Ddah020639.1
Basic Information
- Insect
- Diarsia dahlii
- Gene Symbol
- -
- Assembly
- GCA_949775195.1
- Location
- OX459200.1:18934725-18935159[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-12 2.4e-09 38.1 0.0 1 40 22 62 22 66 0.88 2 2 3.6 3.1e+03 -0.6 0.1 33 44 129 140 129 141 0.86
Sequence Information
- Coding Sequence
- ATGATTAAAACTGATTCTTTGCTCACAGATGGAGATAATTCGtcttcaaagaaaataaaatggacAGAGGAAGATATGAACGGGGCAATAGAGGCAGTAATTTATGGAAACATGACACAGTGCGCCGCAGCAGAACTATTTAGCATTCCCAGACCAACACTAGCTGATCACCTGAACAAGGGAAACATTGGGAAAAGAGTGGGTCGACATTCTATAATGAACGAAGGTCATGAAAAGTTCCTCGTCAGCAAACTAATAGAGCTAGCTAACAGTGGAAAGCCAGTCACTCCACATGTAATCTGCAAGGAAGCATACCTGTTTTGCGAGCAGTTTCAGTTAAAGCATAATTTTAATAACGAAACTAGGATCGCCGGGAAGAAATGGCTTAAGAGGTTCTTGAAACGACACCCTGAGGTTATGCATTGCTTTACTtga
- Protein Sequence
- MIKTDSLLTDGDNSSSKKIKWTEEDMNGAIEAVIYGNMTQCAAAELFSIPRPTLADHLNKGNIGKRVGRHSIMNEGHEKFLVSKLIELANSGKPVTPHVICKEAYLFCEQFQLKHNFNNETRIAGKKWLKRFLKRHPEVMHCFT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00447045;
- 90% Identity
- iTF_00447045;
- 80% Identity
- -