Dlin108098.1
Basic Information
- Insect
- Dioctria linearis
- Gene Symbol
- Hr39
- Assembly
- GCA_963930735.1
- Location
- OZ005744.1:208292102-208294594[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.56 3.3e+04 -3.5 0.4 146 151 44 49 15 122 0.55 2 5 0.18 1.1e+04 -1.9 1.3 122 143 239 260 132 301 0.54 3 5 4.9e-12 2.9e-07 32.9 0.0 1 65 423 487 423 504 0.80 4 5 0.0027 1.6e+02 4.2 0.0 77 156 475 545 458 552 0.71 5 5 8.4e-70 4.9e-65 223.2 0.2 199 379 546 721 532 724 0.95
Sequence Information
- Coding Sequence
- ATGTCAACTCCCCTTGGGGATATGTCCCCGATTTTAGCTAGTCCGAATAGCTCAATGCTTAGTTCGAATATTATTGGCAATGTgtcgacaacgacgacgacgtcGACGACGATGACTGCACGAAATAATATCTCAGTCACAAGTATAAAATGTGAAGAAAATGTTCGACCACCGTCAGCACCAGCAGCAATTACAACCACCACAAACAACTCAACGTTAAATGGAATTCCTAacagtaataatttttttaacggTGGAATTCGAATTTCCGTCCCAAAAGTCGAAGATTCTGATGAATCGGAATCGGAATTGTCGACAATAGAAAACTCAAAAGTGAACCGTAGATCGAATATGACAAATAAGAATGGACCACGACCCATGTCTTGGGAGGGTGAACTTTCTGAAGCCGAAGATCTTATGGACACTGAGAATTCAGTCAGCAATGATAAGCAGTTTGAGGATTCACAGATGTCTACTAAGGATGATTCGAGGCCGTGTGCAAATATAAAGCCTGAATTTGATCAGATTTCCGTAGAAACAGGTGCAGGCGTTATATTCACGTCGGCATCATCAAAAAAATTTCAGAGTGATATAGTTAATCTTAAGTATGAACCTGGTCTCACAGATCCATCAGTTCCAAGTGGCCTAAATTCACCATTGCTAGCTAGATCTAAAACAAATCTACTACCGGCCAATCCAAGCCCGGATTCAGCTATTCATTCCGTTTATACGCACAGTTCGCCTAGCCAATCGCCACTTACGTCTCGACATGCACCGTATACACCATCGCTGAGTCGCAACAATAGTGATGCGTCACACAGTAGTTGTTATTCGTATAGTTCAGAATTTAGTCCTACACATTCTCCGATCCAAGGTCGTCACAACATCTACGGAAACTTTAATGGCTCCTTGCATCATTCAGTCTTATATCGACCAGTTTTAGATGGCGAAGGTGGTCAATCATTACCTCCAACACCACGTAGACAGGATGAAGTTATCATTGAAACAGATACGATTCCATCTGCCGGTATATCTAGGCAACAGCTCATCAACAGTCCATGTCCGATTTGTGGAGATAAAATCTCTGGATTTCATTATGGAATTTTTTCATGTGAATCTTGTAAGGGTTTCTTTAAACGGACGGTGCAAAATCGAAAAAATTACGTTTGTGTTCGTGGCGGTCCATGCCCTGTTACAATATCAACACGGAAAAAATGTCCTGCATGCCGATTTGACAAATGCCTGCAGAAGGGTATGAAACTTGAGGCCATTCGAGAGGATCGAACTCGAGGTGGTAGATCTACCTATCAATGCTCGTACACGTTGCCGAATTCAATGTTGAGTCCATTAATGAGCCCTGATGCAAGTTGTTCGCAAACGAATCAACGGCTTGGTATCAACGGATGTATGGTAAAATCTGAACAGCCTGACACCAGCAATGGAAATAGTAATAGCAGTATAGGAGGAAACAATCATCGGACTAGCATCCCGCCACTTTTACAGGAAATCATGGATGTTGAGCATCTGTGGCAGTACAATGAGGGTGAATTGTCGCGACTCAATCAACCAACATCCGGTTCAACAATGGATCCTGGAAACTTATCAGCTAATCCGCTTTTAGCTAGTACTGGCCTTTCTTCGAATGGAGAGAATACAAATCCGGATTTGATAGCAAATCTTTGTACAGTTGCCGATCATCGACTGTACAAAATTGTTAAATGGTGCAAGAGTCTGCCACTGTTCAAGCATATTTCGATCGACGATCAAATATGTTTGCTCATTAATTCTTGGTGTGAATTACTTCTATTTTCTTGTTGCTTCCGATCGATAGTGACACCCGGAGAAATAAAGATTTCCCAAGGGAAATCAATCACACTTGAACAGGCTAAATCTAGTGGTCTCCAGGCGTGCATTGAAAGAATGCTTAACCTGACAGATCACTTAAGGCGATTGCGTGTTGATCGATATGAGTACGTTGCCATGAAAGTTATAGTTCTGCTACAATCCGatACATCGGAGTTGCGAGAACCTGTGAAAGTTCGTGAGAGCCAAGAGAAAGCACTGCAAGCCTTACAAGCCTACACTTTAGCACATTATCCAGATTCACCAGCAAAATTCGGTGAATTACTCTTAAGAATTCCAGAATTACAAAGGACATGCCAGGTAAATTCGCCTGTTTGA
- Protein Sequence
- MSTPLGDMSPILASPNSSMLSSNIIGNVSTTTTTSTTMTARNNISVTSIKCEENVRPPSAPAAITTTTNNSTLNGIPNSNNFFNGGIRISVPKVEDSDESESELSTIENSKVNRRSNMTNKNGPRPMSWEGELSEAEDLMDTENSVSNDKQFEDSQMSTKDDSRPCANIKPEFDQISVETGAGVIFTSASSKKFQSDIVNLKYEPGLTDPSVPSGLNSPLLARSKTNLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHNIYGNFNGSLHHSVLYRPVLDGEGGQSLPPTPRRQDEVIIETDTIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVTISTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLMSPDASCSQTNQRLGINGCMVKSEQPDTSNGNSNSSIGGNNHRTSIPPLLQEIMDVEHLWQYNEGELSRLNQPTSGSTMDPGNLSANPLLASTGLSSNGENTNPDLIANLCTVADHRLYKIVKWCKSLPLFKHISIDDQICLLINSWCELLLFSCCFRSIVTPGEIKISQGKSITLEQAKSSGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELREPVKVRESQEKALQALQAYTLAHYPDSPAKFGELLLRIPELQRTCQVNSPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00424727;
- 90% Identity
- iTF_00424727;
- 80% Identity
- iTF_00453651;