Dmen004337.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Diarsia mendica
Gene Symbol
GCFC2
Assembly
GCA_949316265.1
Location
OX438888.1:5560813-5576591[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 3.4e-05 0.98 10.6 0.0 3 41 208 246 206 253 0.91
2 28 0.0025 71 4.5 0.0 18 41 255 278 248 284 0.87
3 28 0.0023 67 4.6 0.0 17 41 286 310 277 314 0.86
4 28 0.0023 67 4.6 0.0 18 41 319 342 311 349 0.87
5 28 0.0024 70 4.5 0.0 18 41 351 374 343 378 0.87
6 28 0.0024 69 4.5 0.0 18 41 383 406 375 411 0.87
7 28 0.0024 68 4.6 0.0 17 41 414 438 406 442 0.86
8 28 0.0023 66 4.6 0.0 17 41 446 470 438 476 0.87
9 28 0.0024 68 4.6 0.0 17 41 478 502 470 506 0.86
10 28 0.0024 70 4.5 0.0 18 41 511 534 503 538 0.87
11 28 0.0024 68 4.6 0.0 17 41 542 566 534 570 0.86
12 28 0.0023 65 4.6 0.0 17 41 574 598 566 605 0.87
13 28 0.0024 68 4.6 0.0 17 41 606 630 598 634 0.86
14 28 0.0024 70 4.5 0.0 18 41 639 662 631 666 0.87
15 28 0.0024 68 4.6 0.0 17 41 670 694 662 698 0.86
16 28 0.0024 68 4.6 0.0 17 41 702 726 694 730 0.86
17 28 0.0024 68 4.6 0.0 17 41 734 758 726 762 0.86
18 28 0.0025 70 4.5 0.0 18 41 767 790 759 794 0.87
19 28 0.0025 70 4.5 0.0 18 41 799 822 791 826 0.87
20 28 0.0024 69 4.5 0.0 18 41 831 854 823 859 0.87
21 28 0.0024 70 4.5 0.0 18 41 863 886 855 890 0.87
22 28 0.0026 74 4.5 0.0 18 41 895 918 888 922 0.87
23 28 0.0024 70 4.5 0.0 18 41 927 950 919 954 0.87
24 28 0.0024 69 4.5 0.0 18 41 959 982 951 987 0.87
25 28 0.0024 70 4.5 0.0 18 41 991 1014 983 1018 0.87
26 28 0.0024 69 4.5 0.0 18 41 1023 1046 1015 1051 0.87
27 28 0.0024 68 4.6 0.0 17 41 1054 1078 1046 1082 0.86
28 28 8.3e-12 2.4e-07 32.3 0.1 17 190 1086 1238 1078 1245 0.70

Sequence Information

Coding Sequence
ATGATCGATCAGCAGAGAAAACATTCTTTAAGCAGTTTGTTTGATCGGTTAGGAGAACTCCAAGTAGAACGCGAAGCAACATCAGAAACACAGCAAGACCTGCGCGAGAGGCTGCTCACTTCGGCAAGGATACGAGAAAGTAGGGCTTCGCGTTGTGGCGAGTTGGATGCGGCTTACAGGAGGGCGCAGGCTATACGAGGATACCTTACTGACCTGATTGAGTGCCTTGATGAGAAGATGCCACAACTGGAGGCGTTAGAAGCTCGTGCGTTGGCGCTACACAAGCGTCGCTGTGAGTTCCTCATCGAGAGGCGGAGAGCTGACCTGAGGGATCAGGCGCAAGATGTCCTCGCACCACCTGGTCGAGCCACGAAAGCAACGGACAACGAAGAGAAGACACGCCGCGCGGCCGAGCGAGAGGGACGGCGACGTGCTAGACGTCTCAAACGTGAGGCCACCGCCGCTGCTGCCGGGACCACGCTGCCGCATCGAGATGGAGACTCCTCGGATGATGAACTGCCTCCGCATGAGATGCATCACTATACACAGGAGAGAGACGCTATCCGTCAGCAATCAGCATCGTTGTTCAGCGACGCTCTCCCCGCGTGGCGCAGTGTATCCGGTGTTTGCAAACGTCTGGCGCGCTGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGGTAAGTAGCAGGCGAGCTCGCGCCACCTCGCTGTACACGGACGCCTACGTGGCCGACTGCCTGCCCAAGCTACTGGCGCCTTACGTCCGACATGAGCTCATACTGTGGAACCCGCTGGCAGATGAAGACAACGAAGATTACGAGAAAATGGATTGGTACAAATGCCTGATGATGTACGGCGTCCGCTCAGAGCGCGGACCAGACTCATCGTCGTCAGGGTCGGAAGGCGAGGTGGAGCCGCAGCCGGTCACGGACAGTTCCGTGCGAGAGGACCCTGACCTGCTGCTGGTGCCTAGCATCATCAGCAGGGTGGTGCTGCCTTGTCTCACAGAACTAGTAACAGTAGCATGGGACCCGATGTCAGTACGTTCGTGCACACGTCTGCGCTCGCTGCTACTACGCGCGGCTACGTTGCCCACGTGTGACGTGTCAGTGCGGCGCCTGGCCGCCACACTGCGCGTGCGACTGGCCAACGCGTTGGGTGCCGATGTGTTCCTGCCTGCGCTGCCGCCGCAGTATGTATATCTGTATTAA
Protein Sequence
MIDQQRKHSLSSLFDRLGELQVEREATSETQQDLRERLLTSARIRESRASRCGELDAAYRRAQAIRGYLTDLIECLDEKMPQLEALEARALALHKRRCEFLIERRRADLRDQAQDVLAPPGRATKATDNEEKTRRAAEREGRRRARRLKREATAAAAGTTLPHRDGDSSDDELPPHEMHHYTQERDAIRQQSASLFSDALPAWRSVSGVCKRLARWRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHEVSSRRARATSLYTDAYVADCLPKLLAPYVRHELILWNPLADEDNEDYEKMDWYKCLMMYGVRSERGPDSSSSGSEGEVEPQPVTDSSVREDPDLLLVPSIISRVVLPCLTELVTVAWDPMSVRSCTRLRSLLLRAATLPTCDVSVRRLAATLRVRLANALGADVFLPALPPQYVYLY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-