Dfeb003661.1
Basic Information
- Insect
- Dilophus febrilis
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_958336335.1
- Location
- OY284468.1:39328106-39346691[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.083 2e+03 -1.8 1.7 44 85 142 180 120 201 0.41 2 3 6.9e-106 1.6e-101 339.9 31.0 1 299 371 659 371 660 0.92 3 3 0.031 7.4e+02 -0.4 2.9 218 245 686 713 663 734 0.55
Sequence Information
- Coding Sequence
- atggttcaattaaaatttcaaagtTCATTAATTGGTAAAAAGTTCTTGGTAAACAATTGGGGACCATCGTTAAGTGATTGTCTTGAAATTCAAGCAACATTTCATAAAGGTGTTGCCATCAAAGGGACATGGAAATTAGTaaattatagtgatgatgaaataaaaaaatcacatcatcacattaatattaatgataataatcaaAGTGATATTAACGATGATGGTGATTATGGTACAAGTAGCAGTAACAGCAGTAcagatgataaaaaaaaatcaatcataaGAAatagtgatgatgatgatcgtgatgacgatgatgctgatgatggTAATGAAGAAGAATTTGATTTTAGTTCAAGTGATTTAGAGGATTCATCGtcaaatgatgatgatgatgatgatgaacccaaagaaaatcaaaatcacATTGATGATCAAATTATTACCGATAATGATAATGTTAAATGTATTACATTAAcaactacaacaacaacaacaacatcaacatcaacaacaataattgataataataattcaataaatgacaataaaaattgtgataatcaaaataccaaaaaaattaaaaataatacatccattacaataattaattataatgataataatagtgagattttaaatgataaattaaatgaagATGAACAAACAACAATAGAGGATtcagaaaataataataaaatcatcagtCATCATGAATCAGAAGCTACAGCATTATCACAAATCGATCCTATGGAAACGTtacaaataatacataaagaaaataatcaattaattcatGATGAAAGTGTTAATTGTACTGAAGCACTAAATACATCAATTATTAATCGTAccaatgataataataatgtcgGCAGcattgttaatttaaattctaataatccaagtgatttaataaatattaaaaataatcataatgatataaataatcataataatattaataataacaataataatagtgatGATGTTATTGGTAATGGACCTCGTAATCGTTCACAACAACATGGAACAACGCCGAACACCGATGATGATCATTTAAGTGATCAAGATGAAGTTATTGTAAATTATCTTGAATTATCTAATGAAATAgCTGAAGCAAGATTAGCACAAAGACGACAGGCAAGAGCAGAAGCACGTGAAATTCGGATGCGAGAATTGGAACGTCAACAAAAAGAACAAGAACAAAATGCTGATCGTGTATTTGATATGCAAACAGCTGCCGGTATTGATCCAATAGCAAGAACAAGATTAGTGACTGGTAGTGGCATTGGTACCGTTGGTATTTTACGTGGTAATTCAATGTCGTCACGTCGTAGCAGTGAAGATTCATTGGAAGAGGAAGGACGAAGTTTACGTGATATTCGACACGAGCTTAAGGATGTTGAAGAACGTTTTCGTAAGGCAATGATAGCAAATGCTCAATTGGATAATGAACGGGCTTCACAATCATATCAAATACAATCGTTAAAAGATAAACTGGAGGAAATCGAAGAGGAAAATGCACAATTACAACGTGAACATAGAAATAAATGCCGTGATCATGATGCATTAAAACgaaataatgataaattaaatgatgatttaaaattagTACAGGGACAATTAAATGAACGAGATACATTAATAGCCGAACAAGgtttaacaataattattgttGAAAATGATGATGGTACAGATGCAAAACGTGTTCTAGTCAGTGTTGAAAATGCACAATTATTAGATTCTGTTCAAGGATCATTAGatgttcgacttaagaaaatttcacaagaaaatcaatcattaaaaaatgaaatacaacaattacatcaacaaattattgatttaagaACACAACGAAAATCAGGATCAGTAAATGGTCCATTAGGTGATGATGATCTTGAAGATGCACAAaGAGAAGCCAATAAATTAATAGCtgagtataaatataaattacaaaaatcaGAACAAGAAATAGCTAGTTTACAGGCAAGTTTAGCCCGTTCAGAAACACAAGTGATTCGATATAAAAGTACATCAGATGCAGCCGAAAAATCAGAATctgaattgaaaattgaacGAAGGAAATTACAAAGAGagAATCGTGAAATGATGGAAAGACTAGAAGAATTGGAAACAgcaaataatcatttattaaaacgattggataagttaaaaaatgcaaaaagtGCATTACTTAAAGATCTCTGA
- Protein Sequence
- MVQLKFQSSLIGKKFLVNNWGPSLSDCLEIQATFHKGVAIKGTWKLVNYSDDEIKKSHHHININDNNQSDINDDGDYGTSSSNSSTDDKKKSIIRNSDDDDRDDDDADDGNEEEFDFSSSDLEDSSSNDDDDDDEPKENQNHIDDQIITDNDNVKCITLTTTTTTTTSTSTTIIDNNNSINDNKNCDNQNTKKIKNNTSITIINYNDNNSEILNDKLNEDEQTTIEDSENNNKIISHHESEATALSQIDPMETLQIIHKENNQLIHDESVNCTEALNTSIINRTNDNNNVGSIVNLNSNNPSDLINIKNNHNDINNHNNINNNNNNSDDVIGNGPRNRSQQHGTTPNTDDDHLSDQDEVIVNYLELSNEIAEARLAQRRQARAEAREIRMRELERQQKEQEQNADRVFDMQTAAGIDPIARTRLVTGSGIGTVGILRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQSLKDKLEEIEEENAQLQREHRNKCRDHDALKRNNDKLNDDLKLVQGQLNERDTLIAEQGLTIIIVENDDGTDAKRVLVSVENAQLLDSVQGSLDVRLKKISQENQSLKNEIQQLHQQIIDLRTQRKSGSVNGPLGDDDLEDAQREANKLIAEYKYKLQKSEQEIASLQASLARSETQVIRYKSTSDAAEKSESELKIERRKLQRENREMMERLEELETANNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -