Basic Information

Gene Symbol
Arid2
Assembly
GCA_963930735.1
Location
OZ005740.1:304112219-304129186[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.1e-24 1.2e-19 73.1 0.0 2 89 46 131 45 131 0.95
2 2 0.26 3.4e+03 1.1 0.0 30 62 672 703 642 731 0.69

Sequence Information

Coding Sequence
ATGACGACTACTGAAATCAAGGAGGAACCCGGTATCACTGTAACACCACACAATGACGATAGCACAAGCAATGTAAGCAAAACAACTACTGCAAGAAAATCTGCCCGCGTTGAGCCTGTATATGATCACCGTGACAAGCAGACATTCTACAAAGATTTAATaagttttcatgaaaatcgaagtacTCCAATCACAAGAATTCCAAAAATCAATGGTTTGGAAGTGGATTTGCACAAGCTTTATGGTGAGGTTATATCTAAAGGTGGTTGGCTTAAAGTCAACATACGGAACGAATGGGAAGAGCTGCTTCCAGTGCTTGGTCTTAAACATAAATGTGTTAATGCATCGGTTGCGCTGAAGCATATTTACACACGATATTTAGACAAATTCGAACGAGCCAACTTCTTGGGAGAAGATCCAGATAAGAATGACGATCCCGAAGAGGAAGGACGACACAAAAAGTGGTCTTCAAAGAGTTTTCACTCGGTTCCTATGACATATAATTataatcagcataatgtcgcagAGCAGGTCAGAGTTATCCATAAGCTGTCAACTGATCTATACAAAGGTTCAGAGTATGAAAAGCTTTTGTTAGCTCTAATGTCCCCTCTACCAAATGAGCAGGACTTTGCAATAAATGTTTGCACTCTGATGGCTAATGAAAGCAAACATACGCTTAAAGTCGATCATTGTCCCAAGTTATTGGACGCCTTAATAGCACATGCTGGAGTTTATTGTCACTtttccaTGAGGGACTTGTTTTATGAACTTTACACAAAAATACGTCATCATTCTTTACAGTCGTTCTGGAATGACTTACTTCATGATAAACCGCAAATTTTAGAGCTATCATATGACGATTACTTCCAATCACCGGAGGAAAAATTTGTAGTCGATACTGGAGCAGGTCGACCACCACTTCGTTTACCACCAAGAGAAGAATTCCAAGACGGTCTGAATGCTACACGCGACGATCTGCGCGCAGATGTATTCAGATTAAATTTTCTAGCATTAGGTCGGGGGCTTGGAACCCATGACTATATTGGTCAAAGGGTAAATCAAGTTTCTTCAATCATTCGCAATTTAAGCTTTTTCGAAGAAAATGCACAAACATTAGCCAAAAATAGGACATTTATTCGATTTTTGGTGATGTGTTCGAACATCCGCTGGGGAAATATCCACCATATGGCTTTGGACGTATGCGGTAATATAGCAACTGAGTTGGAATTATCAGATCCAACTTCAGATGATCTTACCCGTTGTTTGATGTCAACAGTTTGTGAAGGTTTAGAAGGTCACGATAGAGGAATTATAATCAGTAGCTTGGAAATTCTTTACAAACTATCTCAGAGGGAGAGCAATGATGAACATATTCATAAGTGTTTGGATCAAAAAGTTTATAATCAAATCTGCTTATTTCTATCTTTGAACGATATTATGTTGCTATTGTATACTTTAGAATGTATTTATGCTCTGAGTTCGTTAGGGCATAGATCTTGTAATCAATTGATACAAGTAAGAGGTATCGTGGATACACTTGTGTCGCTTATTACTGTAGAGGCTCAAAGCTATGGTCCAGATGGCTGCGTATTGATGCGAGTTGTTGAGACGGTGCCTGGAAATATGCTACCAATGGTGGcacaaaatattgcaaaattgcaaaCCGCAGCGATGGCAGGGCAAGTTGGTGATCATCACATGCAGCAAACAGTATCTCAAAATCAACAAGAACCTATTACTCTAAGTAATTCAGAATCTCAAAAAGAGCAAATTTCAACAATTGAAAACAATCTAACATGCGTTGTACCTCAACCACAAGCCAACGTTCGCGTTGTCCAAACGTCGCAGCCAGCTACAGCTTCTGGTACACAACCGAATTCCCCTCAGACACCAAATCCTACTCCCGTTAAAGTTACACAACATCAACTAGTTCAAgAAGCTGAACAGTTCACCAGTgcttggctttcagctaatttcGAAGTTGTACCTTCTGTTGCAAGCCGTATTGACCAACAGGATTTATATAAAATGTACCTTGCAGCAGCTCAAAAAAACGGCCGTCGTTGTGTAACTCAAGCTAGTTTTCCCCGTATAGTACGAATCACTTTTGGCTCACAAAGTGGTCCAACACTGGTGAAAACGACAGAATCCAATGGAAGTACCGCAAGTACTTACTATTACATTCGACTTCGTGCAAGAGCAAATCCATTACCGATACAAATAAAAACTATCACAACTCCATCAAATAGCCCTGCTGCAACAAAAACACCAAAAGGTTCGTCGAAACAAAGTTTAAAACAAGGCAATGAGGTGATAATAAAAACTAAGCCTGAATTGGGTCAAAAACTGAAACAACCTAAAAAAACTCAAATCCAATTAAAACAAGTACAGTTATCGAAAACGCAAGTCCAACCTGGTCAGTCAGTTCAGCAATCTGTTCCATTACAGCAATCAGCTCAGACACAACAATGCAGCTTAAAAAATCCCAATATATTTCAACAGCAATCGAGTCAGTCTCAACAAATTCTGGGTTCACAGACGCCAGATAAACTTCCCGCTGCTAAACTGCCTGGAAAGAATATCATCATGAATAAAACTACAATTgcTACACCTCATCAAATTACGCAACAAGTTGTAGCTGCTAGCCCGGGAACAACAGTTATCACACATACACCCAATCAAATCAGCACTATGCCACAACACCAACAACATAATCTACAACCCACCACAAAAAATGCTGCTGTTATACAAACCTCTGTTGCCACTCACCCTGGCACAAACGGAAACGGTGCTGCTAGTTCTCTAATAAAAAGCCTCTTGGCCAATAAGGTAACACCAACTGCTACTGAAGTATCCGAATCGAATGTGAGTGCAGCTCCAAATAATCCAAGTTGTTTGATTACCCAAAATGTTAATATGCATCAGgTAGCGCAACGTCAgcatttacaaaaacaaaaagaactcgCGCAAcagcaccaacaacaacaacagcaacaacaacagcagcagcaacaagcCGTCGTTGTATCAAATATCAAAGCTTCAACTGCAATGACATTACCAACAACAACCATTAGTGCTTTAGTCAATAATCCAATTATACAATCACCTTCAGTTAAAGTTGGTCAAACAACGATAAAAGCCATAAATTCAAATACTGTTATACCAGCAGCagtaattgaaaagaaaaatcaaaatcaaaatatggcttgCGAAATTATCACGGAGAATGCATCTTGGGAGCCTGTACCACCATCAATGCCCGTCAGTGGGATTACTCGTCCACAAAATACTAATATAATCATTGGAGTTAGTAGTGAAGATTCGAATTCAACAGGTAACAATTCGATAGCTTCGAGTATTATAAGCTCAGCTCAAGTGAATACAACTGACGAAGGAGAAGGATCAGAGATTAGCTTTGAAGGACTTTTAATACCAAAATCAAAGTCGGGCAGCTCATCAATAATTATTGAAGATGAAAGTTCTAAAGATTCTATCAATAAATCATCTCTTGTCGTACATGCAAATCAAATGTTAGCAGATTTATTAGATAAAAAATCACCAGATCCACCAATGAATTCAGGGATCAAAAGAAAACTGGACGATGATTCTGAGGAAAACGCAAGTAAGAGACCAGCTGTAGAAATTGATTTAACTCTTGATTATGATGAGGAAATTAAGGTGACTCCATCAAAAAATGCAGCAAATTTGTATGCTGAAATGGCAGCATCGATTTTGGAAGATGAAGATTTAGAAGAAGAGCCACAAATTCAATCTTTAATTCAGCAGCACCAccaacaaatttcaattccgccactACAAACACAAATGTCAACTCAAATgcatcagcaacaacaacaaatccAGGCACAAATTCAATCCCAAATGCCACATCATCAACTACAAAATCAAGTTCAAACTCAGATACAAACTCCAGTCATTCAGAAGACAGCAGATGCTCAGAAACAATTAATTACAATGCCAATGCCACTTCAACGTCAAATAATTGTAGCACCGAATAGCCCACATCAAATGATCTTATCTCAAGCATCTTCAGGAAATCAACCTGTACAAACTCAAGCAACTGCTACAATTAAAACTGATACAGGACTGCAAACAGTTCCGTTGATTCTTCAAAAACAAGTTGGCCCAGGCGGACAACAAATCATACAACCAGTCATTCAGTCATCTCAGCCGCAAACTCAGTATGTGTTAGCTACAAATCCCCAAGGGCAAACATATTTAGTTGCACAACAGCCTCAGCCTACGCAAACAGTATTAGTCACACAGACTCCACAGCAGCAAGGCACCCCCAGTAAAACGATAATTATTTTACAACAGCAAGGCGGTCCGTCACAAGCTGTTGGTGCACAACAACAAATTCTTGGAACAAGTGGAACTCCACAAAAAGTTATAATGACTACCCCACAAGGACAGCAAATGATTGTCACTCAAGTGCCTAGACCTATGCAACATCAAATCGTTATGAATCATCCAACTACAAGTTCTATTCAAACAAACGCATCACAAAATGTGGTTCTTTCGCAATCTCAATCACCTCTTCATCAGCAACATCAAATGCAGCAACATATGCAAGTGCAGAATCAATTTCAACCACAGCAACATATTCAAACGCAGCAACATAATATTCAAGCGCAGCAACATAATATTCAAACGCAGCAACATAATATTCAAACGCAGCAACATAATATTCAAACGCAGCAACATATCCAAACGCAGCCCCATCAGCAGATGCAAAAACAGATTCAAATTTTAGCGACACCTCAAGTTCAAAATAATCctcagcaacagcaacaacagcagacTGAAAAAAATGTCTTGTCCCAGTTGCCTCATATTCCGGCCACTATAAAATTGCATCCCCACCAAACGCAAAATACACAGACGCAAACAATTCCTAAAGCTTTGCCTGCAAAATCACCAGTGGCaacagtacaacaacaacaacaacaacaacaacaacttcaAACACCAGTTCCCGTGGTTACTCAACAACAACAACCTCCAATACAACAGCACACAATACAGAATCATTCCAAATTACCAGATCGGAGACTCTTCATTGGTGGGAATGGCGGAAATATTGATATAGGTGATGGATCACAGCAGATACCTGTGATTGGTTCGGTAACATCAGGCACCCAGACAATCATTACGCAAcctcaacaacaacagcagcaacagatTCAATCGCCAGTAGTTCAACAATCACCTCATCAATCTCTAACCTCAATTCCTCCCGTAGTTGCTACACATCAAACTCCAGCTATAATagctccaccaccaccacccccaccaccgCCACCTGCAAAACCATCTAAAACTCTTGCTGATATAAAATCTGATGAAGAATTGATAGATTCGAATTGGATGTGGGTTTGCGATTGGAGAAATTGTCCCAGGAAGAAGTTTAAATCATTAAATGATGTATATCGGCATGCATGCATTGTACATTGCCCCGAATCATTGGACCCAAGCGCAGAAATTTATTGCCAGTGGGGTCCCGGTCCAGGTCTATGCGACAGTATTCCACGAAAGAGGTTCTCACTAATGACGCATTTGTTAGATCGTCACTGCACTACTGAAGCATTTAAAGCAGCCGTTCAAAGACGCATTGCGACAGGTATACAACCAAGCATTCACACAACACCTGTCACCATTATCAAAAATGCACAGGCTCCTGTTTCTAGTGCAACAAATTCGGAATGCAGAGGTACAGCATCGCCAGCGCTTTCTACATCATCCACTAGCTCTCTTCCACCTGCAGCTAGTGCTGCTATGCACGCAATTAAGAGGCATACATCGGATTTCGCCAATCCAAAGGAGTTGATGGATGAGAATGAAGGTCCTGTTACTAAAAGTATTCGACTAACAGCAGCTCTAATTTTACGAAACTTGGTGACATACACAACAACAGCTAAAAAaaatGTGCGCTGCTACGAACCACACTTAGCCGGAGTAGCTTTGAGCAATGTTGAGTCAAGTCAAGCTATCTCTCAAATTTTGTACGAAATGAACAATTAG
Protein Sequence
MTTTEIKEEPGITVTPHNDDSTSNVSKTTTARKSARVEPVYDHRDKQTFYKDLISFHENRSTPITRIPKINGLEVDLHKLYGEVISKGGWLKVNIRNEWEELLPVLGLKHKCVNASVALKHIYTRYLDKFERANFLGEDPDKNDDPEEEGRHKKWSSKSFHSVPMTYNYNQHNVAEQVRVIHKLSTDLYKGSEYEKLLLALMSPLPNEQDFAINVCTLMANESKHTLKVDHCPKLLDALIAHAGVYCHFSMRDLFYELYTKIRHHSLQSFWNDLLHDKPQILELSYDDYFQSPEEKFVVDTGAGRPPLRLPPREEFQDGLNATRDDLRADVFRLNFLALGRGLGTHDYIGQRVNQVSSIIRNLSFFEENAQTLAKNRTFIRFLVMCSNIRWGNIHHMALDVCGNIATELELSDPTSDDLTRCLMSTVCEGLEGHDRGIIISSLEILYKLSQRESNDEHIHKCLDQKVYNQICLFLSLNDIMLLLYTLECIYALSSLGHRSCNQLIQVRGIVDTLVSLITVEAQSYGPDGCVLMRVVETVPGNMLPMVAQNIAKLQTAAMAGQVGDHHMQQTVSQNQQEPITLSNSESQKEQISTIENNLTCVVPQPQANVRVVQTSQPATASGTQPNSPQTPNPTPVKVTQHQLVQEAEQFTSAWLSANFEVVPSVASRIDQQDLYKMYLAAAQKNGRRCVTQASFPRIVRITFGSQSGPTLVKTTESNGSTASTYYYIRLRARANPLPIQIKTITTPSNSPAATKTPKGSSKQSLKQGNEVIIKTKPELGQKLKQPKKTQIQLKQVQLSKTQVQPGQSVQQSVPLQQSAQTQQCSLKNPNIFQQQSSQSQQILGSQTPDKLPAAKLPGKNIIMNKTTIATPHQITQQVVAASPGTTVITHTPNQISTMPQHQQHNLQPTTKNAAVIQTSVATHPGTNGNGAASSLIKSLLANKVTPTATEVSESNVSAAPNNPSCLITQNVNMHQVAQRQHLQKQKELAQQHQQQQQQQQQQQQQAVVVSNIKASTAMTLPTTTISALVNNPIIQSPSVKVGQTTIKAINSNTVIPAAVIEKKNQNQNMACEIITENASWEPVPPSMPVSGITRPQNTNIIIGVSSEDSNSTGNNSIASSIISSAQVNTTDEGEGSEISFEGLLIPKSKSGSSSIIIEDESSKDSINKSSLVVHANQMLADLLDKKSPDPPMNSGIKRKLDDDSEENASKRPAVEIDLTLDYDEEIKVTPSKNAANLYAEMAASILEDEDLEEEPQIQSLIQQHHQQISIPPLQTQMSTQMHQQQQQIQAQIQSQMPHHQLQNQVQTQIQTPVIQKTADAQKQLITMPMPLQRQIIVAPNSPHQMILSQASSGNQPVQTQATATIKTDTGLQTVPLILQKQVGPGGQQIIQPVIQSSQPQTQYVLATNPQGQTYLVAQQPQPTQTVLVTQTPQQQGTPSKTIIILQQQGGPSQAVGAQQQILGTSGTPQKVIMTTPQGQQMIVTQVPRPMQHQIVMNHPTTSSIQTNASQNVVLSQSQSPLHQQHQMQQHMQVQNQFQPQQHIQTQQHNIQAQQHNIQTQQHNIQTQQHNIQTQQHIQTQPHQQMQKQIQILATPQVQNNPQQQQQQQTEKNVLSQLPHIPATIKLHPHQTQNTQTQTIPKALPAKSPVATVQQQQQQQQQLQTPVPVVTQQQQPPIQQHTIQNHSKLPDRRLFIGGNGGNIDIGDGSQQIPVIGSVTSGTQTIITQPQQQQQQQIQSPVVQQSPHQSLTSIPPVVATHQTPAIIAPPPPPPPPPPAKPSKTLADIKSDEELIDSNWMWVCDWRNCPRKKFKSLNDVYRHACIVHCPESLDPSAEIYCQWGPGPGLCDSIPRKRFSLMTHLLDRHCTTEAFKAAVQRRIATGIQPSIHTTPVTIIKNAQAPVSSATNSECRGTASPALSTSSTSSLPPAASAAMHAIKRHTSDFANPKELMDENEGPVTKSIRLTAALILRNLVTYTTTAKKNVRCYEPHLAGVALSNVESSQAISQILYEMNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00454313;
90% Identity
iTF_00454313;
80% Identity
-