Ddah042685.1
Basic Information
- Insect
- Diarsia dahlii
- Gene Symbol
- -
- Assembly
- GCA_949775195.1
- Location
- OX459219.1:8964871-8967255[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.007 21 6.6 2.6 18 43 9 31 6 32 0.94 2 20 0.045 1.4e+02 4.0 0.3 17 44 36 60 32 60 0.80 3 20 0.00064 1.9 9.9 0.1 18 43 68 90 65 91 0.87 4 20 4.4e-05 0.13 13.7 1.5 17 44 98 122 95 122 0.91 5 20 0.00028 0.85 11.1 1.2 18 44 129 152 127 152 0.94 6 20 3.5e-05 0.11 14.0 1.2 15 43 157 182 153 183 0.89 7 20 0.0024 7.5 8.1 0.4 18 44 189 212 185 212 0.90 8 20 0.0055 17 6.9 1.1 17 43 219 242 213 243 0.81 9 20 0.76 2.3e+03 0.1 2.0 12 43 248 276 236 277 0.69 10 20 0.76 2.3e+03 0.1 0.4 15 26 299 310 283 325 0.63 11 20 3.3 1e+04 -1.9 0.2 18 32 332 345 330 350 0.75 12 20 0.12 3.7e+02 2.6 0.0 15 27 358 370 354 384 0.80 13 20 0.059 1.8e+02 3.6 3.9 17 43 405 428 396 429 0.84 14 20 0.14 4.3e+02 2.4 7.2 4 30 421 451 418 458 0.78 15 20 0.014 43 5.6 6.2 14 43 460 486 451 495 0.75 16 20 0.63 1.9e+03 0.3 4.5 18 44 493 516 484 516 0.85 17 20 1.5 4.4e+03 -0.8 0.6 18 28 523 533 520 545 0.83 18 20 4.3 1.3e+04 -2.3 0.5 22 43 557 575 552 576 0.62 19 20 4.8e-05 0.15 13.5 2.2 5 43 604 641 603 642 0.85 20 20 0.052 1.6e+02 3.8 0.5 12 40 656 686 648 700 0.89
Sequence Information
- Coding Sequence
- ATGTACTCAAGTCAGCTGGATTTCGTTTGCGACTACTGCTCCAGAACTTTCACGAGAAAATATAACTTACAGACTCATATAGAAAACTGTCATATAAACTCGTCCTGCCATTGTGACATTTGTGGCCAAAATTTCGGCAGTCCTGCCGGATTACTTCAACACTTATCCCGCGGACACAATAACTATGGCCAGCCCTTTCCGGAATGCGAACTTTGCGGCCGAATTTTCACACGAAAACAGAATATCACCTCTCATATGATAACTGTACATCTGCAGGGGTTAGGATACGAAATTCGCTGCCGTTTATGCGAAAAAACCTTCACTACGGAAAGGAACCTAAAAAGACACATAAATCAATTGCATAATCCTGATGTAGAGTACCCCACCTGTAACGATTGCCATAAGGTCTTTAAAGGGAAACATTCGCTTATAGCTCACATTCAATCAGTTCATAATGTGAGCGAAAaagacgcaatcaaatgccacTTGTGCGAAAAAGTGTACACTAACAATAGGAACCTGAAAAGGCATATAGAAATGTTTCACGGTGTAAAAGGAGAATTCAGATGCGATATCTGCCCTAAAGTGTATACTTCGAATCAAAGTTTACGCCGCCATGCCCGCACGAGGCATAGTACGGAAAATCAAGAACATTTAACTTGTAATTTCTGCATGAAAGTGATAATAGGTCGGGAGAATTTTGAAAGCCATGTGCAATTTCATCATCAGGACACCGAAATGGAGAACAAAAACGAAAACGTCTGCGAAACTTGCGGTGAAAGTTTCGAAGAAGAACCGTTGTTGCGACAGCATGTGAAATCAGAGCATTCTTTCAAAACCTTCTACAGGTACTGCAAGAAATCCTTGCTTAAACAATACGGGATGGACTCGCAAAACATATATAACTGTGAATACTGTGATAACTACTTTTTAACGGTCTACGAGTTGAAGGATCATATGCGAGTGACACATGATATAGAGTACGCCCTATCAACCTGCAATGTTTGCTTCAACAagtttttcagtcatgaaaCGAGACGCGCACATAGAAACATCTGTTTACCGCCGCCAAACGTCAACACTTGCAGTTACTGTGATAAGTTGTTCACTGATATTTCCAGTTTAGAATTCCATACAAGGATCTTCCATCCACAATCTCAAATCGCAGACTCCAATATTTCATCAACGAATATTGACGAAGAAGGTCTCGCGTTTAAGTGTGAGCATTGCGAACGCATATATTACAGCGAGAGGTCGCTCAAACATCATGTCAAGCTAAAACATACGACAGATGAGGAGGTAGAATGCCAACTTTGCGGAAAAATCTGCAGCAACAAATACTACTTAGCGTCACACACAAAAATAGTCCATAACAACGACTCTTGGTCTCGCTGCGAATATTGTGATAAACAGTTTAAATCTAAAAGAAATATCCGAAGACATATTGAGTACACCCACTTAGGCATGCAAAGGCACAAATGTATTGAATGCGAAACCTTGTTTAAGGAAAAACGGAGCTTAAGAAAGCATGTGCGGACGAAACATCCCAATTCTGCCGCTTTTCCGCAGTGCCATATATGCCAGAAACGTTTTGAATCCGCCAAATCTTGTAAGATACATCTGAAGCTGTTGCATTCTTTCAATATGAACACGTATCCTTGTCACTTGTGTTCTGTATCATTCAGTTCGAACGAGGCTCTAAACATACATCTCGAAACTAAACACCTAGCCGAGGATGAGATCTACAAATGCGAAGAATGCAACTTGGTCTTCAAAGGGCAAGAAAAGTTCGATGCTCACAATGAAATTTGCCACGTCAATCTAGTCCCTACGATCAAGCAGAAAGTTCTACCAAGATGTATACTCTGCATGAAAGATTTTAGCACGCGAAAAACGCTGAAACGCCACATCAAAAAGTTCCATGAAGAATTTGACGTAGACGAGTTAGCAACTTTCGGTTCACGTCGCAGAAGTTTTACAGTAGAATGCGAAGACTGTATCAAGAATTTCAACGGCGATTTGCATTTGAACGTCTATAACAAGCTCAAACATTTAAGGGACTCTGAGATATTTAAGTGTCAAACTTGTTTGGAATCTTACAATACCCTGGAGTACGCTATACAAAGGTATAAGCTTACGAATGCAGATGCTTGCAAATCCAAGATGATTCTGAGCGAATTGTGCACTACAGAGATGAGTGAAGAAGAGACTGATTTCTCTCATTTCGGGGCATTACATGACATGTTGCCTGAGAGTACGACCAGTGAGTTTATCATAAAGTCAGAACCTCTTGAAGACTCAATAAAGTCAGAGGAGGAAGGTCTAGAAGACTCAATTAAATCAGAAGATGAGTCTGAGGTCAAGATGGAATCGGCTTGGCCGTAA
- Protein Sequence
- MYSSQLDFVCDYCSRTFTRKYNLQTHIENCHINSSCHCDICGQNFGSPAGLLQHLSRGHNNYGQPFPECELCGRIFTRKQNITSHMITVHLQGLGYEIRCRLCEKTFTTERNLKRHINQLHNPDVEYPTCNDCHKVFKGKHSLIAHIQSVHNVSEKDAIKCHLCEKVYTNNRNLKRHIEMFHGVKGEFRCDICPKVYTSNQSLRRHARTRHSTENQEHLTCNFCMKVIIGRENFESHVQFHHQDTEMENKNENVCETCGESFEEEPLLRQHVKSEHSFKTFYRYCKKSLLKQYGMDSQNIYNCEYCDNYFLTVYELKDHMRVTHDIEYALSTCNVCFNKFFSHETRRAHRNICLPPPNVNTCSYCDKLFTDISSLEFHTRIFHPQSQIADSNISSTNIDEEGLAFKCEHCERIYYSERSLKHHVKLKHTTDEEVECQLCGKICSNKYYLASHTKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRHKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICQKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALNIHLETKHLAEDEIYKCEECNLVFKGQEKFDAHNEICHVNLVPTIKQKVLPRCILCMKDFSTRKTLKRHIKKFHEEFDVDELATFGSRRRSFTVECEDCIKNFNGDLHLNVYNKLKHLRDSEIFKCQTCLESYNTLEYAIQRYKLTNADACKSKMILSELCTTEMSEEETDFSHFGALHDMLPESTTSEFIIKSEPLEDSIKSEEEGLEDSIKSEDESEVKMESAWP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00447464;
- 90% Identity
- iTF_01535147;
- 80% Identity
- iTF_00446423;