Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963930735.1
Location
OZ005742.1:4032954-4037762[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.7e-24 6.2e-20 74.0 0.0 2 88 147 229 146 230 0.95

Sequence Information

Coding Sequence
ATGAACAACAATTCGAGTGGTAGATTATCGCCGCAAAATACCAGCTCatatcagacaatttcaaatCGAAGTGAATTATTATCAGAAACATGTAGTTCAGGCGGGTTAGAAAATGGTAACAATACTTCTAGTATTGTTTCCCCATCAAATAATGAAAATCCACACTTGCGTTCAACATCGACAACATTTTCACTTGACAAAAATGAGGAATTCCATTTCCTGAAGCCATCAGAAGTTCCCGTATTCAAACCAAATGAAGAAGAATTCAAAAATCCGCTAGGCTACATCAGTAAAATTAGGCCAGTAGCAGAAAAATTTGGAATAGTGAAAATTAAACCACCAAAAACATGGACACCTCCGTTTGCAGTAGATGTAGATAAGCTTCGTTTTACACCACGTGTCCAAAGATTGAACGAGCTTGAAGCTAAGACCAGAGTGAAGTTAAATTTCCTTGATCAGATTGCGAAATTTTGGGAATTGCAAGGATCATCTTTGAAAATTCCACAAGTTGAACGAAAAATTCTTGATTTATACTCTCTACATCGTATTGTTCAGGAAGAAGGTGGTATGGAACAGGTGTCAAGAGATCGAAGGTGGTCTAAAGTTTCTCTTAGAATGGGCTATCCGCCAGGAAAGAATGTTGGTGCAACTCTACGATGTCATTATGAAAGAATTTTGCATCCATATAACATTTTCACATCTGGTAAAGTTGTAGACTTGAAGCTTGAGTCCGATATTGATGATAAAAGTTACAGACCTCATAGGATTATATCACGGCAACAAATAACTCCACCAAACGAGACGACAGCAAGACGATCTAAAAGGTTTGCAAATAGTACTGCAACTTGTGGTCTAGGACTGGGAAATGTAATCAAAGATGAAATAGACAAAATTGAAGAATCCGAGCTTGAGAAAGATAGAGCAAAAGAATTACGACGTCTACAATTTTATGGGGCTGGACCAAAAATGGCTGGCTACACGATGAGAAGTAAAATGGCAGGTGGAATGAACGgcaagaaaaaatcaaaagttgTCGATCCACTGGCGAAATACATTTGTTATATATGCAATCGAGGGGATGCTGAAGAATCGATGCTCTTATGTGATGGCTGTGATGACAGTTATCACATGTTCTGCTTAATGCCGCCTTTAAATGAAATTCCCAAAGGAGACTGGAGATGCCCCAAATGTATTGTAGAAGAAGTAAGTAAGCCTCAAGAGGCATTTGGTTTTGAACAGGCATCACGAGAATATACACTACAGCAATTTGGTGAAATGGCAGATCAATTTAAGGCCGATTACTTTAATATGGCTGTCCACCTAGTGCCAACAGATTTAGTTGAACGAGAATTTTGGCGAATTGTTTCATCAATTGACGAAGACGTTACAGTGGAATATGGCGCCGATTTGCACACCTTAGATCATGGATCTGGATTTCCAACAAAAGATTCCATCAATCTTTTGCCCACCGATAAAGAATATGCAGAGTCCAGCTGGAATTTAAATAATCTTCCACTATTGGAGGAATCCATTTTGGGTCATATTAATGCTGACATTAGTGGCATGAAAGTCCCTTGGATGTATGTCGGAATGTGTTTTGCTACTTTTTGCTGGCACAACGAAGATCACTGGAGTTACTCAATAAATTATTTGCATTGGGGTGAGCCGAAAACTTGGTATGGAGTTCCGGGTAGCAGCGCAGAAGCATTTGAGGAAACAATGAAGAGTGCAGCACCTGAACTATTCCACTCACAGCCTGATTTACTACATCAGTTGGTTACAATAATGAATCCGAACATTCTAATGAAAGCCGGAGTCCCAGTTTATAGAACAGATCAACATGCCGGGGAATTCGTTGTCACGTTCCCTAGAGCATATCATGCTGGCTTCAATCAAGGCTATAATTTTGCAGAAGCCGTCAATTTCGCACCTGCGGATTGGTTAAAAATGGGACGAGAATGTATTAATCATTATTCAGTTTTACGACGATTCTGTGTCTTTTCGCATGATGAACTTGTTTGTAAAATGGCGTTAGATCCAGATAAATTAAACTTGGGAATTGCTACTGCATGCTACTTAGATATGACTGAAATGGTTGAATCAGAGAAGAAACTGCGTAAATCACTCTTAGAATGGGGAGTTACAAAAGCAGAACGTCAGCCATTTGAATTGATCCCAGATGATGAACGACAGTGTGAGTCTTGTAAAACCACCATATTTCTGTCGGCAGTTTCTTGTACTTGTTCTAAGGCAATCGTGTGCCTTAGACACTACACAGAATTATGCGAATGCCTGCCTGGAAATCATACACTAAAATATCGATATACTCTGGACGAACTTCCACTTATGTTGAAAAAGCTTAAAGTAAAAGCAGAAAGCTTTGAAAATTGGTTGTCGAAGATTCGAAACATTCTAGACCCGAATACATCCACGAATATAACTTTGGAGGAATTACAAGAACTAGCCCAAGAAGCTGAAGACAAAAAATTCCCCAACTCAGTTCTCTTAGAACGGCTTAAATCAGCTGTACTTGAAGCAGAAAAGTGTGTAATTGTGATCCAGCAATTAGATATAAACAAGATTCGAACAAGAAGCCGAAATTCTGGCGAATCAGCTAAGTACAAGTTGTCTTTGGAAGAACTGGAACTGTTTGTACAAGAAATCGATAATCTTTGTTGTATTATTAAAGAAGGACAAAGTGTACGAGAATTGTTAGCTTTAGGCAAAGAGTTCGTAGAGTCTGCTAAGTTGCAATTATCAAAACCAATAAACAAAATCGATGAGAAAGTAATAGAGCGGCTGAGTGATGAGGGTACCTCACTTTGCATTGAACTGCATGAAATCAAAGCTTTAAGAGATCGTCAACGTCAAGTGAATTGGTATAATCGTGTTAAGCAATTCCGAGAATCCAGAGAAAAGAAATCTCTTAGCGACATTGATGCTCTAATCAAAGAGGGGCTTATTATAACGCCCGACTCTGTTATAGAAAAGCAACTTGTTTTATTACAGGACATAATAACTTCTATTGAAGATTGGGAGGTTCTAGCAGCTAAATGCCTCCAGAGTGGTTCTCAGCAAGATTTACCAAAAATGGAACTGTTATTGGAACGTGCAGAAGAAATCCAGGGCACTCTTCCTACACAGAGTTCCCTGAAAGATGctataaaaaaaacgaaagaatgGCTTACAACGGTAGAAATTCTCCAGGCAAATGAAAACTATCCATATTTTCATACATTGGAGAATGTTGTTAGCCGTGGCAAGAACATACCCTTTCAGTTGGAAGAATTAAAGACTATGGAAGAGCATTTGGAAAGTGCCCGACACTGGAAGGAACGTGCCGCGAAGAAGTTTCTAAAAAAGGAGGCTGCTCTTACACTTATCGACGTATTGTCACCACGCTCAGAGGCTTTTATTACCGGCTCTAAGGTAAAAAGGAAAACTTTAGAAGATCATTTTAAAGAAGAGATGGATATTGCTCAAATAGCGAATTTCTTTAAAACCGCCGCTGACAAAGAGCTGGATGACATGCGAGAGCTAAGAAAATTCAATTCAGCCAAAAATCCAGACGAAGATAAATTCTGTGTATGCAAGCGCAAGATTCAAGGACAAATGTATCAATGCCAATTATGCAGAGATTGGTTCCATAAGGGATGTGTTACGCCGCCTAGAAGCATTGTTCGTTCCCGTACTGCCAATGTTATTTCACAATCTGGTGGTTCAGATGAACAGATACTTCAAACTTCCGAAAAAGAATCAAAGTATTTGTGCGAATCATGTACACGATCACGGCGACCGCATCTACAAACTGTTCTATCTTTGTTAGTATCATTGCAACGTGTTCCGATTAGATTACCTGAGGGTGAAGCATTACAGCATTTAACAGAGCGTGCCATGCAATGGCAAGATCGTGCACGACAAGCTATTGAAATTGAAGATGTTGCCTCAGCTTTAAAGACATTATCTACTCTGTCACAGAAAATAACAGATTCAATGGCAGATAACAAAAGCTCTCGAAAGCGAAGATCTCAGAATCGAACTGGTGATGGTGATGGAGAGTCTACAACTAGCTCTGAAGATGAAGATATATCCGCTGACAGTTCAATGGAACACGTATATTCTATGCCGGCACCTGTATCCACAACAACAGTAGATTCGACTTCTGATGTGAATCCGCCTAAACCGGAAACACCACTTATTCAATTAAACAAGGGTACCATAGAGACCCTAGAAGATCTTATGATGGAGGGAGATTTACTAGAAGTCTGTCTTGATGAAACATCTCACATTTGGCGAATACTTAGCGCTGCCAGGCCGTCTTCTTTCTGTTTATCTCAAAATATGTCGAAAAAGCGACGGTTAGATGACTCAGGTGAATCCACAATTATTAAGCGACCAGCCAAAATGTCTGCAAAACCAAAATCAGCTGTAAAAGATCCAAAAGCTAATGGAGCTGTTACCAATAGAAAACGAAGACGAGGCAGAAAAGCACAAAAGGAACAGCAAGAAACAATGACATCAGACGAAGATGATGAATGCAGTGCCGCTATCTGTGAAAAACCAACAGGTCGTGAAGTCGATTGGATTCAATGCGATGGAGAATGTAATCAGTGGTTCCACATGTTTTGCGTGGGTCTCGATAAGAATCAAGTCAAGCCAGAAGACGATTATGTGTGCAAACGATGTGAAAAAATGAATCAAAAAACTCCAACACCCACATCACCAGAAGTGACATCAACAACGTCAGCGTCAACATCGGTGATGccacaacagcaacaacagctcTCACCATCGTCTGCAGCGACTTGA
Protein Sequence
MNNNSSGRLSPQNTSSYQTISNRSELLSETCSSGGLENGNNTSSIVSPSNNENPHLRSTSTTFSLDKNEEFHFLKPSEVPVFKPNEEEFKNPLGYISKIRPVAEKFGIVKIKPPKTWTPPFAVDVDKLRFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPQVERKILDLYSLHRIVQEEGGMEQVSRDRRWSKVSLRMGYPPGKNVGATLRCHYERILHPYNIFTSGKVVDLKLESDIDDKSYRPHRIISRQQITPPNETTARRSKRFANSTATCGLGLGNVIKDEIDKIEESELEKDRAKELRRLQFYGAGPKMAGYTMRSKMAGGMNGKKKSKVVDPLAKYICYICNRGDAEESMLLCDGCDDSYHMFCLMPPLNEIPKGDWRCPKCIVEEVSKPQEAFGFEQASREYTLQQFGEMADQFKADYFNMAVHLVPTDLVEREFWRIVSSIDEDVTVEYGADLHTLDHGSGFPTKDSINLLPTDKEYAESSWNLNNLPLLEESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSSAEAFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMKAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECINHYSVLRRFCVFSHDELVCKMALDPDKLNLGIATACYLDMTEMVESEKKLRKSLLEWGVTKAERQPFELIPDDERQCESCKTTIFLSAVSCTCSKAIVCLRHYTELCECLPGNHTLKYRYTLDELPLMLKKLKVKAESFENWLSKIRNILDPNTSTNITLEELQELAQEAEDKKFPNSVLLERLKSAVLEAEKCVIVIQQLDINKIRTRSRNSGESAKYKLSLEELELFVQEIDNLCCIIKEGQSVRELLALGKEFVESAKLQLSKPINKIDEKVIERLSDEGTSLCIELHEIKALRDRQRQVNWYNRVKQFRESREKKSLSDIDALIKEGLIITPDSVIEKQLVLLQDIITSIEDWEVLAAKCLQSGSQQDLPKMELLLERAEEIQGTLPTQSSLKDAIKKTKEWLTTVEILQANENYPYFHTLENVVSRGKNIPFQLEELKTMEEHLESARHWKERAAKKFLKKEAALTLIDVLSPRSEAFITGSKVKRKTLEDHFKEEMDIAQIANFFKTAADKELDDMRELRKFNSAKNPDEDKFCVCKRKIQGQMYQCQLCRDWFHKGCVTPPRSIVRSRTANVISQSGGSDEQILQTSEKESKYLCESCTRSRRPHLQTVLSLLVSLQRVPIRLPEGEALQHLTERAMQWQDRARQAIEIEDVASALKTLSTLSQKITDSMADNKSSRKRRSQNRTGDGDGESTTSSEDEDISADSSMEHVYSMPAPVSTTTVDSTSDVNPPKPETPLIQLNKGTIETLEDLMMEGDLLEVCLDETSHIWRILSAARPSSFCLSQNMSKKRRLDDSGESTIIKRPAKMSAKPKSAVKDPKANGAVTNRKRRRGRKAQKEQQETMTSDEDDECSAAICEKPTGREVDWIQCDGECNQWFHMFCVGLDKNQVKPEDDYVCKRCEKMNQKTPTPTSPEVTSTTSASTSVMPQQQQQLSPSSAAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00717514;
90% Identity
iTF_00454315;
80% Identity
-