEGQSVRELLALGKEFVESAKLQLSKPINKIDEKIIERLSDEGTSLCIELHEIKALRDRQRQVNWYNRVKQFRESREKKSLSDIDALIKEGLIITPDSVIEKQLVLLQDIITSIEDWEVLAAKCLQSGSQQDLPKMELLLERAEEIQGTLPTQSSLKDAIKKTKEWLTTVEILQANENYPYFHTLENVVSRGKNIPFQLEELKTMEEHLESARHWKERAAKKFLKKEAALTLIDVLSPRSEAFITGSKVKRKTLEDHFKEEMDIAQIANFFKTAADKELDDMRELRKLNSAKNPDEDKFCVCKRKIQGQMYQCQLCRDWFHKGCVTPPRSIVRSRTANVISQSGGSDEQILQTSEKESKYLCESCTRSRRPHLQTVLSLLVSLQRVPIRLPEGEALQHLTERAMQWQDRARQAIEIEDVASALKTLSTLSQKITDSMADNKISRKRRSQNRTGDGDGESTTSSEDEDISADSSMEHVYSMPAPVSTTTVDSTSDVNPPKPETPLIQLNKGTIETLEDLMMEGDLLEVCLDETSHIWRILSAARPSSFCLSQNMSKKRRLDDSGESTIIKRPAKMSAKPKSAVKDAKANGPVTNRKRRRGRKAQKEQQETMTSDEDDECSAAICEKPTGREVDWIQCDGECNQWFHMFCVGLDKNQVKPEDDYVCKRCEKMNPKTPTSTSPEVTSTTSASTSVMPQQQQQLSPSSAAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00717514;
90% Identity
iTF_00453016;
80% Identity
-