Basic Information

Insect: Diloba caeruleocephala
Gene Symbol: ham
Assembly: GCA_947459985.1
Location: OX381620.1:15384108-15414113[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.39 32 5.8 0.0 2 23 115 137 115 137 0.95

2 9 0.00094 0.077 14.0 0.2 1 23 144 167 144 167 0.91

3 9 1.6e-08 1.3e-06 29.0 0.1 1 23 173 196 173 196 0.96

4 9 1.4e-06 0.00011 22.9 1.7 1 23 202 224 202 224 0.95

5 9 4.8e-05 0.004 18.1 6.1 1 23 230 252 230 252 0.99

6 9 9.8e-05 0.0081 17.1 0.4 2 21 260 279 259 280 0.94

7 9 1.2e-08 9.5e-07 29.5 0.7 1 23 676 698 676 698 0.98

8 9 4.2e-07 3.4e-05 24.6 1.7 1 23 704 727 704 727 0.97

9 9 1.6e-05 0.0013 19.6 3.2 1 23 733 755 733 755 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.39	32	5.8	0.0	2	23	115	137	115	137	0.95
2	9	0.00094	0.077	14.0	0.2	1	23	144	167	144	167	0.91
3	9	1.6e-08	1.3e-06	29.0	0.1	1	23	173	196	173	196	0.96
4	9	1.4e-06	0.00011	22.9	1.7	1	23	202	224	202	224	0.95
5	9	4.8e-05	0.004	18.1	6.1	1	23	230	252	230	252	0.99
6	9	9.8e-05	0.0081	17.1	0.4	2	21	260	279	259	280	0.94
7	9	1.2e-08	9.5e-07	29.5	0.7	1	23	676	698	676	698	0.98
8	9	4.2e-07	3.4e-05	24.6	1.7	1	23	704	727	704	727	0.97
9	9	1.6e-05	0.0013	19.6	3.2	1	23	733	755	733	755	0.98

Sequence Information

Coding Sequence: ATGCCCGTTCACCCTTCCCCGGGGCGGAGAAAGGTGCGTGACAAGAACGGTGTCGGCGGCTGGCTGGACGCGACCTCCGAGAAGACTAACTGGCTCAAACTGGTTCGCTCTACTAACTACCCGCATGACGTCAACGTACAGCACTTGTTGCTGGCAGGCCAAGTGTGGTACAAGGTGGTGCGCGAGATTCCGTCGGGCCAGGAGTTGCTGCTGGGCCCCCGGACACCGCTGCCGCTGGAAGACATCTTCTCTGTAGACCCAAAGCGAGAGCGTCAGTCTTCCATCGAGAAGTTCAGCTCGCTGCCTCAGACGGAAGACGAGGACCGGGAGGACGCTGAGCCTCGGTGCAGCTTCTGCGACATACCCTTTCCTGATATTGATATTCTCGATCGCCACTTGATAACGGAGCACGATCAACCAGCCGCTGCTTTTCTCTGTGAACTGTGTAACAGAGCTTACAGCACTCGCGCGCTGCTATTGCGGCACCGTGCGCTCGCGCATACTGACATCAGAAAGTACCCCTGCGAGAATTGTCCTAAGGTATTTACCGATCCTTCCAACCTCCAGCGCCACATTCGCGCGCAGCACGTGGGCGCTCGCAGCCACGCATGTCCTGAGTGCGGCAAGACGTTCGCCACCTCTTCCGGCCTCAAACAGCACACACACATACACTCCAGTGTCAAGCCGTTCCAGTGCAAGGTCTGCTTTAAGGCTTACACACAGTTTTCCAACCTCTGTCGTCACAAGCGCATGCATGTCGCTTGCAGAGCACTAGTTGAATGTGGCAAATGTGGCCAGTCCTTTACTTCTTACGCATCTCTTACTAAACACAAGAGGTTCTGTGACACCGCTGCCGCTGCTTCAGTGAATCTTCGAGGACAAATGCCCCAAGGGTTATCGCAGTTACCGTCTCTACCAAACGTCGGGATGAATACTCCAAACAACACCAATCCCTTCCCGATGTACAGGGGACCAACTCTACCCCTTCCTTACAATACATTTGCTCACTACCCAGCTTTGTTTTCTGCGGCCGCCGCTGCTTGCCCACCAGAATTCCTCAGTCCTTTACTCTTCAATGTACAAGGAGCAAGACTCGCGATGGAACATGATATTGCCATGTCAAATGCTAATTTAGTTTCCAAACATCAGGAAGGCCGCCTATCAGTAAAAAGCATGGACAGTTCAAATTCTTTGGACGAAAGCAAGAAGTCTAAAGATTTAGATTTTGACACTAAAAGAGATGGTTACAGTTCAGACAGGGCTACGCCCAATAAATCTCAGAGACTGTATTCAAAACAATCACCTCCATCAGGCGAGGAAGCATCTTCTCAACAACGACCGTCACCAGTGATGCCACTCCCTACACCGATTGTTCCATTTAATTTTACTAGGGATGAGATGAAACGGAAGTCACCGTACAACTTCTCTGTCCAGCTCAATAATAATGATATTCAACGAAATAAGTTAGACTCTCCATTACCTAAAGATTTGTCCAAAAACGTTATCGAAGACGATAAGATCTCAGAATATTCTGATGTTGAAGAAGACACAAAAAAAGACGAAGGTGACCAACCCCTCGATTTATCAGTGACAAGGAAGCAGAGTGATAAAGATTCTGAGGCAGATCACGACGATCGATCTTTCCGCAACTCAGTCAAGTCTTATTCGCCTCCTGAAAGTCCACTTGAGCGCAGTAAAACTCCTGAAAACGACACGACAGATGTTGACGTGGAAGGTGTAGAACCTAAAAGAGAGGAATCGCCACCGCAACTCGTTTCGACGCCCCTCGCATTCCCCATGCCCGTTCATCCACAGCATAGTAACATAATAGATGCCATGTACCGACCTAGATTCCCATCTTTCCACCATTCTGAATCGATTCTGAACTCATCGCACTCCCCTTATGTCCCAAGTCCGTTCAATTTTTTATCCCCACTTCTCGGTACTGATGGACCTGACAGACAACCTAGCGCGTATGCTAAGTTCCAAGAGCTGAGTGCTGGGTCTGGGAAATTGCGTGATCGATACGCTTGTAAATTCTGCGGAAAAGTGTTTCCTAGGAGCGCGAACCTTACTCGGCACTTGCGCACTCACACTGGAGAGCAACCATACAAGTGCAAGTACTGTGAGCGTTCGTTTTCAATTTCATCGAACCTTCAAAGGCACGTGAGAAATATTCACAACAAAGAGAGGCCATTTCGGTGTCCCTTATGCGAGAGATGTTTCGGGCAGCAGACTAATCTCGACCGTCACTTGAAGAAGCACGAAGCTGAGGGCGGAGATTCTCCTAGCTCTGCGGATACGGAAAGGGAAGACACGTACTTCGATGATATCAGGTCGTTCATGGGTAAGGTGACATGTTCACCGGGCGCGCGATCTCCAGCCGCTACACCCCCTCATGGTGCGCACGTGTCGCACGGCGCGCACGGTACGCATGGTGCGCATAGTTCGCACGGAGCTCACACAGGCGCGCGGCCGCCGCTGGCAATCTCCACCTAG
Protein Sequence: MPVHPSPGRRKVRDKNGVGGWLDATSEKTNWLKLVRSTNYPHDVNVQHLLLAGQVWYKVVREIPSGQELLLGPRTPLPLEDIFSVDPKRERQSSIEKFSSLPQTEDEDREDAEPRCSFCDIPFPDIDILDRHLITEHDQPAAAFLCELCNRAYSTRALLLRHRALAHTDIRKYPCENCPKVFTDPSNLQRHIRAQHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCKVCFKAYTQFSNLCRHKRMHVACRALVECGKCGQSFTSYASLTKHKRFCDTAAAASVNLRGQMPQGLSQLPSLPNVGMNTPNNTNPFPMYRGPTLPLPYNTFAHYPALFSAAAAACPPEFLSPLLFNVQGARLAMEHDIAMSNANLVSKHQEGRLSVKSMDSSNSLDESKKSKDLDFDTKRDGYSSDRATPNKSQRLYSKQSPPSGEEASSQQRPSPVMPLPTPIVPFNFTRDEMKRKSPYNFSVQLNNNDIQRNKLDSPLPKDLSKNVIEDDKISEYSDVEEDTKKDEGDQPLDLSVTRKQSDKDSEADHDDRSFRNSVKSYSPPESPLERSKTPENDTTDVDVEGVEPKREESPPQLVSTPLAFPMPVHPQHSNIIDAMYRPRFPSFHHSESILNSSHSPYVPSPFNFLSPLLGTDGPDRQPSAYAKFQELSAGSGKLRDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFRCPLCERCFGQQTNLDRHLKKHEAEGGDSPSSADTEREDTYFDDIRSFMGKVTCSPGARSPAATPPHGAHVSHGAHGTHGAHSSHGAHTGARPPLAIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00441779;
90% Identity: iTF_00177403;
80% Identity: -