Dbru015391.1
Basic Information
- Insect
- Diarsia brunnea
- Gene Symbol
- -
- Assembly
- GCA_949774965.1
- Location
- OX459007.1:6910947-6912473[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-08 2.4e-05 24.9 0.0 2 34 19 51 18 58 0.90
Sequence Information
- Coding Sequence
- ATGCCAAAAACATACATGAAGCGTTTAGGCGCTCGCGCCTATCGGAATTATAATGAAGACGTGTTAGAACGAGCAGTAGCTGCAGTTGTAGAAGGTCGTATGACCTTACGTGGGGCTTCAGAGAAATTTAAAATACCGTATGATACAATTTTCAATAAATACCAcggaaaatttataaaaaagccGGGTGCTCAGCCAGTATTTTCTGAAAATGAAGAGAAATCTATATTGAAAGCTTGTGTCAAGTGTTCTGAATGGGGATATCCCCTTACAATCTTAGATTTGCGCATGTTTGCTAAAATTCTTTTAGACAGACAAGGCAGAACAGTttcgaaatttaaaaacaacCTGCCTGGACAAGACTGGGCATACTCGCTACTGAAGCGACACAAAAACGAATATTCTAAACGGGTTGCTACTAATATCAAACGAGCTCGAGCTGCAGTATCCCCTGAAAGTATCGAGGAATATTTCAACAACCTTGAAAAAACTGTGGAAGGTGTGCCTGTCTCGAATATTTTCAATTACGACGAGTCGAACTTAAGTGATGATCCAGGGAAGAAGATAGGGATATATCGTAGAGGTGTCAAATACCCGGATAAGGCGATGAATTTTTCTAAGAGTGCAACATCGATAATGATTTGTGGGTCTGCTGATGGGGTGCTTTTACCACCCTATATCATTTATAAAAGTCTACACCTTTATGACACGTGGAAAGAGAGAGCTCCATGCGGTCCACCAAATTGTAATAAGCCTTGTTGCTCAACAGGATCACGATTTAACCGTACAGTCAGTGGTTGGATGGACGCCCCAACATTCAGAGATTGGTTTGTAAGTAGTTTTTTGCATCATGCAAAAAGATTGCCTGGACGTAAAGTTCTTATTGGTGATAATCTTTCTTCTCATTTAGATGAAGAGGTCATAAAACTTTGTGGTGAAAATAACATTGATTTTGTATGTTTACCACATTCGACGCACTTATGCCAACCTCTGGATGTGGCGTTCTTCCGTCCAATGAAAACAGCCTGGCGCCAAGTGCTGACAAATTGGAAAATGCAAAATGCTAAATTGGCAACTGTTCCTAAGGATACATTCCCGTATGTTCTGACAAAAGCTCTCGAAAAAATGGATCAAGCTAAACCAAAACCGAATTCTCCTTATATAGACATAAGTTCCGGGATCAAACGTAATATCGTAAGCGGATTTTGTGCAACTGGCATTTATCCTTTCAACAAACAAAAGGTTCTTAATCGCCTTCCAAGAGAACACATTGAAGAACACGAAGTTGAAAGCACTTTGACAGATTTCTTGAAGGAATCAAGATATGGAAGCACTTCAAACCAACCTGCAAGAAGAAAGAGACGTTTGGATGTAGCTCCTGGAAAAAGTATTGCAACGAGAGAGGAAGCGTCCCAATCTGAAAATCAGCAAAGTAATGAACAGAACGCCTCAGATTCCGATCATCAAGAAATGGAAATTCAAGCATTGGTTGAATCGGGTCCATCTCAAGTCACAGCTGCAGACTGA
- Protein Sequence
- MPKTYMKRLGARAYRNYNEDVLERAVAAVVEGRMTLRGASEKFKIPYDTIFNKYHGKFIKKPGAQPVFSENEEKSILKACVKCSEWGYPLTILDLRMFAKILLDRQGRTVSKFKNNLPGQDWAYSLLKRHKNEYSKRVATNIKRARAAVSPESIEEYFNNLEKTVEGVPVSNIFNYDESNLSDDPGKKIGIYRRGVKYPDKAMNFSKSATSIMICGSADGVLLPPYIIYKSLHLYDTWKERAPCGPPNCNKPCCSTGSRFNRTVSGWMDAPTFRDWFVSSFLHHAKRLPGRKVLIGDNLSSHLDEEVIKLCGENNIDFVCLPHSTHLCQPLDVAFFRPMKTAWRQVLTNWKMQNAKLATVPKDTFPYVLTKALEKMDQAKPKPNSPYIDISSGIKRNIVSGFCATGIYPFNKQKVLNRLPREHIEEHEVESTLTDFLKESRYGSTSNQPARRKRRLDVAPGKSIATREEASQSENQQSNEQNASDSDHQEMEIQALVESGPSQVTAAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00043424; iTF_00651682; iTF_00651683; iTF_00036625; iTF_01525938; iTF_00172853; iTF_00072726; iTF_00072725; iTF_00122329; iTF_00172842; iTF_00622773; iTF_00238809; iTF_00238810; iTF_01166617; iTF_00036630; iTF_01166618; iTF_00238816; iTF_00238817;
- 90% Identity
- iTF_00122329;
- 80% Identity
- -