Dcae002768.1
Basic Information
- Insect
- Diloba caeruleocephala
- Gene Symbol
- Kr
- Assembly
- GCA_947459985.1
- Location
- OX381633.1:1632315-1658270[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 6e-05 0.0049 17.8 4.3 1 23 281 303 281 303 0.99 2 11 0.27 22 6.3 0.6 1 23 310 332 310 332 0.96 3 11 0.042 3.5 8.8 0.1 1 23 336 359 336 359 0.98 4 11 0.077 6.3 8.0 7.1 1 23 366 388 366 389 0.96 5 11 1.2e-06 0.0001 23.1 0.5 2 23 395 416 395 416 0.98 6 11 6.6e-06 0.00054 20.8 4.1 1 23 422 444 422 444 0.98 7 11 0.00046 0.038 15.0 2.3 1 22 450 471 450 475 0.93 8 11 0.011 0.92 10.6 0.1 3 23 485 506 483 506 0.96 9 11 0.21 17 6.6 0.0 1 23 512 535 512 535 0.92 10 11 3.2e-06 0.00027 21.8 1.0 1 23 544 566 544 566 0.98 11 11 9e-06 0.00074 20.4 0.7 1 23 572 595 572 595 0.96
Sequence Information
- Coding Sequence
- ATGGAAACTGCCAGTCTAGGTAACGAGGAAGATATAAAACTTGATTTGGATCAGGTGAAATCAATTTGCAGGTGTTGTTTGACAACTGAAAAACGAATGTACAACGCTACATATTTTCGGTCGCTTTTTAAAGATTTGGCCGGGATAAATGTTTTAGAGTCGGATGGTCTTCCTCAATGGTTGTGTTATGAATGTGGCACACTCTTAAAGAAATCTGTAAAGTTTAAGCATAAGATGTTGCGAGCACATAAAATGCTTTATGAGTACTTGACTAGATGTGCACCATTCCCAATAGATGCTCAAGATGAAGAGTTATCAAAATATGCAAGTCCATATCTAACTACCACTTCAACTCTCACTATTGATATATTTGGCAAAGGAAAGATTGGCTACCAGGTCTTAGAGCACGAGAAGCAAATCCAGCTGTCGGGCCTGGACGATATAGAGTTGCCGTTTATTGGTAAAACTGAAGATGATAATGTGAAAAAAGAAACTGACTTCTCCGATTATGAGGATAATATTACATTAGAGGAATTCAGATCAGTTGCAACCAAAATAACTGAAGATGATATAGCTTCACTGCTACAAGAGGCTGACCATGTAGAGATAAAAGAGGAATCGGAAGTAAAGAAGAGAAAGAAAACGAAAAAGAAAGATGTTAAAGTTAAGAAGAAGAAAATTACTGAAGAAACTAAAATTTCTGACGACCAAACAGAAACCAAGTCTTCAATACGCAAGCCTATAGAGTTGGACCCCAAAAAGATTAGAGTGGTAATTCTAAATCCTGAAGAACAAGTCAAGCAAAGAGAGGAAGAAAGTAAGGCAGGACTAAAGTTCCCGTACCAGTGCACTTTATGTCATAAAGGCTTTAACTTTGAGTCTAAACTCCAAAATCATTTGCAAAAGCATAGTCCGTCCCGCGGTTCGTACGAATGCAAACTCTGCCGTATGTATCTCCCTACTTCGTACAGCTTCAGCGTTCACTCGCTGATACACACGAGGAGATACGAGTGCGTCGAGTGTGGTAGACGGATGATCGATCGACCATCGATTATAGACCATTACAGAACTCAACACGAGGGCTTACTCACATTATACACGTGCCATCTTTGCGGAAAAGTGTCCAACAATAACAAAACGCACAGAGGTCACATGCGAAATCACCACGGTGGTGATAGGCCGAAGTGCGATCAGTGTGGGAAGACGTTCGTCAACAAGGACTCCTTAGTAGAACATCAGCAAATTCACCAGGGTATTAAGAATTATGAATGCTCTATATGCGGCAAGCGGTTCAGAACTAGGACGCAAATAAAACACCATCAGTTAAAGCATACAGATGTTAAAGACTACTATTGCGTGGAATGTGATGTTAGATTCAAATCGGCACATAGTCTTCGACAGCATCTTCAGAAGAATCGAAAACATCGGGATAAGCAAAGTTTAAAGTTCGGCTGCGCGCGCTGCGACAAGCGCTACGAGTCGGAGCGCGCGCTGGCGGCGCACGCGCGCGTGCAGCACGAGGGCGAGCGCGCGCACGCGTGCGGCGCGTGCGGCGCGGCGCTGGCGTCGCGCGCCTCGCTCGCCAAGCACGCGCGCGCCGTGCACCTGGGCCGCCGCGCGCCGCCGCGCCACGTGTGCGACACGTGCGGGAAGGCCTTCCGGGGTAAGAGCGTGCTGACGAACCACGTCCGAACACACACAGGTGAAAAGCCGTTCGAGTGCACAGAATGCGGGCGCAAGTTCTCCCAGCAGACGGCGATGCGGACGCACGTGAAGCTGGTGCACCTCAAATTGAGGCGAACCGCTAAGATCAAACCCGAAATGCCGCTAGAAGCTCGCTCGCCAAAGCTGGACGTTTTCAAACCGGAGCCGTCGCTCCTGGAGCCGTGGCGCCAACCCTGCGACGTGTTCTTCCACGTCACTTCTGGGCCCTGA
- Protein Sequence
- METASLGNEEDIKLDLDQVKSICRCCLTTEKRMYNATYFRSLFKDLAGINVLESDGLPQWLCYECGTLLKKSVKFKHKMLRAHKMLYEYLTRCAPFPIDAQDEELSKYASPYLTTTSTLTIDIFGKGKIGYQVLEHEKQIQLSGLDDIELPFIGKTEDDNVKKETDFSDYEDNITLEEFRSVATKITEDDIASLLQEADHVEIKEESEVKKRKKTKKKDVKVKKKKITEETKISDDQTETKSSIRKPIELDPKKIRVVILNPEEQVKQREEESKAGLKFPYQCTLCHKGFNFESKLQNHLQKHSPSRGSYECKLCRMYLPTSYSFSVHSLIHTRRYECVECGRRMIDRPSIIDHYRTQHEGLLTLYTCHLCGKVSNNNKTHRGHMRNHHGGDRPKCDQCGKTFVNKDSLVEHQQIHQGIKNYECSICGKRFRTRTQIKHHQLKHTDVKDYYCVECDVRFKSAHSLRQHLQKNRKHRDKQSLKFGCARCDKRYESERALAAHARVQHEGERAHACGACGAALASRASLAKHARAVHLGRRAPPRHVCDTCGKAFRGKSVLTNHVRTHTGEKPFECTECGRKFSQQTAMRTHVKLVHLKLRRTAKIKPEMPLEARSPKLDVFKPEPSLLEPWRQPCDVFFHVTSGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01533326;
- 90% Identity
- -
- 80% Identity
- -