Basic Information

Insect: Diaphorina citri
Gene Symbol: -
Assembly: GCA_000475195.1
Location: CP125323.1:1934553-1954160[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0025 0.22 13.5 1.1 1 23 70 92 70 92 0.98

2 14 6.1e-05 0.0054 18.5 0.3 1 23 109 132 109 132 0.97

3 14 0.05 4.4 9.4 0.4 1 23 202 228 202 228 0.97

4 14 0.002 0.17 13.8 0.8 1 23 413 435 413 435 0.97

5 14 0.52 46 6.2 0.3 2 23 453 474 452 474 0.93

6 14 0.21 19 7.4 0.1 1 23 482 505 482 505 0.90

7 14 5.1 4.4e+02 3.0 0.5 1 20 510 529 510 533 0.82

8 14 5.7 5e+02 2.9 1.3 1 23 540 572 540 572 0.84

9 14 4.4 3.9e+02 3.2 3.3 3 23 593 613 591 613 0.90

10 14 5.5e-05 0.0049 18.7 1.3 2 23 619 640 618 641 0.95

11 14 0.00089 0.078 14.9 0.2 1 23 745 767 745 767 0.98

12 14 0.61 54 5.9 1.0 2 23 775 796 774 796 0.96

13 14 1.8 1.6e+02 4.5 1.1 1 21 956 976 956 978 0.95

14 14 0.16 14 7.7 0.2 1 23 985 1007 985 1007 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0025	0.22	13.5	1.1	1	23	70	92	70	92	0.98
2	14	6.1e-05	0.0054	18.5	0.3	1	23	109	132	109	132	0.97
3	14	0.05	4.4	9.4	0.4	1	23	202	228	202	228	0.97
4	14	0.002	0.17	13.8	0.8	1	23	413	435	413	435	0.97
5	14	0.52	46	6.2	0.3	2	23	453	474	452	474	0.93
6	14	0.21	19	7.4	0.1	1	23	482	505	482	505	0.90
7	14	5.1	4.4e+02	3.0	0.5	1	20	510	529	510	533	0.82
8	14	5.7	5e+02	2.9	1.3	1	23	540	572	540	572	0.84
9	14	4.4	3.9e+02	3.2	3.3	3	23	593	613	591	613	0.90
10	14	5.5e-05	0.0049	18.7	1.3	2	23	619	640	618	641	0.95
11	14	0.00089	0.078	14.9	0.2	1	23	745	767	745	767	0.98
12	14	0.61	54	5.9	1.0	2	23	775	796	774	796	0.96
13	14	1.8	1.6e+02	4.5	1.1	1	21	956	976	956	978	0.95
14	14	0.16	14	7.7	0.2	1	23	985	1007	985	1007	0.94

Sequence Information

Coding Sequence: ATGCCGTTCATCAGTAGCACTGATTCCTCCGCCTTTGAAGGCAGTTTCCCACCTTCAGGACAAGAGATTGCCCTCTCTACGCAGCTCGTCCGCTCCGAAGACCGTTGGCTTTGTAAAGTTGTCTCCTTATCCCGGGAGATGTTTTCGGTCTCCAGAGCTTTCGATCACCTCAACATTCACAAAAAGACGCACGACCTGCGCAAGCCGCATCAATGTTCCCTATGTAACCGAGGCTACAACACAGTAGCGGCTCTCACCTCTCATCTGCAGAAACACAACAAGAACCCCCCGGACCCCCCCACGACGCCGCCCCTGGGGGCCAGCTTCAAGTGTTTGGACTGCGAGACCAAGTTCGGCACACCGGAGGACTTGCAGAATCACATGAAAGAGGAGCACAACGTCCACCCggccccctctccccctccgcCCCCACACGCCCCCTCCCATCCCTCTCTCATgtcccctctctctcgctccatATCCAAACTACACTCGTCCGTCTATCAATCTTCCCCGTCGCCGCTCTCGTTTCCCCTCCAGtTCCCTCTGGCTTCGTCGCCCTCTCGCTACTCAGGGTctccgggttcgatccccaacGCCCGGTACATGTGCAATTATTGTTCCAATGGGAGTGAAGGGTTCAGCTCGCTCGAATCTCTTCATGTTCATATTCAGACAGCCCATGGCTCCCTTCTCAACGGCGACCTGATTCGGGAAATCTCCAACCCTTCTCTGCGCAACGATCTGAATTCCAGTGACGCTCTGAAAGCTCACATTTCTTCTGCGCAGGCGCGAACCGATTTGAACGCTTTGCGCAGCGATCTGAGTTCAGCGGATGCTCTGAAAGCTATTTCTTCTGCGCAGAACGCTTTGCGCAGCGATTTGAGTTCGTTGTATGCCCGAAGTAACGCGACCGTGTCCGAACTCCTGTCGTATCAacagagggaggggaaatacgCGCAGTATTTGACGCATGCGCTGAACGGTGTGACCAATGGAGAGGCTGGGACGGAAGAGGGTGGAGTTAAAAATGAAGGATTCAGTCCTCCCGACCAGCAAACCAAGCCCACCGACCTCACAGTCAGCAAAAAACATAAACTGAAATCAGcccacaacaataacaacaacaatggtCCCACCTATGATCCTAATAAGCGAATCAAACTAAATGGAGCTAGCACGAATAGTAGTGAACTTAGTTCTGTGATaAAACACTACGAGAACGCTCACAAGCTGCACATCTGCTCCCAATGCGACGCGACCTTCCCCGACCTCGCCTCGTTCTCCCTCCACCAGAAAACCCACCTGGACAACGATCTCCACCGGCTGAACAACAACACGACTTCGCCCGAACTCCAGTGCAAACAGTGCTCGTCCGTCTTCGCCGACATTCGGCAGCTGTCGGAGCACTTCGTGAGCCATTGCCTCGCGATGCTGAAGTTGTTCCAGTGCGGAGCGTGCCAGTTGAGCTTCGGCAGCGGAGAAGAGCTGACGAAGCATCTGGGCGAGACGCATGTGTGTAAGGTGTACAAGTGTGGCCTGTGTAGTGAGATGTACGACAGTAAACTGCTGATACAGCTCCATTTTACCCAGTCTCACCACAAGGAGGTTAAACTGTACCGGTGTACCAAATGTCCTCCATCTCCATCGAGTGGAGACGACACTTCCAGTTTTTCATCCCACGCGGAGTTTGCGTCTCATGTGCGCAGCGCGCATCCACTCCAACCGTCCGATATTTGTACGCGCATTCTGCCTCagGCTCCGCCACTGCTTCAGTGCATCTTCTGTTTCCGTCAGTTCCACTCCGCGTCTGAACTTCAACTCCATCTGCACGAGCACACTGCCGGCCCCCTTCAGTGCCCCCTATGCCCTAAGACCTTCCGTGTACAGTTCCTACTGGAGACCCATCTGACAACGCACCATCCCGCACTGcTATCCGCCACTGATGCTCAAGGTCAAGGCGGCGATGCCAAACCTCCCGCCCTCTCTCCATCCACCCTCAAATCTCTACACATCTCTTCACCCACCAATCAGAACCCTCTATTTTCTTCATCGTCCAATCAGAATGCTCTATTCTCTTCATCGTCCAATCAGAATGCGTTATTTTGTGACCTGTGTGACCGGAAGGACTTTCTGAGTGAGCCAGAGCTGGCGGCCCATAGGAAACTGCACCTGAGTAAATCCACAGGAAAGGTCAGTCTATCCTGCGCATACTGGGTGGAGAGGGGGAAACACAAGTGTAATATATGTGACGAGATTTACCCCACGCCTACGGGACTGGCTGAACATAAGTTGACCCATTGTAAGGTTGTCCACGGAACCACCTGTACCAAGTGCAAAGCTTCCATCACTTCGGAGGAGACATTCCTCTCCCACCTACAACAGCACAGCACTTCCTCTAACTCGTCCTCTAGTGGGGGAAACATCATCCTGCCTACCTCGTGTATAATATGCTGCCAAACTCTAAACACAGAGGTGGAGACGAAGCTGCATTCGAATTTCCACTTGAAACCCAGTCCGAATTCGCTTCAGAATGCTGCGTTTAGTGGGAATCCGCCAAACAGtgttgccaacttCACCAGACCTCCGTCCAGTGGTGCCAACTTCACCTCGTCCCCCAACACCTTCTCCAACAGCGCAACGTTCACCACCAGTGTTGCCAGCTTGAAGGGAAATTTCTCGAGCGAGCGAAGTGAGAGGGGTTTTGGTGCTCACTCTCGCGAGGATaagaggagtgagaaagagCTGAGGAAGATGATGGAAAtgatgagaggaggaggaggaggaggagagaaggcgAAAGCGTTCCCTTGTCCTCAGTGTCCGGCGCATCTCATTGAGCATACGTTTGAAGGCCTCTCCTCGTACACCTGCTTCGTGTGTCTCACCCAGTTCACGGCCGTGGGAGGCCTCCAATCTCACATCCGTTGTCATGGGCCGTCCGCTAGGAGTTATGAGTGTGTAAGATGTCCGGCCCGGTTCTTTTTCAAGGCGGAACTGGAGAACCATAGCCTCGGACATAAGGAGGACGGAGGCCGCGCGAATTATGAAAAGATGTCCAACTACTTCCACTACCAGAAGTCCCTCCAACAGTACCAACAAATGAAggaacaacaccaacaacaaaactaCAAGAGCCAACAGCGAACTTCGTCCAAACCAACCAACTCGGAGTCACAAAAACCAACCAAAACGGAAAGCCAACAACACAGACCTAATTCGGAAAGCCAACAACATAGTCAGGAAAGAAATGGTGTAGACGAGCACACAGACAAACACAAGGAagtcaaaagaagaaaacacagTATGGATAGCAACGAAAACAAATATTGCAAAACAGTTGAAGAAATGGATGACAGAAATGACAAGTATGAAGCCTCAAGAAGCAGAAATGTGGACAACTATGCCAAAACCGTAGAAGGAATGGATGCAACAAGAGACAGGAATGAGAAGCATAGAGATAAATATGCAGAAGACATAGAATATAGAGACAAGCATGCCAAAATGGCAGGCGATATGGATTTAACAAACAGAAATACAGACAAATATAGAGAATATTCCAAAACGGCAAACGACATGGATTCACCACGCACAAGAGACAGGGACTTCGccaacaatgaaaaagagtttgaaaattCTCCAAATGACGAAGAAATCAATAGAGAAGgcagagaagaagatgaacaaagAAACGAGTTCGGCAAAAGAGAAGCGATGGATAGTGAAGATGAAAGACACGAACAAAGCCGAAGTGAAATCGGAGACAACCGAAGTGAGATCGGAGATAATCGAAGTGAAATGGATGATGTAGACATGAATGGAGATGAAGATTTTGATGCCAAAGTGAAAAGAGAATTAAAAAGTATAAATGAAGACGATGAAAATATGGAAGGAGGATTTGATGAAGATGGAGGTGAGAGAATGGATAAAGTTGGAGATAGatgtaataacaataacaatggaGATGTGAAAGTGGAGATTAAGCATGAaatggaagatgaagaagatatCGATGTAGGAAACAATCATTGTTAA
Protein Sequence: MPFISSTDSSAFEGSFPPSGQEIALSTQLVRSEDRWLCKVVSLSREMFSVSRAFDHLNIHKKTHDLRKPHQCSLCNRGYNTVAALTSHLQKHNKNPPDPPTTPPLGASFKCLDCETKFGTPEDLQNHMKEEHNVHPAPSPPPPPHAPSHPSLMSPLSRSISKLHSSVYQSSPSPLSFPLQFPLASSPSRYSGSPGSIPNARYMCNYCSNGSEGFSSLESLHVHIQTAHGSLLNGDLIREISNPSLRNDLNSSDALKAHISSAQARTDLNALRSDLSSADALKAISSAQNALRSDLSSLYARSNATVSELLSYQQREGKYAQYLTHALNGVTNGEAGTEEGGVKNEGFSPPDQQTKPTDLTVSKKHKLKSAHNNNNNNGPTYDPNKRIKLNGASTNSSELSSVIKHYENAHKLHICSQCDATFPDLASFSLHQKTHLDNDLHRLNNNTTSPELQCKQCSSVFADIRQLSEHFVSHCLAMLKLFQCGACQLSFGSGEELTKHLGETHVCKVYKCGLCSEMYDSKLLIQLHFTQSHHKEVKLYRCTKCPPSPSSGDDTSSFSSHAEFASHVRSAHPLQPSDICTRILPQAPPLLQCIFCFRQFHSASELQLHLHEHTAGPLQCPLCPKTFRVQFLLETHLTTHHPALLSATDAQGQGGDAKPPALSPSTLKSLHISSPTNQNPLFSSSSNQNALFSSSSNQNALFCDLCDRKDFLSEPELAAHRKLHLSKSTGKVSLSCAYWVERGKHKCNICDEIYPTPTGLAEHKLTHCKVVHGTTCTKCKASITSEETFLSHLQQHSTSSNSSSSGGNIILPTSCIICCQTLNTEVETKLHSNFHLKPSPNSLQNAAFSGNPPNSVANFTRPPSSGANFTSSPNTFSNSATFTTSVASLKGNFSSERSERGFGAHSREDKRSEKELRKMMEMMRGGGGGGEKAKAFPCPQCPAHLIEHTFEGLSSYTCFVCLTQFTAVGGLQSHIRCHGPSARSYECVRCPARFFFKAELENHSLGHKEDGGRANYEKMSNYFHYQKSLQQYQQMKEQHQQQNYKSQQRTSSKPTNSESQKPTKTESQQHRPNSESQQHSQERNGVDEHTDKHKEVKRRKHSMDSNENKYCKTVEEMDDRNDKYEASRSRNVDNYAKTVEGMDATRDRNEKHRDKYAEDIEYRDKHAKMAGDMDLTNRNTDKYREYSKTANDMDSPRTRDRDFANNEKEFENSPNDEEINREGREEDEQRNEFGKREAMDSEDERHEQSRSEIGDNRSEIGDNRSEMDDVDMNGDEDFDAKVKRELKSINEDDENMEGGFDEDGGERMDKVGDRCNNNNNGDVKVEIKHEMEDEEDIDVGNNHC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00443297;
90% Identity: iTF_00443297;
80% Identity: -