Basic Information

Insect: Dilophus febrilis
Gene Symbol: -
Assembly: GCA_958336335.1
Location: OY284470.1:10773948-10777103[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.09 5.2 8.1 0.7 1 17 145 161 145 162 0.91

2 13 0.00079 0.045 14.6 1.5 2 20 169 187 168 188 0.94

3 13 0.012 0.67 10.9 1.3 2 23 439 460 438 460 0.94

4 13 4.7e-06 0.00027 21.6 0.7 2 23 473 494 473 494 0.97

5 13 1.5e-05 0.00087 20.0 4.7 1 23 500 522 500 522 0.98

6 13 0.0018 0.1 13.5 4.5 2 23 528 550 528 550 0.97

7 13 0.00067 0.039 14.8 1.5 1 23 560 582 560 582 0.98

8 13 0.0027 0.15 12.9 3.2 1 23 588 610 588 610 0.98

9 13 1.7e-06 9.9e-05 23.0 1.9 3 23 619 639 618 639 0.99

10 13 7e-05 0.004 17.9 2.1 1 23 645 667 645 667 0.98

11 13 2e-06 0.00011 22.8 7.2 1 23 673 695 673 695 0.98

12 13 1.7e-05 0.00094 19.9 0.8 1 23 701 723 701 723 0.99

13 13 8.5e-05 0.0049 17.7 1.3 1 23 728 751 728 751 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.09	5.2	8.1	0.7	1	17	145	161	145	162	0.91
2	13	0.00079	0.045	14.6	1.5	2	20	169	187	168	188	0.94
3	13	0.012	0.67	10.9	1.3	2	23	439	460	438	460	0.94
4	13	4.7e-06	0.00027	21.6	0.7	2	23	473	494	473	494	0.97
5	13	1.5e-05	0.00087	20.0	4.7	1	23	500	522	500	522	0.98
6	13	0.0018	0.1	13.5	4.5	2	23	528	550	528	550	0.97
7	13	0.00067	0.039	14.8	1.5	1	23	560	582	560	582	0.98
8	13	0.0027	0.15	12.9	3.2	1	23	588	610	588	610	0.98
9	13	1.7e-06	9.9e-05	23.0	1.9	3	23	619	639	618	639	0.99
10	13	7e-05	0.004	17.9	2.1	1	23	645	667	645	667	0.98
11	13	2e-06	0.00011	22.8	7.2	1	23	673	695	673	695	0.98
12	13	1.7e-05	0.00094	19.9	0.8	1	23	701	723	701	723	0.99
13	13	8.5e-05	0.0049	17.7	1.3	1	23	728	751	728	751	0.97

Sequence Information

Coding Sequence: ATGCTTTCAATATATGCTTTTATTGATGGGATTCTGCCCACTGACGCTGACTTCAATAATGTTTCATTCGCACCAACAACTAAACATGCAATATCCGAAATGTTGGAAGCAATTACAGGAAATaagataacatcatcatcagaATTACCAACAAAAATATGCGTGAAATGTACTGATAATGTGAAAATGTCATTTGCATTTCAGCACCAATGTAAGAGatcatttgaattattaacAACAATGTTGAAAGACAAATTATTAACAGACCAATCAAAAGAAATTGATATTAGTGATttgcataatataaatacaccGGGCCTTTTGGAAGATAATATCCAAAAGAATCAGCAATTGAATAGTGATTTCAGCGATAGACCTGCTGAAGCAACGGAAAGAAATCATAAAGACATACAAACTGATGAACGTTTATATTATGAGTGTGAGATGTGTGATTATACATTTTTCGATGAATTTTCACTGAAGCAGAATGCCCATGGCAAATGGGAGTGTAAAACTTGTGGAAAACTGTATAATAAAGAAAGTAATTTACGTAAACATATTTGTTGTAAATCGGAAAACATTGAAACTGAAACTTCAACACCTGCAAATATGACGGTTCCAAACAACGACGAACCATCCGTAATATTACAGAATACTTCCAATATGGCAATACAACCATCAACTAGAGTTACAAGATCAGCAACTAGGAATTCCAAAACTCCAATAAGTGATGCGACGAATTGtgaaataaaagaagaaatattgTCAGATAATGATGTAGATATAGAGGATGTACCTccatttgaaataatatttccAAATGAACTTAATTccatttgtaatattaaaattgaaaataaaactacCGATGAcgcaaataataaaaacgattTGAATTCGAATAATGATAGTGTAGTTTCTGCTGATGATTCGATTGATAATTACGATGATGCTGATGAAGACTATAGGCCTTCTGGAGAAAATCGACAGGTCAAAGATCtgaataatatttcaaattttagCAATGATTTTAATGTAGATGATACTTATAACAGTAATGATGGTAGAAATGTCGCCGATATggtattagaaaaaaatataaaagttaaagACGTGAAACATAAAGACGAATTAATAGCCGAAATACAACGTTCAAATTTGGGGGAAGTCGTTCTtccatcaacaacatcaaatCACGATTTCAACGAACGAGCGATTACAATCAATAAGATTATCGAATCGGGATCAATTGGAAAGAAATCCGAATCAAAATTACCAGCAAAAAAATCgtcaaatcaaattaaaattaaaatatcatgcGATTTGTGCAAACATACATTTGTGGATTTTGATGCATTTACAAGACATAAGGAATGGCATGCACATTTAAAAGCAAGcttgaaattgaaaattcctCAGTGTTCAATTTGCAATGTAgtatttaatagaaaatatgcGTTAACTAGACATATGTATTCTCATAGCAATGAAACACCGTTTGAATGtacaatttgtaaaaaatcatttaaatctCCCTGTAGTTTAAGAGAGCACAAAAAAACCCATGACGAGAAGAGACGAACTTGTACTATCTGTAACATAAAATTTGATCATTCATTCCAGTTAACAACTCATAAGAGGAGGCAACATAACACTAAATTGGTTAAAAAAAGTTCCTACTCTTGTGATATTTGTTCGACGCTGTTTGTTTCGTTTAGGAATATGAAACGCCATATGGAACGACATATCGAACAGCGGCAATATGAATGTAAGGATtgtaagaaaatatttaattcgtATAAAGAAAAAGAGAAACATTCAAAATCACATAGCAAAAATAACACAATACAATTGTGTCCAGAATGTGGTAAGAGTTGTAAAAACAATTCGGCCTATACAATTCATATGCGTCGTCATAACGGAATAAACCCATATCGTTGCAAATTTTGTGAAAAAGCATTTCCACGTAATGTTGATCTGTGTGTACATGAACGGCAACATACGAATTTCAGACCTCATAAATGTTCGGTTTGTGATAAAGCTTTTACTCGGCATCATTCTTTAACAGTACATATGCGAACTCATACCGGTGAACGTCCATATAAATGCACATATTGTCCAAGTGCTTATGCACAATCGCAGgatttaaaaacacatattCGTCGACATACCGGCGAAcgatttaaatgtaatatttgtGATGCTGCATTTATTCAGAATCATCTTCTGTCACAACACAAACGAAATGAGCATGGCATGTCCGTTCCTTTATTAAACGGGcggttaaaaaaatttttgccACCTAGTGATAAACAATGA
Protein Sequence: MLSIYAFIDGILPTDADFNNVSFAPTTKHAISEMLEAITGNKITSSSELPTKICVKCTDNVKMSFAFQHQCKRSFELLTTMLKDKLLTDQSKEIDISDLHNINTPGLLEDNIQKNQQLNSDFSDRPAEATERNHKDIQTDERLYYECEMCDYTFFDEFSLKQNAHGKWECKTCGKLYNKESNLRKHICCKSENIETETSTPANMTVPNNDEPSVILQNTSNMAIQPSTRVTRSATRNSKTPISDATNCEIKEEILSDNDVDIEDVPPFEIIFPNELNSICNIKIENKTTDDANNKNDLNSNNDSVVSADDSIDNYDDADEDYRPSGENRQVKDLNNISNFSNDFNVDDTYNSNDGRNVADMVLEKNIKVKDVKHKDELIAEIQRSNLGEVVLPSTTSNHDFNERAITINKIIESGSIGKKSESKLPAKKSSNQIKIKISCDLCKHTFVDFDAFTRHKEWHAHLKASLKLKIPQCSICNVVFNRKYALTRHMYSHSNETPFECTICKKSFKSPCSLREHKKTHDEKRRTCTICNIKFDHSFQLTTHKRRQHNTKLVKKSSYSCDICSTLFVSFRNMKRHMERHIEQRQYECKDCKKIFNSYKEKEKHSKSHSKNNTIQLCPECGKSCKNNSAYTIHMRRHNGINPYRCKFCEKAFPRNVDLCVHERQHTNFRPHKCSVCDKAFTRHHSLTVHMRTHTGERPYKCTYCPSAYAQSQDLKTHIRRHTGERFKCNICDAAFIQNHLLSQHKRNEHGMSVPLLNGRLKKFLPPSDKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00451249;
90% Identity: -
80% Identity: -