Dabb022818.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Diaprepes abbreviatus
Gene Symbol
Hr39
Assembly
GCA_034092305.1
Location
JASJET010000084.1:3612560-3631824[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.32 6.3e+03 -2.1 3.4 46 84 219 258 124 315 0.52
2 4 1e-08 0.0002 22.6 0.0 1 29 414 442 414 476 0.80
3 4 0.056 1.1e+03 0.4 0.0 78 114 465 503 436 527 0.63
4 4 7.1e-73 1.4e-68 233.9 0.1 205 408 546 744 530 744 0.97

Sequence Information

Coding Sequence
ATGTCAGCCGAAATGCGTTCGCCGAACGTGTCCGTCACGCCCATTAACATGGAGTACCCGCCCCCTGGTCAATTAACGAACGGGATGGCAGAAATTGGGGGAGCTAGCACTGTGATCAGTACCATAGGGGGTGTGGTCAAATCCGTGGGCGTAACCGAACCGCCCAGGACGAGAAGTGCGCCACACCCCGCTGTGGTTATGAGCAATGGTGTGGCCGATGTGGACGGGCTCGACCCGGAATTAGCTAGAATAGATTTTCAATCTGTAAATATGAGGAGCAAAAAGAACAAACAGGAGGAACTGCCGCGACCGATGAGCTGGGAGGGTGAACTGAGTGATGGAGAACGGGACGGAATGTGCATAGACGAAAGTAGCGAACCGCCCCATCTTCCAGAAAACCTGTCAGTATCGGCTTCGAAGCACAACTCAACGCTAGACCTTAAAGATAGCCCCGTTTTGAGGCTTAAACAGCCCCCCGTCGGTAGTTATTCGTTGCATAGTACGCCGTCAAATTCACCTTTATTAAATCAACGACATCCAGGAACTGGAGTGCCAATTATTAGCCATAAGGATCTCATGCACAAAGCACTTAACGTACCTCCGACGCCGAGTCCCGATTCGGCCATTCATTCGGCCTACTCCGTCTTCAGCTCGCCGAATCAGAGCCCGTTGACGCAGCGACATATTACGTTGACTCCGAATTTGAGTAGAAATAACTCGGACGCGTCGCATTCGAGTTGCTGCAGTTACTCGAGTGTATCTGTGTCCGTGTCGCCGACTCAGCAGTTCTCACCGACACACAGTCCCATTCagGGCCGTCACATACATAATTCCTTACACGGCAGCCCCCTACATCACGGGGTCCTCTACAGAAGTCTTCCCGAAGATACGCCTTCCGTCCAAACGCAGTACGAACAAAAATACGACCATGATCCTGGTGGTGGAGAAGAGACTGACGATAAGACTGGGTTACTCCATGCGGCGTTACCTGCACAACCTGGAATTTCAAGgCAGCAGCTTATAAATAGTCCATGTCCAATCTGTGGTGATAAAATTTCTGGATTCCATTATGGTATTTTTAGTTGTGAATCGTGTAAAGGCTTTTTTAAAAGAACCGTTCAAAATAGaaaaaattatgtATGTTTGAGAGGTGCTCAGTGTCCTGTTACAGTGGCTACTCGAAAGAAATGTCCAGCTTGTCGGTTTGACAAGTGTCTTCAGTGTGGGATGAAATTGGAAGcaATAAGAGAAGACCGAACAAGAGGTGGAAGATCAACCTATCAATGCTCGTATTCCCTGCCTCCTTCCCTGGCAACTCAGGCTGAATTAAGATCTAGTTCAACAGATTTAAGGCAAGGTTTAGGTGAGCACCATCCAGGATTCACAATAAAACTGGAACCGCCTGATAACGTTTTGTCACAGCACTATAAAAGGGGAACCTTGCCTGGTTCTAAAGGTGTCCCGCCATTATTGCAAGAAATAATGGACGTGGAGCACCTATGGCATTACAACGAAATGGAACTGAACAAGCTTAGTATCGACGGCAACCTTGGGAAAGAAGGAGCGAGCGGTGCGGTACATAATCTGTCGAATCACCCGCTGTTGGCGGGGACCGCTTTGGCTGGATCTACCGACACTAATCCAGACTTCGTGGCTAATTTGTGCAATATCGCCGATCATAGGTTATATAAGATCGTCAAGTGGTGCAAAAGTCTTccattatttaagaatatttctATCGATGATCAAATATGCCTTCTCATCAACTCCTGGTGTGAGCTGCTCCTATTTTCTTGTTGTTTTCGATCAATGTCAACCCCCGGGGAAATCCGAGTGTCCTTAGGGAAAAGTATAACTTTAGCTCAAGCTAGGGAGATGGGGATGGCAGCGTGCATAGAGAGGATGCTCAATTTTACTGAGCATCTGAGAAGATTGAAAGTCGACCAGTATGAGTATGTTTCTATGAAAGTTATTGTCCTCTTAACTTCAGATACATCAGAACTGAGAGAAGCGGAAAAAGTGCGGGCATCTCAAGAGAAAGCCTTGAAAGCACTTCAGGACTACACGTTATCGCATTATCCTGAAAGCCCGGCTAAGTTTGGAGAATTGCTTTTGCGAATACCCGAGTTACAGAGGACATGCCAGGTGGGCAAAGAAATGTTAACAATAAAGTCAAAAGACGGAGAAGGTCCTAGTTTCAACCTGTTAATGGAGCTCCTCAGGGGCGACCATTAG
Protein Sequence
MSAEMRSPNVSVTPINMEYPPPGQLTNGMAEIGGASTVISTIGGVVKSVGVTEPPRTRSAPHPAVVMSNGVADVDGLDPELARIDFQSVNMRSKKNKQEELPRPMSWEGELSDGERDGMCIDESSEPPHLPENLSVSASKHNSTLDLKDSPVLRLKQPPVGSYSLHSTPSNSPLLNQRHPGTGVPIISHKDLMHKALNVPPTPSPDSAIHSAYSVFSSPNQSPLTQRHITLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHIHNSLHGSPLHHGVLYRSLPEDTPSVQTQYEQKYDHDPGGGEETDDKTGLLHAALPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAQCPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLATQAELRSSSTDLRQGLGEHHPGFTIKLEPPDNVLSQHYKRGTLPGSKGVPPLLQEIMDVEHLWHYNEMELNKLSIDGNLGKEGASGAVHNLSNHPLLAGTALAGSTDTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLAQAREMGMAACIERMLNFTEHLRRLKVDQYEYVSMKVIVLLTSDTSELREAEKVRASQEKALKALQDYTLSHYPESPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01240932;
90% Identity
iTF_00830497;
80% Identity
iTF_00444167;