Dqua004810.1
Basic Information
- Insect
- Dinoponera quadriceps
- Gene Symbol
- ZFX
- Assembly
- GCA_001313825.1
- Location
- NW:83384-93956[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.3 77 3.3 0.1 3 23 16 36 15 36 0.94 2 15 9 5.3e+02 0.6 4.2 1 23 929 952 929 952 0.80 3 15 0.00072 0.043 13.5 2.0 2 23 1036 1058 1035 1058 0.96 4 15 0.0042 0.25 11.1 0.2 2 23 1071 1092 1071 1092 0.98 5 15 1.4e-05 0.00083 18.9 2.3 2 23 1095 1116 1094 1116 0.97 6 15 0.0098 0.58 10.0 0.3 1 23 1122 1144 1122 1144 0.95 7 15 2.8e-05 0.0017 18.0 4.4 2 23 1151 1172 1150 1173 0.95 8 15 0.086 5.1 7.0 3.7 5 23 1186 1204 1185 1204 0.97 9 15 1.7e-05 0.001 18.6 1.5 3 23 1211 1232 1210 1232 0.97 10 15 0.008 0.47 10.3 0.3 2 23 1248 1268 1247 1268 0.97 11 15 5.3e-05 0.0031 17.1 0.7 1 20 1274 1293 1274 1296 0.92 12 15 6.6e-05 0.0039 16.8 2.7 1 23 1304 1326 1304 1326 0.99 13 15 0.0018 0.11 12.3 3.2 1 23 1332 1354 1332 1354 0.97 14 15 3.3e-06 0.0002 20.9 3.9 1 23 1360 1382 1360 1382 0.99 15 15 0.0014 0.084 12.6 6.5 1 23 1388 1410 1388 1411 0.96
Sequence Information
- Coding Sequence
- ATGGAGCTAAACGGCGTGGGTGCGCCCATTGTCGGCGCCGTGGCCTGTCCCGTCTGTACCTTGTATCTACGCGAAGGCATCAGTCTGCAGAAGCACCTGGACACCCATCCCAAGGAACAAGTGATAGATGCTCTTATCAAAGCCAGTTCCTCCTCATTGCAACCGCAGCAACAAgtacaacagcagcagcagcaacaacaacaacaacagaaCGCATCGACAGCATCAGCACCAGCATTAGTATCGCTGCCACAAGCTACGCCTCAGGGCTCCGCTACTATACAAACGCCTCAAGCGTCATCCCAGGTATCGCAAAATGCACATATCCCAGCTCACTCGCCGTATCCCATAGGACCCATCTTCGAGTGCCCGCCTATAAGCACCATGATGCCGCCGCAGTTCACCTCGTTCAGTTATCAGCAGTTTGTGAACAACGGGACCATGATGATACCGCAGGCGTACGCGATGGCGCCGCAAACCAATCAGATGATGCAAATGCTGTACAGTCCGTACGGTATGTACCAGCAGCAACAAATACCCACCGTCCAAATGATCTCACCGGTTACAGCTATTCCTGGCGCTACTCGAATCAGACCGGTGGCCACGATGGCCGCGGAGAACAGGGCTACTGTGGCGGTTCCTATGAGCAGTCCTGAGCCGAAGCAAATTTTGCCTGAGATCCTGCCGGAGCCCGAGTCCGGGCAAGTTTTATCGAACCTGCCGGCTTCGCCTCTGTTGCAGAGCGAGAACACGACGACCGTGAGgtcgtcgcgcgaagaagCCGATGGCAACAATGCGCTGCAAATGGATCACAGGATGCAGCGGACGCCGAGTTCCACACCTCCCGGCGAGAGCATAGTGCAGCACGAGTACAATAGCATTCCTAGATCCATCGCGATCACCTGCACCATAAACAGCAGCGGTGTAAACGACAAGGTAGAGATGGTGCTGCCGGACATAcaggacgaggaggagccgTTGGACGTCGGGCCCGCGGACCTGCAGTGCGCATCCGTGGCATATGAGCAGCCGGAGGACGCGCAGCAGTTCGTGCAACAGGTCGCGGAGGAAGAAGGATACGCGAGCGACAAGGAGATCGACATGTCGAGCGACGCGATCGACCCTGTGGCTTGCGAAACGGAAGCGGTGTGCGACGAGAGGCCGACGAGTTGCGGCGCCACCGACGATGATGACACACCGCGGGAAGCGTCGGTGAACGACGCGAAAGAGCCGGTTCAGCCCGAGGTGGAGTCCCAGTTGGAGAATCTTTTGATAACTATCATAGAGACGGAGTTCAGCGGCACCTCCTCGCAGAAGGAAGCCCAAGACGTTCATCAGGGGGAGAGGTTggacgagaaggagaaagtCATGGCGGACAGGGTGGAGAGTGTGATTCACGATACGGTGATGACGACCCTCGGCTGCCACGAGAACGACCATATATTACCCGATATGCAGGAGAATGACGCGGAGTGCCCGAACGATTATGTAGATAATGAACTGGAGAAAACTTACCAGCACAGGCACGTTAGATCAGCGCCCCCGTCTCCCTTTGCGAAGAAGGAGCCTGTTTTCCGAGAGGACGCCGTCGGTTCCTCGCGCCACGGGGCCTACTTCGAACGGCCGCGAGTCGGTTCGTGCGACAATCTCATTCTCTACCTgcgggacgacgacgaaaaggTGGAGGACGCGGAGGACAACTTCGACGAGGCGGACATGGAGATTGAGGAAATTCCCAGTCCGCACACGCCTTTCGCGAGATACAGCAACGGGAGCGCGGAATGCGTCCGATCGCACACCCCGCTGTCCGCGATTAGTGGTATATCTGTGTTAAGAGTCAGGACGGATCTCAGCAAGCCCTGTTCACCCGCGTCTGTGCATTCCTTCTGTCACGTGGACAGTGACAGCTTGAGCCACGACGAGGACAGCAACAGCGGTATAGATAATAATGTCATAGAGAAAGATCCGATTGACTGTTCTCAGGTCGAAGAGAAAATTAAGACTGATCATCAGCAGCAGGCAATGAGCACAGTGTGCGAGAGTACTGATAAGGTCCAGGAATCGGGTTACGTGTATCACCATCACcatcaccatcaccaccaccatcaccagtCGGTGATAACCGAGCACGTCAGTTCGTTTTCCGTCAATCATTCGCAGCAGCCGCAGCAGCCCGTCTTAACGCACGAGTCGTATTCCATGACCAGCTCCAAGACACACAGCCTGTTAAATCTGTCCGAGTCGATTAATCCCACAACCAGTACCGAATCCAAGAGTTTTCACACCACCGCCAAGTCACTGATGCCGAAGCAACCGATGGAGCTACTCAATATAAACGAGGACGCTCACGCCGGGCCGATGAATGTTTTTGAATTCGAAGGACTACAGATCATAGTTCCTAGTACATTTATAAGTGACTCGTCCCAGAAAGCAGTGAGTGCGACCAGCCAGCAATCCATGGCCAGCAGCGAGGGTGCAGTAGGTATCGATGAGGAAGTGAAGAGCATTAACATGCGAGCGGACGAGACCATGCCGCCCAGGGGTGAATTGTCGGAACAGGAGAGCAACGGTTGTACGGAGCAGTCTGCATGGCAGCTGTACATGGGTCAGGAATCGTCGCGCATGTCCACTTCTTACGACCTCCTGGCGCGAGAAAGCTGGGAGGAGTCCGAAGGGTCCGACAACGAGATCAGCGGGCCGCTGTTGGACAGCAGATCGTTAGCCACGCACTTTACGTCGAGTTTGTTTCTGGACCGGGATCGGAAGACACCGACCAAACGGACGTTCAAGTGTTACCATTGCAGCGAGGTATTCGATTGTCCTAAGGAACGCAGAGTTCACAGCACGACGGTGCACAAGGGAGCGGTGCCCAGCAGCAGTAGGGATCAACTGGATCAGCCAGAGGTGAAGGACATTAAATTGCTTGACAATCGGATGAACGTGTTCGACGACATATTCGTGCCGGGGTTGCACGTGCAACAGATGTACCATCAGCAGCAACCGCTGCTGCACCAGCTCCAACCGCCGCAGCCGTCGGACCTGGGCAAGGCGGAGAACGGCGACCAGAAGATCGACAGTCTGGCGATACCGTCGGCCATCGAGGTAACGTGCGCGATATGCAACCAACGATTCAACAGTGAGAAGTCCCTGCAGGTGCATCACAAGCGTATGCATATCGCCGAGGTGAACAAGCGGATTCGCGAGAACGCCAAATGCCAGATATGCAGCGAGGAATTCCCAACGGTGTTTCTGTTCAACGCCCACCTGAAGATACACCCGCTCGAGTGCGGCCAGTGCGGCAAGTACTTCTACAGGAAGCAGAACTTCAAGCTCCACATGAAACGCCACTTGGGCATCAAGCCGTTTCCCTGCACGGTATGCGACAAGGCGTTCCTCACCAAGCAGAAGCTGGACGAGCACACCAACGGTCACACTGGCAATGCGCCGGTCAAGTGTAGCCTGTGCAACGAGACTTTCCGTAGATACTCGAACTTAACGCAGCACAAGAACCGGCATCACCTCAACATCAAGAAGAAGCTCAAGGACTACATATGCCACTGCGGCGAGGTGTTCCACACGAAGAAGAAGCTGGCTTGGCACAAGGAGACCCACGACGAGAAGCCGAAGGCGTGCACGTACTGCAACGAGAGATTCATCCACATGGCCAGCCTCACGCGTCACATGCGTCGCGCTCACAACCGCCGTTTCGTGCCCGACGCTCaccgcgagagcgagaacgtCGAGTGTCCGATATGCAAGTGTATCTATCTGCGCTCGTCACTGGCGGTGCACATGCGCGTGCACAACGGCGAACGGCCGTACGAGTGTCAGGTATGTTCCAAGGCGTTCAGCACTAAGTGGAACCTGCAGTTGCATAAGTGGACCCACGCGGCGCGCAGCACCAAACCGTTCAAGTGTAATCAGTGTAGCGCCGCGTTCTATCGCCACAGCGACTACACCGCCCATATGAATTCCCATCGGAACGTGCGGCCGTACACGTGCAACTACTGCGGCGCCCAGTTCATACGCAAGTACAACTGCCTGCGACACGTGAAGGAGCACGAGGAAAACAAGGCGTACACGTGCGACGTGTGCAACAAGACCTTCCACCGCTCTTACTATCTCAAGGAGCACCTGCGCGTACACTCCGGCGCGCGGCCGTACACGTGTCACATCTGCGGCAAGACCAGCGGCACCAAGTCCAATCACAACAAGCATGTTAGGATTCACCACGCGCGCGAGCCTGTAAATACCGAAAACTAA
- Protein Sequence
- MELNGVGAPIVGAVACPVCTLYLREGISLQKHLDTHPKEQVIDALIKASSSSLQPQQQVQQQQQQQQQQQNASTASAPALVSLPQATPQGSATIQTPQASSQVSQNAHIPAHSPYPIGPIFECPPISTMMPPQFTSFSYQQFVNNGTMMIPQAYAMAPQTNQMMQMLYSPYGMYQQQQIPTVQMISPVTAIPGATRIRPVATMAAENRATVAVPMSSPEPKQILPEILPEPESGQVLSNLPASPLLQSENTTTVRSSREEADGNNALQMDHRMQRTPSSTPPGESIVQHEYNSIPRSIAITCTINSSGVNDKVEMVLPDIQDEEEPLDVGPADLQCASVAYEQPEDAQQFVQQVAEEEGYASDKEIDMSSDAIDPVACETEAVCDERPTSCGATDDDDTPREASVNDAKEPVQPEVESQLENLLITIIETEFSGTSSQKEAQDVHQGERLDEKEKVMADRVESVIHDTVMTTLGCHENDHILPDMQENDAECPNDYVDNELEKTYQHRHVRSAPPSPFAKKEPVFREDAVGSSRHGAYFERPRVGSCDNLILYLRDDDEKVEDAEDNFDEADMEIEEIPSPHTPFARYSNGSAECVRSHTPLSAISGISVLRVRTDLSKPCSPASVHSFCHVDSDSLSHDEDSNSGIDNNVIEKDPIDCSQVEEKIKTDHQQQAMSTVCESTDKVQESGYVYHHHHHHHHHHHQSVITEHVSSFSVNHSQQPQQPVLTHESYSMTSSKTHSLLNLSESINPTTSTESKSFHTTAKSLMPKQPMELLNINEDAHAGPMNVFEFEGLQIIVPSTFISDSSQKAVSATSQQSMASSEGAVGIDEEVKSINMRADETMPPRGELSEQESNGCTEQSAWQLYMGQESSRMSTSYDLLARESWEESEGSDNEISGPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCYHCSEVFDCPKERRVHSTTVHKGAVPSSSRDQLDQPEVKDIKLLDNRMNVFDDIFVPGLHVQQMYHQQQPLLHQLQPPQPSDLGKAENGDQKIDSLAIPSAIEVTCAICNQRFNSEKSLQVHHKRMHIAEVNKRIRENAKCQICSEEFPTVFLFNAHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCSLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAHRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKTSGTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01087400;
- 90% Identity
- -
- 80% Identity
- -