Dfeb010136.1
Basic Information
- Insect
- Dilophus febrilis
- Gene Symbol
- -
- Assembly
- GCA_958336335.1
- Location
- OY284470.1:10781807-10784997[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.61 35 5.5 2.5 1 18 145 162 145 162 0.92 2 14 0.0018 0.1 13.5 0.7 2 21 171 190 171 191 0.94 3 14 0.00088 0.051 14.5 1.5 2 20 240 258 239 259 0.94 4 14 0.0033 0.19 12.7 0.2 3 23 500 520 498 520 0.94 5 14 1.2e-05 0.00067 20.4 2.1 2 23 528 549 527 549 0.97 6 14 2.4e-06 0.00014 22.5 3.8 1 23 555 577 555 577 0.98 7 14 0.00059 0.034 15.0 1.7 2 23 583 605 583 605 0.96 8 14 0.0002 0.011 16.5 0.5 1 23 615 637 615 637 0.99 9 14 0.0047 0.27 12.2 4.7 1 23 643 665 643 665 0.98 10 14 4.1e-05 0.0024 18.6 0.1 3 23 676 696 675 696 0.99 11 14 0.00014 0.008 17.0 2.1 1 23 702 724 702 724 0.97 12 14 3.1e-08 1.8e-06 28.5 3.3 1 23 730 752 730 752 0.98 13 14 6.9e-06 0.0004 21.1 1.5 1 23 758 780 758 780 0.99 14 14 0.00012 0.0071 17.1 1.8 1 23 785 808 785 808 0.97
Sequence Information
- Coding Sequence
- ATGCTTTCAATATATGCTTTTATTGATGGGATTCTGCCCACTGACGCTGACTTCAATAATGTTTCATTCGCACCAACAACTAAACATGCAATATCCGAAATGTTGGAAGCAATTACAGGAAATaagataacatcatcatcagaATTACCAACAAAAATATGCGTGAAATGTACTGATAATGTGAAAATGTCATTTGCATTTCAGCACCAATGTAAGAgatcatttgaaatattaacaTCAATGTTGAAAGACAAATTATTAACAGACCAATCGATAGAAATTGATATAAGTGGTttgcataatataaatactcCGGACCTTTTGGAAGATAATATCCAAAAGAATCAGCAATTGAATAGTGACTTCAGCGATAGACCTGCTGAAGCAACGGAAAGAAATCATAAAGAAATACAAACCGATGAACGTTTATATTATGAGTGTGAGATGTGTGATTGTACATTTTTCGATGAATTTTCACTGAAGAAGTCTAATAAATCTGGCGTTGAAAGAGAATGTAAAGAATGTAAAAAGATATTTGGTACAAACCAATCATTTATACATCACATTAAAGTGTTTGAGATGTGTGgtaaaaatttggaaaatattaaaaaagcTAAACGAATTACTGACGCCAATATAAgacatcaaaataaaattcgtGCAAATGAAGATCAATTTGACATAATAGTAGTACAGCAGAATGTCCATGGCAAATGGGAGTGTAAAACTTGTGGAAAACTGTATAATAAAGAAAGTAATTTACGTAAACATATTTGTTGTAAATCGGAAAACATTGAAACTGAAACTTCAACACCTGCAAATATGACGGTTCCAAACAACGACGAACCATCCGTAATATTACAGAATACTTCCAATATGGCAATAAAACCACCAACTAGAGTTACAAGATCAGCAACTAGGAATTCCAAAACTCCAATAAGTGATGCGACGAATTGtgaaataaaagaagaaatattgTCAGATAATGATGCAGACATAGAGGATGGAACTccatttgaaataatatttacaaatgaaCTTAATTccatttgtaatattaaaattgaaaataaaactacCGATGACGCAAATATTAAAAACGATTTGAATTCGAATAATGATGGTTTAGTTTCTGCTTATGATTCGATTgataattatgataaaaattataacccTTTGATAAACACACAACAGATCAATAATTCAAACTCCAGCAATGATTTTAATGTAGAAGATAGTTATAACAgtgatgaggatgatgatgatgatgaatataatgaaaatgtcGACGATatgatatttgaaaaaaaaaaaaaagttaaaaatacGAAACATAAAGACGAATTATTGGCTGAAATACAACATTCAAATTTGAGGGAACCCGTTCTTCaatcaacaacatcaaatCACGATTTCAACGAACCAGCGATTACAGTCAATAAGATTATCCAATCGGAATCAATTAACAAAAACTTGTcaactaaaattaaaatagcATGCGATTTATGCACTAAAACATTTGTTGATTTTGGGGCATTTACAAGACATAAGGAATGGCATACAAATATAAAAGCAAACACGAAATGTTCAGTTTGTAACGCACAATTTACAAGAAAATCTTTGTTAAAAAGACATATGTATTCCCACAGCAATGAAACACCGTTTGAATGtacaatttgtaaaaaatcatttaaatctCCCTATCGTTTAAAAAAGCACACAAAAACCCATGACGAGAAGAGGCGAACTTGTACTAtctgtaatataaaatttgataattcATTCCAgttaacagctcataatagGAGGAAACATAACCCTGAATTGGTTAACCACAGTTCCTACGTTTGTGATATTTGTTCGGCGTTGTTTGTTACATTTGGAAATATGAAACGCCATATGAAACGACATATAGAACAGCGACAATATGAATGTAAACATTGTAAGCAAACATTTAATTCGTATAAAGAAAAAGAGAAACATTTAATTTCACATAggaaaaataaaggaaaaaataataatttgtgtCCAGAATGTGGTAAAGGTTTTAGAGGCGACTGGAACTTTATAGTTCATATGCGTCGTCATAACGGTATAAAACCATTTCCTTGCAAATTTTGTGAAAAAGCATTTCCACGTTCCGCGGATCTCCACGCACATGAACGGCATCATACCAATTTTAGGCCACATAAATGTACAATTTGTGATAAAGCATTCACTCGGCCCTACTACTTAACAACACACATGCGAACTCATACCGGTGAACGTCCATATAAATGCACATATTGTCCAAATGCTTATACACAATCGCAGGATTTAAAAACACACATTCGTCGACATACCGGCGAAcgatttaaatgtaatatttgtGATGCTATGTTTATTCAGAATCATCTTCTGTCACAACACAAACGAAATGAGCATGGTATGTCCATTCCTGTTGTACACGGGcggttaaaaaaatgtttgccGCCTAATGATAAACAAAGAAGTATTGGCACAGCTGATGGATCATCAACGTTAATACAATCAACTGTTCCATTCCATTTGGATGGCCTTTTATAA
- Protein Sequence
- MLSIYAFIDGILPTDADFNNVSFAPTTKHAISEMLEAITGNKITSSSELPTKICVKCTDNVKMSFAFQHQCKRSFEILTSMLKDKLLTDQSIEIDISGLHNINTPDLLEDNIQKNQQLNSDFSDRPAEATERNHKEIQTDERLYYECEMCDCTFFDEFSLKKSNKSGVERECKECKKIFGTNQSFIHHIKVFEMCGKNLENIKKAKRITDANIRHQNKIRANEDQFDIIVVQQNVHGKWECKTCGKLYNKESNLRKHICCKSENIETETSTPANMTVPNNDEPSVILQNTSNMAIKPPTRVTRSATRNSKTPISDATNCEIKEEILSDNDADIEDGTPFEIIFTNELNSICNIKIENKTTDDANIKNDLNSNNDGLVSAYDSIDNYDKNYNPLINTQQINNSNSSNDFNVEDSYNSDEDDDDDEYNENVDDMIFEKKKKVKNTKHKDELLAEIQHSNLREPVLQSTTSNHDFNEPAITVNKIIQSESINKNLSTKIKIACDLCTKTFVDFGAFTRHKEWHTNIKANTKCSVCNAQFTRKSLLKRHMYSHSNETPFECTICKKSFKSPYRLKKHTKTHDEKRRTCTICNIKFDNSFQLTAHNRRKHNPELVNHSSYVCDICSALFVTFGNMKRHMKRHIEQRQYECKHCKQTFNSYKEKEKHLISHRKNKGKNNNLCPECGKGFRGDWNFIVHMRRHNGIKPFPCKFCEKAFPRSADLHAHERHHTNFRPHKCTICDKAFTRPYYLTTHMRTHTGERPYKCTYCPNAYTQSQDLKTHIRRHTGERFKCNICDAMFIQNHLLSQHKRNEHGMSIPVVHGRLKKCLPPNDKQRSIGTADGSSTLIQSTVPFHLDGLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00451249;
- 90% Identity
- iTF_00451234;
- 80% Identity
- -