Basic Information

Insect: Dioctria linearis
Gene Symbol: -
Assembly: GCA_963930735.1
Location: OZ005740.1:25178531-25194712[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00022 0.1 15.7 3.4 1 23 200 222 200 222 0.98

2 11 0.0014 0.65 13.2 9.5 1 23 228 250 228 250 0.96

3 11 8.3e-05 0.039 17.0 6.4 1 23 256 278 256 278 0.98

4 11 0.00086 0.4 13.8 1.6 1 23 284 306 284 306 0.95

5 11 2.3e-05 0.011 18.7 0.5 1 23 312 334 312 334 0.97

6 11 7.1e-06 0.0033 20.4 0.2 1 23 340 362 340 362 0.98

7 11 8.6e-05 0.041 16.9 1.8 1 23 367 389 367 389 0.97

8 11 5.8e-05 0.027 17.5 0.1 1 23 395 418 395 418 0.97

9 11 0.00031 0.15 15.2 0.1 1 23 506 528 506 528 0.97

10 11 0.033 16 8.8 2.7 1 23 622 644 622 644 0.95

11 11 0.006 2.8 11.1 5.2 5 23 657 675 649 675 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00022	0.1	15.7	3.4	1	23	200	222	200	222	0.98
2	11	0.0014	0.65	13.2	9.5	1	23	228	250	228	250	0.96
3	11	8.3e-05	0.039	17.0	6.4	1	23	256	278	256	278	0.98
4	11	0.00086	0.4	13.8	1.6	1	23	284	306	284	306	0.95
5	11	2.3e-05	0.011	18.7	0.5	1	23	312	334	312	334	0.97
6	11	7.1e-06	0.0033	20.4	0.2	1	23	340	362	340	362	0.98
7	11	8.6e-05	0.041	16.9	1.8	1	23	367	389	367	389	0.97
8	11	5.8e-05	0.027	17.5	0.1	1	23	395	418	395	418	0.97
9	11	0.00031	0.15	15.2	0.1	1	23	506	528	506	528	0.97
10	11	0.033	16	8.8	2.7	1	23	622	644	622	644	0.95
11	11	0.006	2.8	11.1	5.2	5	23	657	675	649	675	0.92

Sequence Information

Coding Sequence: ATGCCCTACTTGCAGTTAACGGATGGTGGTATAGCCGTTCAGAAGGATGTTAAAGGGACAATAACTCATACTAACAAAGGTGGAGTGGTTCGTCGTATGTTTGTCGTTAATGAACCATTTCCACCCGCAACAACACAACGtgttaTTACCACAGGAGGAACTACGGCTGTTACCCATAAAAAGCAGGACGTGCTGAGTATAGGATGTGATAAGAACTATCAATCTCATTCTATAGCAAATGGAATACTTGATACGAAAACCATTTTGACAACATCCGGTGGGAAGACGCATTTTAGTCCGATCGGTCCACTACATCTCACAGCCGAAGAATGTAATGAAATCTTAATGAAGCGTGCTATTGCTGCATCAGCCCAAAATCATACAACAATTACAACAGCGGATGGCCAACATACAGATGATATTCTGCCAGGTATATCTGTGCAAGTTCAGAAAGTTATTCAAGGACTGGAAGATACAGAAGATTCACAAGCTACATCCTCAACACATTGTAAACTAGAGCCAGTGCTTGAGATATCACCAAAATCTGAAATACCTGATGATCAACCCCAAAACACTACAGTGGTTAAAGAAAGACCTTATTCTTGTGATGAATGTGGAAAATCCTTTTTATTGAAACATCATTTAACAACTCATGCTAGAGTTCATActggtGAAAGACCACATGTTTGTGTACATTGTGGTAAAAGTTTCGCCCATAAACATTGCTTGAACACCCATTTGCTGTTGCATTCTACAGATCGACCTTATCAATGCAGTGAATGCAAGAAGAGCTTTACATTAAAACATCATTTATTAACTCATTCACGTGTTCATAGTCGAGAAAGACCGTTCATTTGTCAGGAGTGTGGCAGAGCTTTCCCCTTAAAAAGACACCTAGTAACACATAGTAAATTTCATGCTGGCGAACGTCCTTATGTATGCGAAGAATGTGGTGAAAGTTTTGCCCAGGAAAATCATCTTATAATGCATTCAAGATTCCATGGTTCTATAAATCCGTTCGTTTGTCAAGATTGTGGAGCAACATTTCCAAGGAAATTTCAATTGGTCAATCATGGACGAATTCATGGGAAAGTTCCGCATTCGTGTACTGTTTGTGGAAAAGAATTTCTCCAGAAGAGGACACTCGTATCACATATGAGAATTCATACTGGTGATCAGCCATATCCATGTACGGGTTGTGGTGATGGTTTCTCAACGAAAGCTGAATTGAATCAACATTTTCGTATGATTCATGGTGGTGTTAATCCGAATTCTGCTAATACTACTATTGTTGCTGCAAATACGATAGTTTCAACCacacaacaacagcaacaagcAACACAAATTCATATTCAACAGCAAccgcaacagcagcagcagcaacagcaacaacaacagcagcagcaacaacaagcacaacagcagcaacaacaaataGTCACAGTTGTCAGTAATCCAAATAATGCCTTAGTTACTGCTAATGCGGCTGCAGAGAATACCTCACCTAGGCCGCAATATGCATGTCGGGAATGTGGAAGTGCCTTCAACAGTAGAGAAGCTTTGGCACTACATTTACGATTGCACACTGGCGATAAAAGTCTTATGACAGATTTATGTGCTCTAACGGCAGCATTACCTGGACACTTTTTGAATACAACTAACTTAAATCAAGGTATCGCTTCAGTTGTTGCAGCTGCAAATCAATCTGTGGTTACACAAAATGCTGTTCCCGTACAAATAATTTCATCGACCGGACAAGTCGTTAGTCAAGCCATGGTACAAAGTCCTCCACAACAACAAAGTGTTGTAACAACAGTTCAATCATTATCACATCAATCTCATCATGTACCAAAACCGAAAACACATTTTTGTGTTAGTTGTGGTAAAGGTTTCGCCGCAAAACATGGTTTACTTCAACATAATCGACGTCATCCAAACGGTGGCTGTACCCTACGAACACATGTTTGTGAATGTGGTAAAGCTTTCTTCCAAAAGAATCATCTTATGCTTCATCAGAGGCAACATTTAGAAACAAAACCGAATGTTTCTagtcaacaacagcaacaacaacaacagGAAGCATTagcacaacagcaacaacaacaacagcagcaacagcagcaacaacaacagcagcagcagcaacaacagcaacagcaacaacaacaaaatcaacagcttgctcagcaacagcagcagcaacagcaacaacaacagcaacaaaatcaAGCCCAACAACAACATACCATATCTCGAGAGGTTCTAATAGGTAATCAACCAGTGCATGTACAGGTCCTACAAGGTTCCAATACTGCCCAAGTTATTAAGTACGAAATCAATATACCACAAGAAGGGCAAAGTATAGAGTGA
Protein Sequence: MPYLQLTDGGIAVQKDVKGTITHTNKGGVVRRMFVVNEPFPPATTQRVITTGGTTAVTHKKQDVLSIGCDKNYQSHSIANGILDTKTILTTSGGKTHFSPIGPLHLTAEECNEILMKRAIAASAQNHTTITTADGQHTDDILPGISVQVQKVIQGLEDTEDSQATSSTHCKLEPVLEISPKSEIPDDQPQNTTVVKERPYSCDECGKSFLLKHHLTTHARVHTGERPHVCVHCGKSFAHKHCLNTHLLLHSTDRPYQCSECKKSFTLKHHLLTHSRVHSRERPFICQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSINPFVCQDCGATFPRKFQLVNHGRIHGKVPHSCTVCGKEFLQKRTLVSHMRIHTGDQPYPCTGCGDGFSTKAELNQHFRMIHGGVNPNSANTTIVAANTIVSTTQQQQQATQIHIQQQPQQQQQQQQQQQQQQQQAQQQQQQIVTVVSNPNNALVTANAAAENTSPRPQYACRECGSAFNSREALALHLRLHTGDKSLMTDLCALTAALPGHFLNTTNLNQGIASVVAAANQSVVTQNAVPVQIISSTGQVVSQAMVQSPPQQQSVVTTVQSLSHQSHHVPKPKTHFCVSCGKGFAAKHGLLQHNRRHPNGGCTLRTHVCECGKAFFQKNHLMLHQRQHLETKPNVSSQQQQQQQQEALAQQQQQQQQQQQQQQQQQQQQQQQQQQQNQQLAQQQQQQQQQQQQQNQAQQQHTISREVLIGNQPVHVQVLQGSNTAQVIKYEINIPQEGQSIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01049868;
90% Identity: iTF_01049868;
80% Identity: -