Dbru011259.1
Basic Information
- Insect
- Diarsia brunnea
- Gene Symbol
- -
- Assembly
- GCA_949774965.1
- Location
- OX459004.1:3971770-3973608[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-07 0.00014 22.5 0.0 3 40 17 54 15 59 0.86
Sequence Information
- Coding Sequence
- ATGGTGAAAGTACGTCCAAGAAAGACAACCAAAGCCAACTGGACTATGGACCAGCTGACGAAGGCTATCAAGCTAATCGATGAAGAGGGATATACAATGAGGAAAGCTGCACTTGCAATGAACATTCCATTTTCAAGTTTACACAAgagatacaaaaaaacaaataagaagCCTCGCCTCGGACGAACTACTGTTTTCACGCCTGAGATTGAACAAGAATTTGCGTCCActgtcaaaaatatgtcaaatcttttttATGGATGCACCGCAACGCAAGTACGAAAAGCGGCATTCGATTATGCGGAATCCCTTAACTTGAAGCATAATTTTAATAAGCAATCCAAAATGGCTGGTCGTGTTTGGTTCGAAGGATTTACTAGCAGGAATAACATATCCATACGAAAGCCTGAGGCAACGAGCATTCACAGGATCACAGCTTTTAATAAAACGGAGGTTCACCGGTTCTATCAACTGCTGGAAGAAATTATGGCTAGATTTAAATTTCAACCTAAAAACATTTATAACTGTGATGAAACAGGAATTTCAACTGTCCAAGAGCCAGGCAAAGTGTTGGCCACCAAAGGGCAGAAGAGGGTGGGCTCAATCACAAGTTGGGAAAGGGGGAAAAATGTAACTCTTCTTTGTGCAATGAGCGCTGCTGGTGGATACGTTCCACCAATGTTTATTTTCCCACGGAAAAGAATGACACCAACTCTCGAAAAAGGTGGCCTAGCCGGAGCAATTTATAGATGTTCAGATAGTGGGTGGATTAATGAGGATCTTTTTCTGGGGTGGCTTGAGCACTTCAACAATCATGCAAAACCTTCTGAAAATGAGccagttttgttgattttagaCAACCACGCAAGCCATATTTCACTAGCCATCCACGAATACTGCAAAACTAATCATATTCACATGCTTTCTTTGCCACCGCACACCTCTCATCGCATGCAACCACtagatgtttctttttttggaccATTTAAGGCAGCTTACAAAAGAGAATGTGATTTCTTTATGAAGAGTCATTTAGCTGAAAGAATAACACCATATGATTTAGCGTCGTTGGTTAAAAAAGCATTCTCCGATGTCGCCACTATAAGCAAAGGCGAAGCAGGATTCAAAGCTACGGGTATTTTTCCACTGAACCCAAACGTCTTTACAGGTGAAGATTTTGTAGCTGCTGAAGTCCTGCAATCTGAGCCTAACATAGTTGAAGATGTTGATCCTACAGCAGTACAACCATCTGCTGCTGACTTTGAACAACATAGTCCTCCTATTCCTAGTACATCGAGGGACTTTAATCAATTTACACCTGAACATACTACAGTGTCAACGTCTACACCTGAGCTGCCATTACCTATCACGACAAAAATACAAGATTTCATCCAGATGCCCAAAAAAACTCTTTTCCTTAAAACCAGACaaggaaaaaagaaacaacatgCAACCCTTCTCACTTCAACACCAATTAAAGATACTTtgattgaaaaagaaaacaagaagaAAGCTAAGAATGAAAAAGTGAAGGGAAAAGGTATAGGAAAGAAAAGCAAGCCTACGGCTGTCCTGAAGGCTACTGCTGCTGCTAAAGTAAAGAAAAGAATTCTACGGGAATCTAATGAGTCATCATCGTCGTCTGAAGTCAAAACAGATGATTTATGTCAAGATGATATAAACGACGATGTAGAAGACACTGGAAACCAGTGTCTCATATGTGGTGAATTCGGAAAAGATAAAGAAATGTGGTATCGTTGTACTTCTTGTGGGCTTTGGGCACATTCAGAGTGCACTGGGTGGGAATCTGCCCGTAATTATGTATGTGACAATTGTTGA
- Protein Sequence
- MVKVRPRKTTKANWTMDQLTKAIKLIDEEGYTMRKAALAMNIPFSSLHKRYKKTNKKPRLGRTTVFTPEIEQEFASTVKNMSNLFYGCTATQVRKAAFDYAESLNLKHNFNKQSKMAGRVWFEGFTSRNNISIRKPEATSIHRITAFNKTEVHRFYQLLEEIMARFKFQPKNIYNCDETGISTVQEPGKVLATKGQKRVGSITSWERGKNVTLLCAMSAAGGYVPPMFIFPRKRMTPTLEKGGLAGAIYRCSDSGWINEDLFLGWLEHFNNHAKPSENEPVLLILDNHASHISLAIHEYCKTNHIHMLSLPPHTSHRMQPLDVSFFGPFKAAYKRECDFFMKSHLAERITPYDLASLVKKAFSDVATISKGEAGFKATGIFPLNPNVFTGEDFVAAEVLQSEPNIVEDVDPTAVQPSAADFEQHSPPIPSTSRDFNQFTPEHTTVSTSTPELPLPITTKIQDFIQMPKKTLFLKTRQGKKKQHATLLTSTPIKDTLIEKENKKKAKNEKVKGKGIGKKSKPTAVLKATAAAKVKKRILRESNESSSSSEVKTDDLCQDDINDDVEDTGNQCLICGEFGKDKEMWYRCTSCGLWAHSECTGWESARNYVCDNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00302053;
- 90% Identity
- iTF_00302053;
- 80% Identity
- -