Basic Information

Insect: Diarsia dahlii
Gene Symbol: -
Assembly: GCA_949775195.1
Location: OX459217.1:6994615-7008344[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.011 1.4 10.9 0.2 1 23 84 107 84 107 0.96

2 27 0.015 1.9 10.5 0.1 2 23 139 161 138 161 0.96

3 27 0.3 38 6.4 3.5 2 23 184 205 183 205 0.97

4 27 7.4e-07 9.3e-05 24.0 0.3 1 23 209 231 209 231 0.98

5 27 0.22 28 6.8 1.5 1 23 236 259 236 259 0.94

6 27 0.0041 0.51 12.3 1.4 3 23 298 319 297 319 0.95

7 27 6.1e-05 0.0077 18.0 0.9 1 23 325 347 325 347 0.97

8 27 3.8e-05 0.0048 18.7 1.4 1 23 353 375 353 375 0.98

9 27 0.0005 0.063 15.1 0.2 1 21 381 401 381 402 0.96

10 27 0.011 1.4 10.9 0.2 1 23 467 490 467 490 0.96

11 27 0.015 1.9 10.5 0.1 2 23 522 544 521 544 0.96

12 27 0.25 32 6.6 3.6 2 23 567 588 566 588 0.97

13 27 3.6e-06 0.00046 21.9 0.1 1 23 592 614 592 614 0.98

14 27 0.67 84 5.3 1.7 1 22 619 640 619 642 0.88

15 27 0.0012 0.15 14.0 0.4 3 23 681 702 680 702 0.95

16 27 0.0017 0.21 13.5 1.0 1 23 708 730 708 730 0.94

17 27 0.0048 0.6 12.1 1.9 1 23 736 758 736 758 0.98

18 27 0.0005 0.063 15.1 0.2 1 21 764 784 764 785 0.96

19 27 0.011 1.4 10.9 0.2 1 23 850 873 850 873 0.96

20 27 0.015 1.9 10.5 0.1 2 23 905 927 904 927 0.96

21 27 0.3 38 6.4 3.5 2 23 950 971 949 971 0.97

22 27 7.4e-07 9.3e-05 24.0 0.3 1 23 975 997 975 997 0.98

23 27 0.34 43 6.2 2.4 1 23 1002 1025 1002 1025 0.93

24 27 0.00061 0.077 14.9 1.1 3 23 1064 1085 1063 1085 0.95

25 27 6.1e-05 0.0077 18.0 0.9 1 23 1091 1113 1091 1113 0.97

26 27 3.8e-05 0.0048 18.7 1.4 1 23 1119 1141 1119 1141 0.98

27 27 7.8e-05 0.0099 17.7 0.6 1 23 1147 1170 1147 1170 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.011	1.4	10.9	0.2	1	23	84	107	84	107	0.96
2	27	0.015	1.9	10.5	0.1	2	23	139	161	138	161	0.96
3	27	0.3	38	6.4	3.5	2	23	184	205	183	205	0.97
4	27	7.4e-07	9.3e-05	24.0	0.3	1	23	209	231	209	231	0.98
5	27	0.22	28	6.8	1.5	1	23	236	259	236	259	0.94
6	27	0.0041	0.51	12.3	1.4	3	23	298	319	297	319	0.95
7	27	6.1e-05	0.0077	18.0	0.9	1	23	325	347	325	347	0.97
8	27	3.8e-05	0.0048	18.7	1.4	1	23	353	375	353	375	0.98
9	27	0.0005	0.063	15.1	0.2	1	21	381	401	381	402	0.96
10	27	0.011	1.4	10.9	0.2	1	23	467	490	467	490	0.96
11	27	0.015	1.9	10.5	0.1	2	23	522	544	521	544	0.96
12	27	0.25	32	6.6	3.6	2	23	567	588	566	588	0.97
13	27	3.6e-06	0.00046	21.9	0.1	1	23	592	614	592	614	0.98
14	27	0.67	84	5.3	1.7	1	22	619	640	619	642	0.88
15	27	0.0012	0.15	14.0	0.4	3	23	681	702	680	702	0.95
16	27	0.0017	0.21	13.5	1.0	1	23	708	730	708	730	0.94
17	27	0.0048	0.6	12.1	1.9	1	23	736	758	736	758	0.98
18	27	0.0005	0.063	15.1	0.2	1	21	764	784	764	785	0.96
19	27	0.011	1.4	10.9	0.2	1	23	850	873	850	873	0.96
20	27	0.015	1.9	10.5	0.1	2	23	905	927	904	927	0.96
21	27	0.3	38	6.4	3.5	2	23	950	971	949	971	0.97
22	27	7.4e-07	9.3e-05	24.0	0.3	1	23	975	997	975	997	0.98
23	27	0.34	43	6.2	2.4	1	23	1002	1025	1002	1025	0.93
24	27	0.00061	0.077	14.9	1.1	3	23	1064	1085	1063	1085	0.95
25	27	6.1e-05	0.0077	18.0	0.9	1	23	1091	1113	1091	1113	0.97
26	27	3.8e-05	0.0048	18.7	1.4	1	23	1119	1141	1119	1141	0.98
27	27	7.8e-05	0.0099	17.7	0.6	1	23	1147	1170	1147	1170	0.98

Sequence Information

Coding Sequence: ATGCAGGTTCTTGTTTTACGAAGATTACACAGATTGAAGTGTCTCTGTTCAATCAGTACTCGCAACAAACTTACCAAGGCTAGTGAATTAGATGAAGATTATGAACCACCATGGATAAAAAAGGAAAGAAAGGAATCAAGAAGAAGGATCAATGAAACCGAACCAAAAATCACGAAGCAGCGCACAAATCTGAGAGAAATCTTTGCTTGCTCCAATGCTACACCCTTGGTCGGAGTTAATTATCAAGGATATATGTGTGGCTACTGTGACGATCAGTATCAAGACCCAGCAGATCTGAAGAAGCATACACGTGGCAATCATAAAGTAAACCTTTACAACGCAGAAATTCCAAAAACGTATAGAAGTAAAAATATACCAAATGAGTATGGAATGAAGCTAGACATAACTGATTTGCGATGTACGCTTTGCGATACTGACATAGACACATTAGAAAACTTGATGAAACATCTAGAAACGGACCACAAAAGGGTTATGCACATCGACATCAAACACCATATCTTACCGTTCAAGTTTAGTGGTGATACCATGAAATGTTGCATGTGTCCAAGCTTTTTTCAAAAGTTCAGGAGTTTAGTGGAGCATATGCGCATGCATTATAGAAATTATGTCTGCGATGTCTGTGATAAGGGCTACGTCTACAAATCAAATCTTAGGTCACACATGGCCACACATAGAACAGGCGTCTTCAAATGTAGTTCGTGCCCTAAAACTTATTTGAATAATACGAGGTTGAAGAGTCACGAAAATCAAGTTCACGTTAATAAGGGTATGAATGTAAAGTGTGAATACTGTTGTGACAGATTTAGAAATGCTATGAGAAGAGATGAGCATTTGGCAGAAGTACATGGAGTTAAACTGAAGATCGTCAATTGCCGTGCATGCAATAGGATATTTCGTAATAGAAACGCGTTAAGGGTTCACACGAGGCGAGACCATTTGATGGAGAGGCGGTTTAAATGTACAGAATGCGATAAGGCATTTTACCAAGCAGCTAATTTAAAGTTTCACATGGTTAAGCATACAAAAACGAGAGAGTTCCAATGCACCGTGTGCATGAAGTCTTATAGCCGGAAGGAAACTTTAAGACAGCATATGGAAATACACAGTGACGTTAGACGGTTCAAATGTGAGCGTTGCGGTCAAGCATTCGTGCAGAAAGCTAGCTGGAAAGGACATATGAAAAGTACTCGCGACAAACTTACCAAGGCTAGTGAATTAGATGAAGATTATGAACCACCATGGATAAAAAAGGAAAGAAAGGAATCAAGAAGAAGGATCAATGAAACCGAACCAAAAATCACGAAGCAGCGCACAAATCTGAGAGAAATCTTTGCTTGCTCCAATGCTACACCCTTGGTCGGAGTTAATTATCAAGGATATATGTGTGGCTACTGTGACGATCAGTATCAAGACCCAGCAGATCTGAAGAAGCATACACGTGGCAATCATAAAGTAAACCTTTACAACGCAGAAATTCCAAAAACGTATAGAAGTAAAAATATACCAAATGAGTATGGAATGAAGCTAGACATAACTGATTTGCGATGTACGCTTTGCGATACTGACATAGACACATTAGAAAACTTGATGAAACATCTAGAAACGGACCACAAAAGGGTTATGCACATCGACATCAAACACCATATCTTACCGTTCAAGTTTAGTGGTGATACCATGAAATGTTGTATGTGTCCAAGCTTTTTTCAAAAGTTCAAGAGTTTAGTAGAGCATATGCGCATGCATTATAGAAATTATGTCTGCGATGTCTGTGATGAGGGCTACGTCTACAAATCAAATCTCAGGTCACACATGGCCACACATAGAACAGGCGTCTTCAAATGTAGTTCGTGCCCTAAAACTTATTTGAATAATACGAGGTTGAAGAGTCACGAATATCAAGTTCACGTTAATAAGGGTATGAATCTAAAGTGTGAATACTGTTGTGACAGATTTAGAAATGCTATGAGAAGAGATGAGCATTTGGCAGAAGTACATGGAGTAAAACTGAAGATCGTCGATTGCCGTGCATGCAATAAGATATTTCCTAATAGAGACGCGTTAAGGGTTCACACGAGGCGAGATCATTTGATGGAGAGGCGGTTTAAATGTACAGAATGCGATAAGGCATTTTTCCAAGCAGCTGATTTAAAGTTTCACAAAGTAACGCATTCAAAAACCAGAGAGTTCCAATGCACTGTGTGTATGAAGTATTATACTCGGATGACAACTTTAAAACAGCATATGGAAATACATAGTGACGTTAGACGGTTCAAATGTGAGCGTTGCGGTCAAGCATTCGTGCAGAAAGCTAGCTGGAAAGGACATATGAAAAGTACTCGCGACAAACTTACCAAGGCTAGTGAATTAGATGAAGATTATGAACCACCATGGATAAAAAAGGAAAGAAAGGAATCAAGAAGAAGGATCAATGAAACCGAACCAAAAATCACGAAGCAGCGCACAAATCTGAGAGAAATCTTTGCTTGCTCCAATACTACACCCTTGGTCGGAGTTAATTATCAAGGATATATGTGTGGCTACTGTGACGATCAGTATCAAGACCCAGCAGATCTGAAGAAGCATACACGTGGCAATCATAAAGTAAACCTTTACAACGCAGAAATTCCAAAAACGTATAgaagtaaaaaaataccaaaagaGTATGGAATGAAGCTAGACATAACTGATTTGCGATGTACGCTTTGCGATACTGACATAGACACATTAGAAAACTTGATGAAACATCTAGAAACGGACCACAAAAGGGTTATGCACATCGACATCAAACACCATATCTTACCGTTCAAGTTTAGTGGTGATACCATGAAATGTTGCATGTGTCCAAGCTTTTTTCAAAAGTTCAGGAGTTTAGTGGAGCATATGCGCATGCATTATAGAAATTATGTCTGCGATGTCTGTGATAAGGGCTACGTCTACAAATCAAATCTCAGGTCACACATGGCCACACATAGAACAGGCGTCTTCAAATGTAGTTCGTGCCCTAAAACTTATTTGAATAATAAGAGGTTGAAGAATCACGAATATAAAGTTCACGTTAATAAGGGTATGAATCTAAAGTGTGAATACTGTTGTGACAGATTTAGAAATGCTATGAGAAGAGATGAGCATTTGGCAGAAGTACATGGAGTTAAACTGAAGATCGTCAATTGCCGTGCATGCAATAAGATATTTCGTAATAGAGACGCGTTAAGGGTCCACACGAGGCGAGACCATTTGATGGAGAGGCGGTTTAAATGTACAGAATGCGATAAGGCATTTTACCAAGCAGCTAATTTAAAGTTTCACATGGTTAAGCATACAAAAACGAGAGAGTTCCAATGCACCGTGTGCATGAAGTCTTATAGCCGGAAGGAAACTTTAAGACAGCATATGGAAATACACAGTGACGTTAGACGGTTCAAATGTGAGCGTTGCGGTCAAGCATTCGTGCAGAAAGCTAGCTGGAAAGGACATATGAAAAGTAAGCATGGTGAACTGGTCTGA
Protein Sequence: MQVLVLRRLHRLKCLCSISTRNKLTKASELDEDYEPPWIKKERKESRRRINETEPKITKQRTNLREIFACSNATPLVGVNYQGYMCGYCDDQYQDPADLKKHTRGNHKVNLYNAEIPKTYRSKNIPNEYGMKLDITDLRCTLCDTDIDTLENLMKHLETDHKRVMHIDIKHHILPFKFSGDTMKCCMCPSFFQKFRSLVEHMRMHYRNYVCDVCDKGYVYKSNLRSHMATHRTGVFKCSSCPKTYLNNTRLKSHENQVHVNKGMNVKCEYCCDRFRNAMRRDEHLAEVHGVKLKIVNCRACNRIFRNRNALRVHTRRDHLMERRFKCTECDKAFYQAANLKFHMVKHTKTREFQCTVCMKSYSRKETLRQHMEIHSDVRRFKCERCGQAFVQKASWKGHMKSTRDKLTKASELDEDYEPPWIKKERKESRRRINETEPKITKQRTNLREIFACSNATPLVGVNYQGYMCGYCDDQYQDPADLKKHTRGNHKVNLYNAEIPKTYRSKNIPNEYGMKLDITDLRCTLCDTDIDTLENLMKHLETDHKRVMHIDIKHHILPFKFSGDTMKCCMCPSFFQKFKSLVEHMRMHYRNYVCDVCDEGYVYKSNLRSHMATHRTGVFKCSSCPKTYLNNTRLKSHEYQVHVNKGMNLKCEYCCDRFRNAMRRDEHLAEVHGVKLKIVDCRACNKIFPNRDALRVHTRRDHLMERRFKCTECDKAFFQAADLKFHKVTHSKTREFQCTVCMKYYTRMTTLKQHMEIHSDVRRFKCERCGQAFVQKASWKGHMKSTRDKLTKASELDEDYEPPWIKKERKESRRRINETEPKITKQRTNLREIFACSNTTPLVGVNYQGYMCGYCDDQYQDPADLKKHTRGNHKVNLYNAEIPKTYRSKKIPKEYGMKLDITDLRCTLCDTDIDTLENLMKHLETDHKRVMHIDIKHHILPFKFSGDTMKCCMCPSFFQKFRSLVEHMRMHYRNYVCDVCDKGYVYKSNLRSHMATHRTGVFKCSSCPKTYLNNKRLKNHEYKVHVNKGMNLKCEYCCDRFRNAMRRDEHLAEVHGVKLKIVNCRACNKIFRNRDALRVHTRRDHLMERRFKCTECDKAFYQAANLKFHMVKHTKTREFQCTVCMKSYSRKETLRQHMEIHSDVRRFKCERCGQAFVQKASWKGHMKSKHGELV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00447461;
90% Identity: iTF_00447461;
80% Identity: -