Basic Information

Gene Symbol
Arid2
Assembly
GCA_963924295.1
Location
OZ002740.1:326380340-326396585[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.2e-24 8.1e-20 73.6 0.0 2 89 45 130 44 130 0.95
2 2 0.23 4.3e+03 0.8 0.0 29 60 670 700 640 728 0.73

Sequence Information

Coding Sequence
ATGACGACTACTGAAATCAAGGAGGAGCCCGGTATCACTGTAACACCACAAAATGACGATAGCACAAGCAATGTAAGCAAAACAACTGCAAGAAAATCTGCCCGCGTTGAGCCTGTATATGATCACCGTGACAAGGAGACATTCTACAAAGATTTAATAACTTTTCATGAAAATCGAAGtactcCAATTACTAGAATTCCAAAAATCAATGGTTTGGAAGTGGACTTGCACAAGCTTTATGGTGAGGTTATATCTAAAGGTGGTTGGCTTAAAGTCAACATACGGAACGAATGGGAAGAACTACTTCCAGTGCTTGGCCTTAAACATAAATGTGTTAATGCATCAGTTGCGCTGAAGCACATTTACACACGATATTTAGACAAATTCGAACGAGCCAACTTCTTGGGAGAAGATCCAGATAAGAATGACGATCCCGAAGAGGAAGGACGACACAAAAAGTGGTCTTCGAAGAGTTTTCACTCGGTTCCTATGACATATAATTataatcagcataatgtcgcagAGCAGGTCAGAGTTATTCATAAACTGTCAACGGATCTTTACAAGGGTTCAGAGTATGAAAAGCTTTTGTTAGCTCTAATGTCCCCTCTACCGAATGAACAGGACTTTGCAATAAATGTGTGCACTCTGATGGCTAATGAAAGCAAACATACGCTTAAAGTTGATCATTGTCCCAAGTTATTGGACGCCTTAATAGCACATGCTGGAGTTTATTGTCACTtttccATGAGAGACTTGTTTTACGAACTTTACACAAAAATACGTCATCATTCTTTACAGTCGTTCTGGAATGACTTACTTCATGATAAACCACAAATTTTAGAGCTGTCATATGACGATTACTTCCAATCACCAGAGGAAAAATTTgtagttgatacaggagcaggtCGACCACCACTTCGTTTACCACCAAGAGAAGAATTCCAAGATGGTCTGAATGCTACACGTGAGGATCTGCGCGCAGATGTATTCAGATTAAATTTTCTAGCCTTAGGTCGGGGGCTTGGAACTCATGACTATATTGGTCAAAGGGTAAATCAAGTTTCTTCAATCATTCGCAATTTAAGCTTTTTCGAAGAAAATGCACAAACATTAGCCAAAAATAGGACATTTATTCGATTTTTGGTGATGTGTTCGAACATCCGTTGGGGAAATATTCACCATATGGCTTTGGACGTATGCGGTAATATAGCAACTGAGTTGGAATTATCGGATCCAACTTCAGATGATCTTACTCGTTGTTTGATGTCAACAGTTTGTGAAGGTTTAGAAGGTCACGATAGAGGAATTATAATCAGTAGTTTGGAAATTCTTTACAAATTATCTCAGAGGGAGAGCAATGATGAACATATTCATAAGTGTTTGGATCAAAAAGTTTACAATCAAATCTGCTTATTTCTATCTTTGAACGATATTATGTTGCTATTGTACACTTTAGAATGTATTTATGCTCTGAGCTCGTTAGGGCATAGATCTTGTAATCAATTGATACAAGTAAGAGGTATCGTGGATACACTTGTTTCGCTTATTACTGTAGAGgCTCAAAGTTATGGTCCGGATGGCTGCGTATTAATGCGAGTTGTTGAGACTGTCCCTGGAAATATGCTACCAATGGTGGcacaaaatattgcaaaattgCAAACGGCAGCGATGGCAGGGCAAGTTGGTGATCATCACATGCAGCAAACAGTATCTCAAAATCAACAAGAATCTATTTCTCTAAGTAATTCAGAATCTCAAAAAGAGCAAATTTCAACAATTGAAAACAATCTAACTAGCGTTATTCCCCAACCACAAGCAAACATTCGTGTTGTCCAGACGTCGCAGACAGCTACAGCTTCTGGTACACAACCGAATTCCCCTCAGACACCAAATTCCACTCCCGTTAAAGTTACACAACATCAACTAGTTCAAGAAGCTGAACAGTTCACCAGTgcttggctttcagctaatttcGAAGTAGTACCTTCTGTTGCAAGTCGTATTGAGCAACAGGATTTATATAAAATGTACCTTGCAGCAGCTCAAAAAAATGGACGTCGTTGTGTAACTCAAGCTAGTTTTCCCCGTATAGTACGAATCACTTTTGGCTCACAAAGTGGTCCAACACTAGTGAAAACGACAGAATCTAATGGAGGTACTGCAAGTACTTACTATTACATTCGACTTCGAGCAAGAGCAAATCCATTACCGATACAAATAAAAACTATCACAACTCCATCAAATAGCCCTGCTGCAACAAAAACACCAAAAGGTTCGTCGAAACAAAGTTCAAAACAAGGCAATGAGGTGATAATAAAAACCAAGCCTGAATTGGGTCAAAAACTGAAACAACCTAAAAAAACTcaaatgcaattaaaacaaatacaGCTAGTGAAAACGCAAGTCCAACCTGGTCAGTCAGCTCAGCAATCTGTTCCATTACAGCAATCAGCTCAGACACAACAATGCAGCTTAATAAATCCCAATATATTCCAACAGCAATCGACTCAGTCACAACAAATTCTGGGTTCACAGACGGCAGATAAGCTTCCTGCTGCTAAGCTACCTGGAAAAAATATCATCATGAATAAAACTACAATTgctaCACCTCATCAAACTACGCAACAAGTTGCTGCCAGCCCGGGAACAACAGTTATCACACATACACCCAATCAAAGCAACACTATGCCACAACACCAACAACATAATCTACAACCCACCATAAAAAATGCTGCTGTTATACAAACTTCAGTTGCCACTCATCCTGGCACAAACGGAAACGGTGCTGCTAGTTCTCTAATAAAAAGCCTCTTGGCCAATAAGGTAACACCAACTGCTACTGAAGTATCCGAATCGAATGTGAGTGCAGCTCCAAATAATCCAAGTTGTTTGATTACCCAAAATGTTAATATGCATCAGGTAGCGCAACGTCAgcatttacaaaaacaaaaagaactcgCTCAACAGCAACAGcaccaacaacagcagcaacaacaacaacagcaacaagcCGTCGTTGTATCAAATATCAAAGCTTCAACTGCAATGACATTACCAACAACAACAATTAGTGCTTTAGTCAATAATCCAATTATACAATCACCTTCAGTTAAAGTTGGTCAAACAACAATAAAAGCCATAAATTCAAATACCGTTATACCGGCAGCagtaattgaaaagaaaaatcaaaatcaaaatatcgCTTGCGAAATTATCACGGAGAATGCATCTTGGGAGCCTGTACCACCGCCAATGCCCGTCAGTGGAATTACTCGTCCACAAAATACTAATATCATCATTGGAGTTAGTAGTGAAGATTCGAATTCAACAGGTAACAATTCGATAGCTTCGAGTATTATAAGCTCAGCTCAAGTGAACACAACTGACGAAGGAGAAGGATCAGAGATTAGCTTTGAAGGACTTTTAATACCAAAATCAAAGTCGGGCAGCTCATCAATAATTATTGAAGATGAAAGTTCTAAAGATTCCATCAATAAATCATCTCTTGTCGTACATGCAAATCAAATGTTAGCAGATTTATTAGATAAAAAATCACCAGATCCACCAATGAATTCAGGGATCAAAAGAAAACTGGACGATGACTCTGAGGAAAACGCAAGTAAGAGACCAGCTGTAGAAATTGATTTAACTCTTGATTATGATGAGGAAATTAAGGTGACTCCATCCAAAAATGCAGCAAATTTGTATGCTGAAATGGCAGCATCGATTTTGGAAGATGAAGATTTAGAAGAAGAACCACAAATTCAATCTTTAATTCAGCAGCACCAACAACAAATTTCAGTTCCACCACTCCAAACACAAATGTCAACTCAAATGCATCAGCAGCAACAACAAATCCAGGCACAAATTCAATCCCAAATGCCACATCATCAACTACAAAATCAAGTTCAAACTCAGATACAAACTCCAGTCATTCAGAAGACAGCAGACGCTCAGAAACAATTAATTACAATGCCAATGCCACTTCAACGTCAAATAATTGTAGCACCGAATAGCCCACATCAAATGATTTTATCTCAAGCATCTTCAGGAAATCAACCTGTACAAACCCAAGCAACTGCGACAATTAAAACTGAGACAGGACTGCAAACAGTTCCATTGATTCTTCAAAAACAAGTTGGCCCAGGCGGACAACAAATCATACAACCAGTCATTCAGTCATCTCAGCCGCAAACTCAGTATGTGTTAGCTACGAATCCCCAAGGGCAAACATATTTAGTTGCACAACAGCCTCAGCCTACGCAAACAGTATTAGTCACACAGACTCCACAGCAGCAAGGCACACCCAGTAAAACGATAATTATTTTACAACAGCAAGGCGGTCCGTCACAAGCTGTTGCTGCACAACAACAAATTCTTGGAACAAGTGGAACTCCACAAAAAGTTATAATGACTACCCCACAAGGACAACAAATGATTGTCACTCAAGTGCCTAGACCTATGCAACATCAAATCGTTATGAATCATCCAACTACAAGTTCCATGCAAACAAACGCATCACAAAATGTGGTTCTTTCGCAATCTCAATCACCTCTTCATCAGCAACATCAAATGCAGCAACATATGCAAGTGCAGAATCAATTTCAATCACAGCAACATATTCAAACGCAGCAACATAATATTCAAGCGCAGCAACATAATATTCAAACACAGCAGCATAATATTCAAACGCAGCAGCATATCCAAACGCAGCCCCATCAACAAATGCAAAAACAGATTCAAATTCTAGCGACACCCCAAGTTCAAAATAATCCTCAGCAACAACAGCAGACTGAAAAAAATGTCTTGTCGCAGTTGCCTCATATTCCGGCCACTATAAAATTGCATCCACATCAAACGCAAAATACACAGACGCAAACAATTCCTAAAGCTTTGCCCGCAAAATCACCGGTGGCAAcagtacaacaacaacagcaacaacttCAAACACCAGTTCCCATGGTTACTCAACAGCTGCAGCAACAACCTCCAATACAACAGCAGGCAATACAGAATCATTCCAAATTATCAGAGCGGAGAATGTTCATTGGCGGGAATGGCGGAAATATTGATATAGGTGATGGATCACAGCAGATACCTGTGATTGGTTCGGTAACATCAGGCACCCAGACAATCATTACGCAAcctcaacaacaacagcagcaacagacTCAATCGCCTGTAGTTCAACAATCACCTCATCAATCTCTAACCTCAATTCCTCCAGTAGTTGCTACACATCAAACTCCAGCTATAATagctccaccaccaccaccacctccaccaccgccacctGCAAAACCATCTAAAACCCTTGCTGATATTAAATCTGACGAAGAATTGATAGATTCGAATTGGATGTGGGTTTGCGATTGGAGAAATTGTCCCAGGAAAAAGTTTAAATCATTAAATGATGTATATCGGCATGCATGCATTGTACATTGCCCCGAATCATTGGACCCAAGCGCAGAAATTTATTGCCAATGGGGTCCCGGTCCAGGTCTATGCGACAGTATTCCACGAAAGAGGTTCTCACTAATGACACATTTGTTAGATCGTCACTGCACTACTGAAGCATTTAAAGCAGCCGTTCAAAGACGCATTGCAACAGGTATACAACCGAGCATTCACACAACACCTGTCACCATTATCAAAAATGCACAGGCTCCTGTTTCTAGTGCAGCAAATTCAGAATGCAGAGGTACAGCATCCCCAGCACTTTCTACATCCTCCACTAGCTCTCTTCCACCTGCTGCTAGCGCTGCTATGCACGCAATTAAGAGGCATACATCAGATTTCGCCAATCCAAAGGAGTTGATGGATGAGAATGAAGGTCCTGTTACTAAAAGTATTCGACTAACAGCAGCTCTAATTTTACGAAACTTGGTGACATACACAACAACAGCTAAAAAaaatGTGCGCTGCTACGAACCACACTTAGCCGGAGTAGCTTTGAGCAATGTTGAGTCAAGTCAAGCTATCTCTCAAATTTTGTACGAAATGAACAATTAG
Protein Sequence
MTTTEIKEEPGITVTPQNDDSTSNVSKTTARKSARVEPVYDHRDKETFYKDLITFHENRSTPITRIPKINGLEVDLHKLYGEVISKGGWLKVNIRNEWEELLPVLGLKHKCVNASVALKHIYTRYLDKFERANFLGEDPDKNDDPEEEGRHKKWSSKSFHSVPMTYNYNQHNVAEQVRVIHKLSTDLYKGSEYEKLLLALMSPLPNEQDFAINVCTLMANESKHTLKVDHCPKLLDALIAHAGVYCHFSMRDLFYELYTKIRHHSLQSFWNDLLHDKPQILELSYDDYFQSPEEKFVVDTGAGRPPLRLPPREEFQDGLNATREDLRADVFRLNFLALGRGLGTHDYIGQRVNQVSSIIRNLSFFEENAQTLAKNRTFIRFLVMCSNIRWGNIHHMALDVCGNIATELELSDPTSDDLTRCLMSTVCEGLEGHDRGIIISSLEILYKLSQRESNDEHIHKCLDQKVYNQICLFLSLNDIMLLLYTLECIYALSSLGHRSCNQLIQVRGIVDTLVSLITVEAQSYGPDGCVLMRVVETVPGNMLPMVAQNIAKLQTAAMAGQVGDHHMQQTVSQNQQESISLSNSESQKEQISTIENNLTSVIPQPQANIRVVQTSQTATASGTQPNSPQTPNSTPVKVTQHQLVQEAEQFTSAWLSANFEVVPSVASRIEQQDLYKMYLAAAQKNGRRCVTQASFPRIVRITFGSQSGPTLVKTTESNGGTASTYYYIRLRARANPLPIQIKTITTPSNSPAATKTPKGSSKQSSKQGNEVIIKTKPELGQKLKQPKKTQMQLKQIQLVKTQVQPGQSAQQSVPLQQSAQTQQCSLINPNIFQQQSTQSQQILGSQTADKLPAAKLPGKNIIMNKTTIATPHQTTQQVAASPGTTVITHTPNQSNTMPQHQQHNLQPTIKNAAVIQTSVATHPGTNGNGAASSLIKSLLANKVTPTATEVSESNVSAAPNNPSCLITQNVNMHQVAQRQHLQKQKELAQQQQHQQQQQQQQQQQAVVVSNIKASTAMTLPTTTISALVNNPIIQSPSVKVGQTTIKAINSNTVIPAAVIEKKNQNQNIACEIITENASWEPVPPPMPVSGITRPQNTNIIIGVSSEDSNSTGNNSIASSIISSAQVNTTDEGEGSEISFEGLLIPKSKSGSSSIIIEDESSKDSINKSSLVVHANQMLADLLDKKSPDPPMNSGIKRKLDDDSEENASKRPAVEIDLTLDYDEEIKVTPSKNAANLYAEMAASILEDEDLEEEPQIQSLIQQHQQQISVPPLQTQMSTQMHQQQQQIQAQIQSQMPHHQLQNQVQTQIQTPVIQKTADAQKQLITMPMPLQRQIIVAPNSPHQMILSQASSGNQPVQTQATATIKTETGLQTVPLILQKQVGPGGQQIIQPVIQSSQPQTQYVLATNPQGQTYLVAQQPQPTQTVLVTQTPQQQGTPSKTIIILQQQGGPSQAVAAQQQILGTSGTPQKVIMTTPQGQQMIVTQVPRPMQHQIVMNHPTTSSMQTNASQNVVLSQSQSPLHQQHQMQQHMQVQNQFQSQQHIQTQQHNIQAQQHNIQTQQHNIQTQQHIQTQPHQQMQKQIQILATPQVQNNPQQQQQTEKNVLSQLPHIPATIKLHPHQTQNTQTQTIPKALPAKSPVATVQQQQQQLQTPVPMVTQQLQQQPPIQQQAIQNHSKLSERRMFIGGNGGNIDIGDGSQQIPVIGSVTSGTQTIITQPQQQQQQQTQSPVVQQSPHQSLTSIPPVVATHQTPAIIAPPPPPPPPPPPAKPSKTLADIKSDEELIDSNWMWVCDWRNCPRKKFKSLNDVYRHACIVHCPESLDPSAEIYCQWGPGPGLCDSIPRKRFSLMTHLLDRHCTTEAFKAAVQRRIATGIQPSIHTTPVTIIKNAQAPVSSAANSECRGTASPALSTSSTSSLPPAASAAMHAIKRHTSDFANPKELMDENEGPVTKSIRLTAALILRNLVTYTTTAKKNVRCYEPHLAGVALSNVESSQAISQILYEMNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00453015;
90% Identity
iTF_00453015;
80% Identity
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