Basic Information

Gene Symbol
Arid4b
Assembly
GCA_963930735.1
Location
OZ005741.1:270889736-270906178[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-27 2.5e-23 84.9 0.1 1 88 154 239 154 240 0.95
2 2 5.2 6.8e+04 -3.0 0.0 52 83 459 485 444 491 0.69

Sequence Information

Coding Sequence
ATGTATTGCAGCTCAAGACACCTTCACGATGATAGTTCGGATGAGGATGATGAACCAGACTCGAAAGAAGTGATTaatgaaaaagaagagcatataGGAAAAGTAGTTTGCGTTGAATCAACTGAAACAAAGAAAAAGGACAAAGATAAATGGTTTCCGGGGCTTGTGGTTGCTCCTACAGCCCAAGTAACAGTTAGAATACGAGTTAAAGATGAATACTTGGTACGATCTTTTAAAGATGGTCGTTATTATACTGTGCCGAAAAAGGAAGCTATGGAATTTACGCGAGAATTGGCAGCTAAACAAGATGGACCTGCAGTACAAGCAGCTCTTGAATACTTGGATAATGACACCCTACCAGCTCATTGGGACAGAGATGCTTTGTTTAGTTTAGCAAATAGCTCTAGCGAATATGAAGGCGAATTCGATTCTGATAGTTCTGATGATGAGCCTCGTGAAGAAAAGGATCATTTTGTAGCACAGCTTTACAAATACATGGACGACAGGGGAACGCCACTCAATAAAGTCCCTTCTATTGCCAATCGGGAAGTGGATTTTTATCGGCTATTTAGAACTGTGCAAAAATTGGGCGGCTATAATCGCGTTACAAATCAAAATCAATGGAAAGCCATTACAATGCGGTTAGGATTTGCTCCAGTAACTGTTAGTGTGACGAATTTAGTTAAACAGGCATACAAAAAATTTCTACAaccatttgttgaatttgatagGAAATTAGGTTGCTCAATGTCCATGACTCCAAGAAATGCTAATAGAAGCAAAGGAAGAAGTTTAGTCCGTGCTAATTCTGTTGCGTCTCCAAAGCCAGAAGTTAAGGAAATAAAACCGGTTTCTTTAATAGAAGAGTCGGAAAACACAAGCGAGTCTAGCATGGATGCTACTAAATCAAAGAGGAAGACATCAACAAGTAGCAACAAAGTTAAAGCTTTAGTTGATAAATACGAAGAAAAAGTCAAAGAAGAAGCTGAAAAGGCAGAaactgttattgttgttgttacttcctctgctgctgctgttgctgctactgctgcttcTTCTTCTAGTGCTACTACCACCGCTGCAGCTGCTACAGTTGCTGCTACAGTTTCCACCTCTATTTCTGCTACCGTGGCTGTATCTGCACCTGCTACTTCCGCTCCTCCTCCTGCTCCCGCTCCTGCTCCTGCTCCTGCTCCTGCTGCTGTTGTTGCACCGAAGAATACAAAACTACCACCTAAGGATGATCAATCAGCTGGATCTGGTTCATCGAAGGAGACAATTCCGGTGGTAAGtacaaagaaagaaaaagttactAAAAAGCAGCCACCGGTTGACGAGAAAAGAGGTACCAGAAAGAGAAAAGAAGGAGATAACACAGAGAAAACTACTGAAGTCGCTGCTCAAAATGAATTCCCTGTTGAAGTTGGAGACAAGTTAAAGGTATACTATCATGAGAAGAAAGTTACATACGAGGCAAAAGTTATTGAAATCTCGCTTCAACAAGGTACACCTCTATATCTGGTACATTATACTGGCTGGAATACTCGTTATGATGAATGGGTACCAAGAGAACGTATTGCAGAAAATTTAACGAATAGTAAAACCAAACGATCGAAAGGTTCTGCGAATAATCAGAGAAATGCAGCTCACGCCATTAATCATccaaatgaaattacaaaatctGCATCTGGCAGTAAAATTGATGATAAAACGTCTGTTACAACACTAACAACAACCCCGTTGGGTAGCAAATCAACAATTGCTGCTACTAAACGAGGACGTGGAAGAAGTGATTCGCAACCTCCAAGATCAACCACACCATCTTCAGTAGCTTCAAATTCAAGTCGTACAAAATCTCCTGCAACTCCAGCTGCTCAACGTCGCACAACTAGAACACAACCAGGCACACCACGCCGAACGTCGAATAACGTTTCAGATATTTCATTACAAACTGATTCCGATAGTGATTCTGATGAACCAGTTAAAAAGccttcaaaaattataattaacacGAGTTCAATTAGCAATCAATCAAATCAGGCCTCGAATTCCGGAAAAGTGAGTTCAACAAAATCAACATCTTCTACTGCAGCTAACAGCCCAAGTGAAACTGAAGAAGATGAAGTTTCAGCAGGTGCCAAGGGTAGAGATTACGATTTGAACCAAATTCGTTCAGAGCTAAAAGGTTTCAAAGAACTGAAATCTCCATCACCGGAAGCAGAGACGTCTACCCAGATGCAACCTGATAAAAAACCAGCGAATATGTTTGACTTTAATGTTGCAGATGACAGTGGGGTTAACAAATCTATTATTACACCTTGTAGTCTGTTAAAATCATCAATCTCTGCAACTGAATCGAAATCTTCATCAACTGATCTATCCTCTGAAACTGATTCTTTTGCTGATGATGATTCCCAGTCGTCGGATAAAACAACAACTTTAGAAAATATGACTGAGAAActgcaacaaaaaattaaagctgaaaAATTAGCCCAAGCAAAGAGCCTGGAACGAATATCTGTTGGAAAGTCCCCAGAAAAAGTTACTCCTATAAAATCTGCTGGAATCGAAAAAATTATTAACGACACTTTAGCTGAGAAGATACAAGAAAGTATGAAGGTGAAACCATTTTTAATTGAAAAGGGCATTTATAAAGGAACCGACAAAGAGGAAAAACCTAAAGCAAGCCCCGATTCTAAATCTCAAGTAATAAAATCCATTACGCCTGAAAGAAAACTAATACAAACTGTTACAACACCAGAAAAGAAACCACTTCCCGTAATAGAAGTGAAATCGATTCCATTACGAGCGGATCGAAAAATGCCTAACATCGAAAAACCTCAGCTCTATGCAAAATTAGCCCATAAAGAATTGCCGCCACAACAGCCGGAAGTCGCACAACAGAAGCCGATTACAATTTTACCAGAGCCAGTTATAAAAGATTCTCCCAAGTCTCATGTACAAACAAGAAATAATCCTACCCCCGACATATATGAATTCAAAGAGCCTGAACCGTTTGAGTTTGAAGTGCGTAAGCCACAGCCTGCGGTATTTTCTCTGTcggaacctgaaaagaaaaagaaaatttcaccaaAAGCTGAGTCTATGCTAGAACTAaaaccagtaccagtacctacAGCTGCGGCTGCTAAAAAGAACAAGAGATCCCCAACTAAAGATCCAGAAAAATCAAAGCAgttaaaattggaagaaaaatttACGGCTGTAGAGAGTGGATCAGGAACTAGTGCAATACTTTTGTCTCCCATAAAAACAGAGACAACATTTGATGTCTTACGGAAATCTCCCAGTTTTAACCTTAACATAAATGCATTAAACGAAGAATTAGCTACTACAGTTCAAGAGACCACGAAAGTTCTCACTGATGTATCAGAGAATCCCATTCCGGTTATCTTACCATCACAGCAAAAAGCAATCTCTTTCATAAGTCCATTCATTGAGACAAAATCTGATATTTCAAGCATTTTCGATCTCAAGACAGACATTGAAAATATCAAAGAGGACATCAACGATGAAAAATCGTCAGGAAGTAAAACGGAACTAGAAActgtaaagaaaattttattgtctGATGCTAGTTTTGATTTAGAGCCTCCGAAGATAGACAAACCTTCATCCATTGCTGATAAAGTTTTAAAGGCGCTCAATCAGCAAAAGCAggacgaagaaaaactaaaagaagAATCAGATTTGGTGGTGGCTGCTCCCAGTTCACCCTTACCTTCTCCTTCATTAGCTAGTACTTCACTTAATAAGTCTCCTTTCATTGAAATACAAACAATAGCAACAAGTACTTCGTTTCCGCCTCCAGAGCCGCCTAAGGTGCTTTCGACGTTTTCCATAATAACAGAACCACCCAAAATTGAGTTACCAGCAGTTATAAAAAAAGATCTTGAAATTCCAGTGAAGAAGCCAATTCTAAGCAGTCCTGAACACAAACTTGATATTTTCGAATCGATTGCTCCTAAAAATAACGATTTGAGTGAAACCATACAAAAGCTCGAAAGTGCTATTCAAAAAACTTCAAACGTTGATCACTTCGATGAAGATTCTTCTGATAGCACAGATTCGGAACGACGTTTGGTCATAGAAGACGACGATTCTCAAAGTTCTGATAATAATCAATCTGAGATAATTGAGCTGCCTGTGAGtaatctatttaaaaaaactGAAAGCATGGAAGAAAATAGCATTCTTATCCAGGATATTGTTACTAAAGATGATTCACCTGTTTTTACGACGAAATATCCATCAATTTTCGGATTACAAACATCTGTCTATTCGGATGTAGCTTTATTATCAGATTCTGGTATTAAGCCTATCGTTGAACTGTTGCCATCGCTTAAGACTGATTTCGAAGTAAAAGAAAAGCCTGACCTAATTTTGCCTGAGAGTAGTATTCTATCTTGTTCCGGAATAAAAAAAGATGAATCTTTATCGTGCCAGGAAAATTTGAATATGCACAATGAATCAATAAATTTATTGCTATGTGAAGAAACCATCCCGGGCAGTCCGACACCCACAACTAAAGAGCTTTCAGATATCAAGATGAACATGCATCCAATAGAGTCCGATATTAAACCCATTCCTATGGATCTAGAATGTGGGCCAATTACCTCTAGCGTGGTTGATATTAGTTccataaaaatacataaaatcgaTAATCAAACTCCAAGCAGTTCACCTCATGATTCAGCCAGTCAGTATGATAGCAGTGAAGATCTAAAAAAACAGTTGGAACAAGATATTGACGTATCACCTAAGAAAAAACGACGTAGTAGGAAGCATTCGGAGTGTGAAACATTGGTGAAGAGGAGACGAACTGCGTCTGCAAAGAAAAATAACGGTTCTGATAGTGATGACAATTCTGATGCAAATGTATCACAACGATCGTCATCTTCCAGGTCTTCTAGGCCATGCCAATATAATTTTCTGGTGCAGTTGGatcCATCACTAAACCCGAATCAACGAATATcagttttaaaaaagaaaattcaggaACTAAGAAAAACGTACAATATGATCAAAGCCGAGATAGCAAGCATCGATCGTCGACGCAAGAAATTACGACGCCGCGAGCGTGAAAAAAAGAATCAACAAAAGTTGAGCAGTTAA
Protein Sequence
MYCSSRHLHDDSSDEDDEPDSKEVINEKEEHIGKVVCVESTETKKKDKDKWFPGLVVAPTAQVTVRIRVKDEYLVRSFKDGRYYTVPKKEAMEFTRELAAKQDGPAVQAALEYLDNDTLPAHWDRDALFSLANSSSEYEGEFDSDSSDDEPREEKDHFVAQLYKYMDDRGTPLNKVPSIANREVDFYRLFRTVQKLGGYNRVTNQNQWKAITMRLGFAPVTVSVTNLVKQAYKKFLQPFVEFDRKLGCSMSMTPRNANRSKGRSLVRANSVASPKPEVKEIKPVSLIEESENTSESSMDATKSKRKTSTSSNKVKALVDKYEEKVKEEAEKAETVIVVVTSSAAAVAATAASSSSATTTAAAATVAATVSTSISATVAVSAPATSAPPPAPAPAPAPAPAAVVAPKNTKLPPKDDQSAGSGSSKETIPVVSTKKEKVTKKQPPVDEKRGTRKRKEGDNTEKTTEVAAQNEFPVEVGDKLKVYYHEKKVTYEAKVIEISLQQGTPLYLVHYTGWNTRYDEWVPRERIAENLTNSKTKRSKGSANNQRNAAHAINHPNEITKSASGSKIDDKTSVTTLTTTPLGSKSTIAATKRGRGRSDSQPPRSTTPSSVASNSSRTKSPATPAAQRRTTRTQPGTPRRTSNNVSDISLQTDSDSDSDEPVKKPSKIIINTSSISNQSNQASNSGKVSSTKSTSSTAANSPSETEEDEVSAGAKGRDYDLNQIRSELKGFKELKSPSPEAETSTQMQPDKKPANMFDFNVADDSGVNKSIITPCSLLKSSISATESKSSSTDLSSETDSFADDDSQSSDKTTTLENMTEKLQQKIKAEKLAQAKSLERISVGKSPEKVTPIKSAGIEKIINDTLAEKIQESMKVKPFLIEKGIYKGTDKEEKPKASPDSKSQVIKSITPERKLIQTVTTPEKKPLPVIEVKSIPLRADRKMPNIEKPQLYAKLAHKELPPQQPEVAQQKPITILPEPVIKDSPKSHVQTRNNPTPDIYEFKEPEPFEFEVRKPQPAVFSLSEPEKKKKISPKAESMLELKPVPVPTAAAAKKNKRSPTKDPEKSKQLKLEEKFTAVESGSGTSAILLSPIKTETTFDVLRKSPSFNLNINALNEELATTVQETTKVLTDVSENPIPVILPSQQKAISFISPFIETKSDISSIFDLKTDIENIKEDINDEKSSGSKTELETVKKILLSDASFDLEPPKIDKPSSIADKVLKALNQQKQDEEKLKEESDLVVAAPSSPLPSPSLASTSLNKSPFIEIQTIATSTSFPPPEPPKVLSTFSIITEPPKIELPAVIKKDLEIPVKKPILSSPEHKLDIFESIAPKNNDLSETIQKLESAIQKTSNVDHFDEDSSDSTDSERRLVIEDDDSQSSDNNQSEIIELPVSNLFKKTESMEENSILIQDIVTKDDSPVFTTKYPSIFGLQTSVYSDVALLSDSGIKPIVELLPSLKTDFEVKEKPDLILPESSILSCSGIKKDESLSCQENLNMHNESINLLLCEETIPGSPTPTTKELSDIKMNMHPIESDIKPIPMDLECGPITSSVVDISSIKIHKIDNQTPSSSPHDSASQYDSSEDLKKQLEQDIDVSPKKKRRSRKHSECETLVKRRRTASAKKNNGSDSDDNSDANVSQRSSSSRSSRPCQYNFLVQLDPSLNPNQRISVLKKKIQELRKTYNMIKAEIASIDRRRKKLRRREREKKNQQKLSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00454312;
90% Identity
iTF_00454312;
80% Identity
-