Basic Information

Gene Symbol
Arid4b
Assembly
GCA_963924295.1
Location
OZ002741.1:232003881-232019457[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-27 2.6e-23 84.8 0.1 1 88 294 379 294 380 0.95
2 2 3.8 7.3e+04 -3.2 0.0 52 83 598 624 583 630 0.69

Sequence Information

Coding Sequence
ATGCagCAAGTGGACGATCCCCCGTCATTACCAGTTGGAACGGAGGTAAGCGCTAAGTACAAGGGGGCTTTTTGCGAGGCGAAGGTGCGGAAAGTTGTACGAAATATTAAAGTAAAAGTTGCATATAAACAAGGACTAGGATCTGGGATTGTATCAGATGATGCTATTAAAGGTGTTCTACGAGTTGGTGTCGGCGTTGAGGTTAAACATCCGGATAGGCGGGAGTATGTTGAAGCCACGATTACAAAAATTCAAGATTGTTCTCAATATACGGTGGTTTTTGATGATGGCGACATTACAACGTTAAGGAGAACAGCACTTTGCTTGAAGAGTGGAAGACACTTCAATGAAAGTGAAACCCTTGATCAGCTTCCCTTGACTCATCCTGAGCACTTTGGAAATCCTGTCATTGGAGGACGAAGAGGAAGACGCTCACGACACCTTCACGATGATAGTTCGGATGAGGATGAGGAACCAGACTCGAAAGAAGTGattaatgaaaaagaagaacATATAGGAAAAGTAGTTTGCGTTGAATCAACTGAAACAAAGAAAAAGGACAAAGATAAATGGTTTCCGGGGCTTGTGGTTGCTCCTACAGCCCAAGTAACAGTTCGAATACGAGTTAAAGATGAATACTTGGTACGATCTTTTAAAGATGGTCGTTATTATACTGTGCCGAAAAAGGAAGCAATGGAATTTACGCGAGAATTGGCAGCTAAGCAAGATGGTCCTGCTGTACAAGCAGCTCTTGAATACTTGGATAATGACACCCTACCAGCTCATTGGGACAGAGATGCTCTGTTTAGTTTAGCAAATAGTTCTAGCGAATATGAAGGCGAATTCGATTCTGATAGTTCTGATGATGAGCCCCGTGAAGAAAAGGATCATTTTGTAGCACAGCTTTACAAATACATGGACGACAGGGGAACGCCACTCAATAAAGTCCCTTCTATTGCCAATCGGGAAGTGGATTTTTATCGCCTATTTAGAACTGTGCAAAAATTGGGCGGCTATAATCGGGTTACAAATCAAAATCAATGGAAAGCCATTACAATGCGGTTGGGATTTGCTCCAGTAACTGTTAGTGTGACGAATTTAGTTAAACAGGCATACAAGAAATTTCTACAACCATTCGTTGAATTTGATAGGAAATTAGGTTGCTCAATGTCCATGACTCCAAGAAATGCTAATAGAAGCAAAGGAAGAAGTTTGGTCCGTGCTAATTCTGTTGCATCTCCAAAGCCAGAAGTTAAGGAAATAAAACCGGTTTCTTTAATAGAAGAGTCGGAAAACACAAGCGAGTCTAGCATGGATGCAACTAAGTCAAAGAGGAAGACGTCAACAAGTAGCAATAAAGTTAAAGCTTTAGTTGATAAATTCGAAGAAAAAGTGAAAGAAGAAGCTGAAAAGGCAGAatctgttattgttgttgttacttcctctgctgctgttgttgctgcttctgctgctgctgctgttgcttcTTCTAGTACTACTACCACCGCTGCAGCTGCTACAGTCGCTGCTTCAGTATCCACCTCTACTTCTGGTACCGTTGCTGTATCTGTTCCTTCTACTGCCGCTCCTCCTCCTGTTCCTGCTCCTGCACCTGCTGCTGTTGTTGCACCGAAGAATACAAAACTACCACCTAAGGATGATCAATCAGCTGGATCTGGTTCATCGAAGGAGACAATTCCGGTGGTAAGtacaaagaaagaaaaagttaCTAAAAAGCAACCACCAGTTGACGAGAAAAGAGGTACCAGAAAGAGAAAAGAAGGTGATAACACAGAAAAAACTACTGAAGTCGCTGCTCAAAATGAATTCCCTGTTGAAGTTGGAGACAAGTTAAAGGTATACTATCACGAGAAGAAAGTTACGTACGAGGCAAAAGTTATTGAAATCTCGCTTCAACAAGGTACACCTCTATATCTGGTACATTATACTGGCTGGAATACTCGTTATGATGAATGGGTACCAAGAGAACGTATTGCAGAAAATTTAACGAATAGTAAAACCAAACGATCGAAAGGTTCCGCGAATAATCAGAGAAATGCAGCTCACGCCATTAATCATCCAAATGAAATTACGAAATCTGCATCCGGCAGTAAAATTGATGATAAAACTTCTGTTACAACACTAACAACAACCCCGTTGGGTAACAAATCAACAATTGCGGCTACTAAACGAGGACGTGGAAGAAGTGATTCGCAACCTCCTAGATCAACCACACCATCTTCAGTAGCTTCAAATTCAAGTCGTACAAAATCTCCTGCAACTCCAGCTGCTCAACGTCGCACAACTAGAACACAACCAGGCACACCACGCCGAGCGTCGAATAACGTTTCAGATATTTCATTACAAACTGATTCCGATAGTGATTCTGATGAACCAGTTAAAAAGccttcaaaaattataattaacacGAGTTCAATCAGCAATCAATCAAATCAGGCCTCGAATTCCGGAAAAATGAGTTCAACAAAATCAACATCTTCTACAGCAGCTAACAGCCCAAGTGAAACTGAAGAAGATGAAGTTGCAGCAGGTGCCAAGGGTAGAGATTACGATTTGAACCAAATTCGTTCAGAGCTAAAAGGTTTCAAAGAACTGAAATCTCCATCACCGGAAGCAGAGACGTCTACCCAGATGCAACCTGATAAAAAACCAGCGAATATGTTTGATTTTAATGTTGCAGATGACAGTGGGGCTAACAAATCTATCATTACACCTTGTAGTCTGTTAAAATCATCAATCTCTGTAACTGAATCGAAATCATCATCAACTGATCTATCTTCTGAAACTGATTCATTTGCTGATGATGATTCTCAGTCGTCGGATAAAACAACAACTTTAGAAAATATGACTGAGAAATtgcaacaaaaaattaaagctgAAAAATTAGCCCAAGCAAAGAGTCTGGAACGAATAACTGCAGGAAAGTCCCCAGAAAAAGTTACTCCTATAAAATCTGCTGGAATCGAGAAAATTATTAACGACACTTTAGCTGAGAAGATACAAGAAAGTATGAAGGTGAAACCATTTTTAATTGAAAAGGGCATTTATAAAGGGACCGACAAAGAGGAAAAGCCTAAAGCAAGCCCCGATTCTAAATCTCAAGTAATAAAATCCATTACGCCTGAAAGAAAGCTAATACAAACTGTTACAACACCAGAAAAGAAACCACTTCCCGTAATAGAAGTGAAATCTATTCCATTACGAGCGGAACGAAAAATGCCTAATATCGAAAAACCTCAGCTCTATGCAAAATTAGCCCATAAAGAATTGTCGCCGCAACAGCCGGAAGTTGCACCACAAAAGCCGATTACAATTTTGCAAGAGCCAGTTATAAAAGATTCTCCCAAGTCCCATGTACAAACAAGAAATAATCCTACCCCTGACATATATGAGTTCAAAGAGCCTGAACCATTTGAGTTTGAAGTGCGTAAGCCACAGCCTGCGGTATTTTCTCTGTcagaacctgaaaagaaaaagaaaatttcaccaAAAGCTTCGGAGTCTATGCTAGAACTAAAACCAGTACCAGTACCTACAGCAGCGGCTGCTAAAAAGAACAAGAGATCCCCAACTAAAGATCCAGACAAATCAAAGCAGttaaaattggaagaaaaatcTACGGCTGTAGAGAGTGGATCAGGAACTAGTGCAATACTTTTGTCTCCCATAAAAACTGAGACAACATTTGATGTCTTACGGAAATCTCCCAGTTTTAACCTTAACATAAATGCATTAAACGAAGAATTAGCTACTACAGTTCAAGAGACCACGAAAGTTCTCACTGATGTATCAGAGAATCCCATTCCGGTTATCTTACCATCACAGCAAAAAGCAATCTCTTTCATAAGTCCATTCATTGAGACAAAGTCTGATATTTCGAACATTTTCGATCTTAAGACAGACATTGAAAATATCAAAGAGGACAACAACGATGAAAAATCGTCAGGATGTAAAACTGAACtagaaactgtaaagaaaattttattgtctGATGCTAGTTTTGATTTAGAGCCTCCGAAGATAGACAAACCTTCATCCATTGCTGATAAAGTTTTAAAGGCGCTCAATCAGCAAAAGCAGGACGAAGAAAAACTAAAAGAAGAATCAGATTTCGTGGTGGCTGCTCCCAGTTCACCCTTACCATCTCCTTCATTAGCCAGTACTTCACTTAATAAGTCTCCTTTCATTGAAATACAAtcaataacaacaaataattcgttTCCGCCTCCAGAGCCGCCTAAGGTACTTTCGACGTTTTCCATAATTACAGAACCACCCAAAATTGAGTTGCCAGCAGTTATAAAAAAAGATCTTGAAATTCCAGTGAAGAAGCCAATTCTAAGCAGTCCTGAGCACAAACTTGATATTTTCGAATCGATTGCTCCTAAAAATAACGATTTGAGTGAAACTATACAAAAGCTCGAAAGTGCTATTCAAAAAACTTCAAACGTTGATCACTTCGATGAAGATTCTTCtgatagcacagattcggaacgACGTTTGGTCATAGAAGATGACGATTCTCAAAGTTCTGATAATAATCAATCTGAGATAATTGAGCTGCCTGTGAGtaatctatttaaaaaaattgaaaacatggAAGAGAAAAGCAGTCTTATCCAGGATATTGTTACTAAAGATGATTCACCTGTTTTTACGACGAAATATCCATCAATTTTCGGATTACAAACATCTGTCTATTCGGATGTAGCTTTATTATCAGACTCTGGTATTAAGCCTATCGTTGAACTGTTGCCATCGCTTAAGTCTGATttcgaaataaaacaaaagccTGATCTAATTTTGCCTGAGAGCAGTATTCTATCTTGTTCCGGAATAAAAAAAGATGAATCTTTATCGTGCCAGGAAAATTTGAATATGCACAATGAATCAATAAATTTATTGCTATGTGAAGAAACCATCCCGGGCAGTCCGACACCCACAACTAAAGAACTTTCAGATATCAAGATGAACATGCATCCAATAGAGTCCGATATTAAACCCATTCCTATGGATCTAGAATGTGGGCCAATTATCTCTAGTGTGGTTGATATTAGTTccataaaaatacataaaatcgatAATCAAACTCCAAGCAGTTCACCTCATGATTCAGCCAGTCAGTATGATAGCAGTGAAGATCTAAAAAAACAGTTGGAACAAGATATTGACGTATCACCTAAGAAAAAACGGCGTAGTAGGAAGCATTCGGAGTGTGAAACATTGGTGAAGAGGAGACGAACTGCGTCTGGAAAGAAAAATAACGGTTCTGATAGTGATGACAATTCTGATGCAAATGTTTCACAACGATCGTCATCTTCCAGGTCTTCTAGGCCATGCCAATATAACTTCCTGGTGCAGTTGgatcCATCACTAAACCCGAATCAACGAATATcagttttaaaaaagaaaattcaggaACTAAGAAAAACGTACAATATGATCAAAGCCGAGATAGCAAGCATCGATCGTCGACGGAAGAAATTACGACGCCGCGAACGTGAAAAAAAGAATCAACAAAAGTTGAGCAGTTAA
Protein Sequence
MQQVDDPPSLPVGTEVSAKYKGAFCEAKVRKVVRNIKVKVAYKQGLGSGIVSDDAIKGVLRVGVGVEVKHPDRREYVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVIGGRRGRRSRHLHDDSSDEDEEPDSKEVINEKEEHIGKVVCVESTETKKKDKDKWFPGLVVAPTAQVTVRIRVKDEYLVRSFKDGRYYTVPKKEAMEFTRELAAKQDGPAVQAALEYLDNDTLPAHWDRDALFSLANSSSEYEGEFDSDSSDDEPREEKDHFVAQLYKYMDDRGTPLNKVPSIANREVDFYRLFRTVQKLGGYNRVTNQNQWKAITMRLGFAPVTVSVTNLVKQAYKKFLQPFVEFDRKLGCSMSMTPRNANRSKGRSLVRANSVASPKPEVKEIKPVSLIEESENTSESSMDATKSKRKTSTSSNKVKALVDKFEEKVKEEAEKAESVIVVVTSSAAVVAASAAAAVASSSTTTTAAAATVAASVSTSTSGTVAVSVPSTAAPPPVPAPAPAAVVAPKNTKLPPKDDQSAGSGSSKETIPVVSTKKEKVTKKQPPVDEKRGTRKRKEGDNTEKTTEVAAQNEFPVEVGDKLKVYYHEKKVTYEAKVIEISLQQGTPLYLVHYTGWNTRYDEWVPRERIAENLTNSKTKRSKGSANNQRNAAHAINHPNEITKSASGSKIDDKTSVTTLTTTPLGNKSTIAATKRGRGRSDSQPPRSTTPSSVASNSSRTKSPATPAAQRRTTRTQPGTPRRASNNVSDISLQTDSDSDSDEPVKKPSKIIINTSSISNQSNQASNSGKMSSTKSTSSTAANSPSETEEDEVAAGAKGRDYDLNQIRSELKGFKELKSPSPEAETSTQMQPDKKPANMFDFNVADDSGANKSIITPCSLLKSSISVTESKSSSTDLSSETDSFADDDSQSSDKTTTLENMTEKLQQKIKAEKLAQAKSLERITAGKSPEKVTPIKSAGIEKIINDTLAEKIQESMKVKPFLIEKGIYKGTDKEEKPKASPDSKSQVIKSITPERKLIQTVTTPEKKPLPVIEVKSIPLRAERKMPNIEKPQLYAKLAHKELSPQQPEVAPQKPITILQEPVIKDSPKSHVQTRNNPTPDIYEFKEPEPFEFEVRKPQPAVFSLSEPEKKKKISPKASESMLELKPVPVPTAAAAKKNKRSPTKDPDKSKQLKLEEKSTAVESGSGTSAILLSPIKTETTFDVLRKSPSFNLNINALNEELATTVQETTKVLTDVSENPIPVILPSQQKAISFISPFIETKSDISNIFDLKTDIENIKEDNNDEKSSGCKTELETVKKILLSDASFDLEPPKIDKPSSIADKVLKALNQQKQDEEKLKEESDFVVAAPSSPLPSPSLASTSLNKSPFIEIQSITTNNSFPPPEPPKVLSTFSIITEPPKIELPAVIKKDLEIPVKKPILSSPEHKLDIFESIAPKNNDLSETIQKLESAIQKTSNVDHFDEDSSDSTDSERRLVIEDDDSQSSDNNQSEIIELPVSNLFKKIENMEEKSSLIQDIVTKDDSPVFTTKYPSIFGLQTSVYSDVALLSDSGIKPIVELLPSLKSDFEIKQKPDLILPESSILSCSGIKKDESLSCQENLNMHNESINLLLCEETIPGSPTPTTKELSDIKMNMHPIESDIKPIPMDLECGPIISSVVDISSIKIHKIDNQTPSSSPHDSASQYDSSEDLKKQLEQDIDVSPKKKRRSRKHSECETLVKRRRTASGKKNNGSDSDDNSDANVSQRSSSSRSSRPCQYNFLVQLDPSLNPNQRISVLKKKIQELRKTYNMIKAEIASIDRRRKKLRRREREKKNQQKLSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00453013;
90% Identity
iTF_00453013;
80% Identity
-