Dcae023236.2
Basic Information
- Insect
- Diloba caeruleocephala
- Gene Symbol
- -
- Assembly
- GCA_947459985.1
- Location
- OX381614.1:27274394-27290126[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.6e-12 7.4e-09 35.7 0.0 4 39 177 213 174 217 0.89 2 4 3.5e-11 3.4e-08 33.6 0.3 2 39 229 266 228 270 0.92 3 4 1.5e-14 1.5e-11 44.3 0.0 2 45 284 328 283 328 0.96 4 4 2.7e-18 2.6e-15 56.4 0.0 1 42 335 377 335 379 0.96
Sequence Information
- Coding Sequence
- ATGCCCGGCTACGGACTGTGTCAAGTGAAATGCGAACCGCTCTCGGACGAAGAAGACAGCGACTCACAATTCGCGCACAGTTATCTATCCAGTCAGCTCTCGTCAAAAGCCTGTCCAGTGAAATTAGAATCTGTACGAAACAGGGATGATAGAGTTCCGACGACCTTGCTGCAACACATGGAGAGTAGTGGTCTGGAGGAGTTGGCACCGCTGGCGCCGGCGGGCCCAGCCGCCACACCAGTATGTGTCAAGCAGGAGCGCACTGAGTCGCCTCCTGCTGCCACGCTTGAGACGCTTCAGTCAGCACCGCATAATGCCAAGAGCACGTCACTGCTGGACCGACACGTGGAGTTCATGAACATGAGTGTAGAGCCTGATTCCACGGACTTCTTACCGCTGCTAGCTGTCAAAGATGAGCCCTCGTCTGAAGGTGAGCAACCCCACCTGAGCGGTGAAGATACAAGTGATTCATGCGGTCGGCAAACTTCGCCCGCCCTTCGACACAGCCCAAAGAGCTGGACTCAGCATGATATGGAACAAGCACTGGATGCGCTCAGGAACCACCAGATGAGCCTCACAAAGGCATCAGCGACTTACGGCATACCGTCTACAACGCTCTGGCAGCGAGCACACCGACTGGGTATTGATACGCCTAAGAAGGAAGGAGCTGCTAAGTCTTGGAGTGAAGCGGACCTACGCGGAGCACTACATGCATTGAGGGCCGGCGCTATATCTGCAAATAAGGCCAGCAAAGCTTATGGTATTCCAAGCAGCACACTTTACAAGATAGCGCGCCGAGAAGGCATCCGCCTGTCGGCCCCGTTCAACGCCGCGCCCACCGCGTGGCGCCGCGCAGATCTGCAGCTGGCCTTGGCTTCTATAAGATGCGGGGCCAGCTCTGTGCAACGCGCTGCCACGCAGTACGGGATACCAACTGGGACACTATACGGGAGGTGTAAACGTGAAGGCATTGAACTGTCCCGCTCAAACCCCACGCCTTGGTCTGAAGACGCCATGGGTGAAGCACTGGAGGCCGTCAGAGTGGGACAGATGTCGATAAACCAGGCGGCGATCCACTACAACCTGCCGTACTCGTCGCTGTACGGGAGGTTCAAGAGGTGCAAGTATCACATGCCACCGGGTGTCTCCCAGAATCATCAACAGCCACAGCAAATTCCCCCGAAAAACGAGCTTGAACAACAAACTCACGACATCCAACAATACTACCATCAGGGACCAGCCCACCAGCTGGACGACCCGCATACATACGCACATATGCATGAATACGCACACACACACGACCAGTATGGACAGTACTACCAGGGTTTCAACAGCATCGTGACCAGCTGA
- Protein Sequence
- MPGYGLCQVKCEPLSDEEDSDSQFAHSYLSSQLSSKACPVKLESVRNRDDRVPTTLLQHMESSGLEELAPLAPAGPAATPVCVKQERTESPPAATLETLQSAPHNAKSTSLLDRHVEFMNMSVEPDSTDFLPLLAVKDEPSSEGEQPHLSGEDTSDSCGRQTSPALRHSPKSWTQHDMEQALDALRNHQMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRADLQLALASIRCGASSVQRAATQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYHMPPGVSQNHQQPQQIPPKNELEQQTHDIQQYYHQGPAHQLDDPHTYAHMHEYAHTHDQYGQYYQGFNSIVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00041698;
- 90% Identity
- -
- 80% Identity
- -