Dqua001119.1
Basic Information
- Insect
- Dinoponera quadriceps
- Gene Symbol
- Hr39
- Assembly
- GCA_001313825.1
- Location
- NW:5204977-5229732[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4 1e+04 -5.8 7.0 136 170 37 68 23 111 0.56 2 4 4 1e+04 -19.7 26.3 76 164 275 393 222 528 0.60 3 4 8.3e-08 0.00021 20.0 0.0 1 21 604 624 604 628 0.92 4 4 3.3e-69 8.5e-66 222.2 0.2 199 408 793 997 770 997 0.93
Sequence Information
- Coding Sequence
- ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGACCAGGGCCCGGATCGGACGGCGGCTGGTGGCCGTCCACGCAGACCTGGAAGTCAACGGCGGCCGTTTCGTCGAACTCGTCGACCTCCACTCCGGCGGCAGGTTCCTCGTCCGTCTCTGTTTCCTGCGCCAGCTCGTCCGCGACGAGCTCCTCCACCTCGACCATCTCGTCCGCGACCTGTTGCCCCTCGTCTTGCATCGGTGTATCCTGCACGATGAGCCCGACCCGTTCGACGGAGACGGAGAAAAACGTATCCATCACGACTATTAACGTACCCCCCAGTCAAGAGATGCACGATGATAAAGGAGTATGTAAATATCTGGGAGGACAGAATGGTGTGACGGTGTCGGTAGTATCGACTTCCGTATTGGGATGTGGAAACACAAACGCCGTCCCGACATCCGGGTTATGCGCGAACGCTGGGCCGCACAACATCGGGATCGGCATTCTGGCCGCGAACACGGCGGACATCGACGATCCCGAGGATAGCGACGGCGAGATCAGCAAAATCGACTTCCGAGGCGTCAATCTACGTTCAAAGAAGAAACGTGACGTGTCCGGTAACCAGAACGGCGACAAGATTGGTGACGGGGACGTGAACGGTGACGGTGGTGGATGCTGCGACGGCAATGACAACTCACAACAGCAACCTGAGAGACCCATGTCGTGGGAGGGGGAACTGTCGGACCAAGAAATGTCTTCCAATACGATTACCGATCAGGACGATCATAAAGAAATCTCCATGGAAGGGGTACAAGTGTGCAGCACGAGTCCCGAGCCTATGGAGCAGAAGTTTCAGATCAAATCGGAGCCGGATTTTCGATCCAGCACGGGTTTCACAATAGGATCCTTTCACGACGCCGGGCTGCCCATGACACACAATCAACAAttgcagcaacaacagcaacaacagcgGGCTATTGAGACTCTCGAACAGACTCAGCAAAACGATCTACCACTTCTCGTAGGTAAACTCCTCGGCGGATACAACAGTTCGACGCCTAATCACAGTCCCGTTCTGAATCCGCGGCATCATCTGACGAAACACAGTCACACCAGATCGCAGGTGCCGTCGCCGGATTCCGCCATTCATTCCGCTTATAGCGTCTTCAGCTCGCCGACACAGAGTCCTCACGCGGCGCGACATTCCGCCTTAGGCGCGGGCAGCCCGATACcctcctcgtcgttgtcgctcTCCCGGCACAGCTTCAACAATTCGACCTCCTCGCTGTCCCTCTCGCTGTCGCACTCGCTCTCGAGAAACAACTCGGACGCGTCCAGCAGCTGCTACAGCTACGGCTCGCTCAGCCCGCCCACTCATTCACCCGTCCAGCAGCCGCGACATCCGCACTCGCACTCGCAGCATCATCAGCATCAGGTGGCGCAAGGTAGCCCGCTTCATCTGCCGGCGTCATCCGCAGTCACGGGTCATCATTACTCGTCCTCCTCTGTACCAGGGTCCGAGCTGTCCTCGGATGGACATGCGGCCACGGAGGATCAGGAGGACTGTAGGATACCGTCTGCGCCGTCTGGCATCTCCACCAGGCAGCAACTGATCAACAGCCCCTGCCCGATCTGCGGCGACAAGATAAGCGGTTTTCACTACGGCATCTTCTCGTGCGAGTCGTGTAAGGGCTTCTTCAAGCGCACCGTCCAGAATCGCAAGAACTATGTGTGCCTTAGAGGCGCAGGTTGCCCGGTCACCGTGGCCACAAGGAAGAAGTGCCCAGCCTGCCGCTTCGACAAGTGCCTCAACATGGGTATGAAGCTCGAGGCGATCAGGGAGGATCGTACCAGAGGTGGTAGGAGCACTTATCAATGCACGTACACCTTACCGGCGAATCTCGTTGGCAGTCCTGCCGGCGGTATGACCGGCGAGAAGCTCACTACGGCCGGCAATTGCAGTCCGGCGCCGGCTGGCAGCGAACACCATTATCCCGTTCGACATCATTCGAATCATTCTCACAAGATGCAGGTGGTGCCGCAGCTCTTGCAAGATATCATGGACGTGGAGCACCTCTGGCATTACAACGACAACGACCGGATAAGCGGTGGCGGTGTGTCCGCTGGAAACATCGTGAGAAACTCCGCTGGTAGTGACGGTATGTTACTCGGTGGGCCTGGAAGTGGGTCGACCGGCACTGCCGCCACTGGTATCGGCGCCGGAGGCGCGGTGGAATGCTCGTCGAACGATTTCGGCAACGTCGACGCTAACAACAGAAGGGGAGACTCGGCGACTACGTGTCCTACCGGCGTCTCGCCCTCCGCCGGGGCGCCCGATCAACGCTCCACGAACAGTAATACCGCGAACAATAGCAATCCTCAGCTCGGCAGTAACTGCAGCAGCAATTCGACGCAACACTCGGACTCGCAAGTGTCCAATCTGTGCAACATCGCGGATCATCGGCTCTACAAGATAGTCAAGTGGTGCAAGAGTCTGCCGCTCTTCAAGAATATCTCGATCGACGATCAAATTTGCCTGTTGATCAACTCCTGGTGCGAATTGCTACTTTTCTCATGCTGCTTTCGCAGCATGAGCACTCCCGGTGAGATAAGAGTGTCTCTCGGCAAGTCGATTACTCTAGAACAAGCGAGGCAGCTTGGTTTAGCGACCTGCATCGAGAGGATGCTCGCTTTCACCAACAATCTGCGAAGGCTGAGAGTAGACCAGTACGAATACGTCGCAATGAAGGTGATCGTGCTGTTAACCTCCGACACAAGCGAGCTAAAAGAGCCTGAGAAGGTCAGAGCTTCTCAGGAGAAAGCCCTTCAAGCACTGCAGCAGTATACAATCGCGAGGTATCCGGAGATGCCCGCTAAGTTTGGCGAATTACTATTGAGAATTCCAGATCTAcaaagaacatgccaagtgGGGAAAGAATTGCTCAGTGAAAAACGCGCCGAGGGCGAAGGCAGCTCGTTTAACCTTCTAATGGAGTTGTTGAGGGGAGATCACTAA
- Protein Sequence
- MSEQNGPSEGPGPGPGSDGGWWPSTQTWKSTAAVSSNSSTSTPAAGSSSVSVSCASSSATSSSTSTISSATCCPSSCIGVSCTMSPTRSTETEKNVSITTINVPPSQEMHDDKGVCKYLGGQNGVTVSVVSTSVLGCGNTNAVPTSGLCANAGPHNIGIGILAANTADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGDKIGDGDVNGDGGGCCDGNDNSQQQPERPMSWEGELSDQEMSSNTITDQDDHKEISMEGVQVCSTSPEPMEQKFQIKSEPDFRSSTGFTIGSFHDAGLPMTHNQQLQQQQQQQRAIETLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHSHSQHHQHQVAQGSPLHLPASSAVTGHHYSSSSVPGSELSSDGHAATEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMTGEKLTTAGNCSPAPAGSEHHYPVRHHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRISGGGVSAGNIVRNSAGSDGMLLGGPGSGSTGTAATGIGAGGAVECSSNDFGNVDANNRRGDSATTCPTGVSPSAGAPDQRSTNSNTANNSNPQLGSNCSSNSTQHSDSQVSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQVGKELLSEKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01267641;
- 90% Identity
- iTF_01087289;
- 80% Identity
- iTF_00452638;