Basic Information

Insect: Diaphorina citri
Gene Symbol: L
Assembly: GCA_000475195.1
Location: CP125323.1:2831147-2850706[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.3e-05 0.0055 18.5 0.3 1 23 72 95 72 95 0.97

2 15 0.051 4.5 9.3 0.4 1 23 166 192 166 192 0.97

3 15 0.002 0.18 13.7 0.8 1 23 377 399 377 399 0.97

4 15 0.53 47 6.1 0.3 2 23 417 438 416 438 0.93

5 15 0.22 19 7.3 0.1 1 23 446 469 446 469 0.90

6 15 5.2 4.6e+02 3.0 0.5 1 20 474 493 474 497 0.82

7 15 5.9 5.2e+02 2.8 1.3 1 23 504 536 504 536 0.84

8 15 4.5 4e+02 3.2 3.3 3 23 557 577 555 577 0.90

9 15 5.7e-05 0.005 18.6 1.3 2 23 583 604 582 605 0.95

10 15 6.1e-05 0.0053 18.5 0.1 2 23 699 720 698 720 0.97

11 15 0.00091 0.08 14.8 0.2 1 23 742 764 742 764 0.98

12 15 0.63 56 5.9 1.0 2 23 772 793 771 793 0.96

13 15 0.96 85 5.3 0.0 1 19 933 951 933 953 0.86

14 15 1.8 1.6e+02 4.4 1.1 1 21 991 1011 991 1013 0.95

15 15 0.17 15 7.7 0.2 1 23 1020 1042 1020 1042 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.3e-05	0.0055	18.5	0.3	1	23	72	95	72	95	0.97
2	15	0.051	4.5	9.3	0.4	1	23	166	192	166	192	0.97
3	15	0.002	0.18	13.7	0.8	1	23	377	399	377	399	0.97
4	15	0.53	47	6.1	0.3	2	23	417	438	416	438	0.93
5	15	0.22	19	7.3	0.1	1	23	446	469	446	469	0.90
6	15	5.2	4.6e+02	3.0	0.5	1	20	474	493	474	497	0.82
7	15	5.9	5.2e+02	2.8	1.3	1	23	504	536	504	536	0.84
8	15	4.5	4e+02	3.2	3.3	3	23	557	577	555	577	0.90
9	15	5.7e-05	0.005	18.6	1.3	2	23	583	604	582	605	0.95
10	15	6.1e-05	0.0053	18.5	0.1	2	23	699	720	698	720	0.97
11	15	0.00091	0.08	14.8	0.2	1	23	742	764	742	764	0.98
12	15	0.63	56	5.9	1.0	2	23	772	793	771	793	0.96
13	15	0.96	85	5.3	0.0	1	19	933	951	933	953	0.86
14	15	1.8	1.6e+02	4.4	1.1	1	21	991	1011	991	1013	0.95
15	15	0.17	15	7.7	0.2	1	23	1020	1042	1020	1042	0.94

Sequence Information

Coding Sequence: ATGCCGTTCATCAGTAGCACTGATTCCTCCGCCTTTGAAGGCAGTTTCCCACCTTCAGGACAAGAGATTGCCCTCTCTACGCAGCTCGTCCGCTCCGAAGACCGTTGGCTTTGTAAAGTTGTCTCCTTATCCCGGGAGATGTTTTCGGTCTCCAGAGCTTTAAACACAACAAGAACCCCCGGACCCCCCACGACGCCGCCCCTGGGGGCCAGCTTCAAGTGTTTGGACTGCGAGACCAAGTTCGGCACACCGGAGGACTTGCAGAATCACATGAAAGAGGAGCACAACGTCCACCCggcccccctctccccctccgcCCCCCACACGCCCCCCTCCCATCCCTCTCTCATgtcccctctctctcgctccatATCCAAACTACACTCGTCCGTCTATCAATCTTCCCCGTCGCCGCTCTCGTTTCCCCTCCAGtTCCCTCTGGCTTCGTCGCCCTCTCGCTACTCAGGGTctccgggttcgatccccaacGCCCGGTACATGTGCAATTATTGTTCCAATGGGAGTGAAGGGTTCAGCTCGCTCGAATCTCTTCATGTTCATATTCAGACAGCCCATGGCTCCCTTCTCAACGGCGACCTGATTCGGGAAATCTCCAACCCTTCTCTGCGCAACGATCTGAATTCCAGTGACGCTCTGAAAGCTCACATTTCTTCTGCGCAGGCGCGAACCGATTTGAACGCTTTGCGCAGCGATCTGAGTTCAGCGGATGCTCTGAAAGCTATTTCTTCTGCGCAGAACGCTTTGCGCAGCGATTTGAGTTCGTTGTATGCCCGAAGTAACGCGACCGTGTCCGAACTCCTGTCGTATCAacagagggaggggaaatacgCGCAGTATTTGACGCATGCGCTGAACGGTGTGACCAATGGAGAGGCTGGGACGGAAGAGGGTGGAGTTAAAAATGAAGGATTCAGTCCTCCCGACCAGCAAACCAAGCCCACCGACCTCACAGTCAGCAAAAAACATAAACTGAAATCAGcccacaacaataacaacaacaatggtCCCACCTATGATCCTAATAAGCGAATCAAACTAAATGGAGCTAGCACGAATAGTAGTGAACTTAGTTCTGTGATaAAACACTACGAGAACGCTCACAAGCTGCACATCTGCTCCCAATGCGACGCGACCTTCCCCGACCTCGCCTCGTTCTCCCTCCACCAGAAAACCCACCTGGACAACGATCTCCACCGGCTGAACAACAACACGACTTCGCCCGAACTCCAGTGCAAACAGTGCTCGTCCGTCTTCGCCGACATTCGGCAGCTGTCGGAGCACTTCGTGAGCCATTGCCTCGCGATGCTGAAGTTGTTCCAGTGCGGAGCGTGCCAGTTGAGCTTCGGCAGCGGAGAAGAGCTGACGAAGCATCTGGGCGAGACGCATGTGTGTAAGGTGTACAAGTGTGGCCTGTGTAGTGAGATGTACGACAGTAAACTGCTGATACAGCTCCATTTTACCCAGTCTCACCACAAGGAGGTTAAACTGTACCGGTGTACCAAATGTCCTCCATCTCCATCGAGTGGAGACGACACTTCCAGTTTTTCATCCCACGCGGAGTTTGCGTCTCATGTGCGCAGCGCGCATCCACTCCAACCGTCCGATATTTGTACGCGCATTCTGCCTCagGCTCCGCCACTGCTTCAGTGCATCTTCTGTTTCCGTCAGTTCCACTCCGCGTCTGAACTTCAACTCCATCTGCACGAGCACACTGCCGGCCCCCTTCAGTGCCCCCTATGCCCTAAGACCTTCCGTGTACAGTTCCTACTGGAGACCCATCTGACAACGCACCATCCCGCACTGcTATCCGCCACTGATGCTCAAGGTCAAGGCGGCGATGCCAAACCTCCCGCCCTCTCTCCATCCACCCTCAAATCTCTACACATCTCTTCACCCACCAATCAGAACCCTCTATTTTCTTCATCGTCCAATCAGAATGCTCTATTCTCTTCATCGTCCAATCAGAATGCGTTATTTTGTGACCTGTGTGACCGGAAGGACTTTCTGAGTGAGCCAGAGCTGGCGGCCCATAGGAAACTGCACCTGAGTAAATCCACAGGAAAGGTCAGTCTATCCTGCGCATACTGTGCAGAAAATTTCAAGTCACGCGCAGAGCTAGAGGCGCACATGCGCACCCACTCAGTTGGCGGCACGGCCATTAGTACTACCAATGTAGTAGTGCCCAGGGTGGAGAGGGGGAAACACAAGTGTAATATATGTGACGAGATTTACCCCACGCCTACGGGACTGGCTGAACATAAGTTGACCCATTGTAAGGTTGTCCACGGAACCACCTGTACCAAGTGCAAAGCTTCCATCACTTCGGAGGAGACATTCCTCTCCCACCTACAACAGCACAGCACTTCCTCTAACTCGTCCTCTAGTGGGGGAAACATCATCCTGCCTACCTCGTGTATAATATGCTGCCAAACTCTAAACACAGAGGTGGAGACGAAGCTGCATTCGAATTTCCACTTGAAACCCAGTCCGAATTCGCTTCAGAATGCTGCGTTTAGTGGGAATCCGCCAAACAGtgttgccaacttCACCAGACCTCCGTCCAGTGGTGCCAACTTCACCTCGTCCCCCAACACCTTCTCCAACAGCGCAACGTTCACCACCAGTGTTGCCAGCTTGAAGGGAAATTTCTCGAGCGAGCGAAGTGAGAGGGGTTTTGGTGCTCACTCTCGCGAGGATaagaggagtgagaaagagCTGAGGAAGATGATGGAAAtgatgagaggaggaggaggaggaggagagaaggcgAAAGCGTTCCCTTGTCCTCAGTGTCCGCTCAGTTTCGACATGGAGGAGGAAGCACAGACACACgcacagtgttgccacttggtcaCGGTACATGAGTGTAGGCTGTGTTGTCAGATCTACCCGGACGGGGGGGCGCTTCAGGCGCATCTCATTGAGCATACGTTTGAAGGCCTCTCCTCGTACACCTGCTTCGTGTGTCTCACCCAGTTCACGGCCGTGGGAGGCCTCCAATCTCACATCCGTTGTCATGGGCCGTCCGCTAGGAGTTATGAGTGTGTAAGATGTCCGGCCCGGTTCTTTTTCAAGGCGGAACTGGAGAACCATAGCCTCGGACATAAGGAGGACGGAGGCCGCGCGAATTATGAAAAGATGTCCAACTACTTCCACTACCAGAAGTCCCTCCAACAGTACCAACAAATGAAggaacaacaccaacaacaaaactaCAAGAGCCAACAGCGAACTTCGTCCAAACCAACCAACTCGGAGTCACAAAAACCAACCAAAACGGAAAGCCAACAACACAGACCTAATTCGGAAAGCCAACAACATAGTCAGGAAAGAAATGGTGTAGACGAGCACACAGACAAACACAAGGAagtcaaaagaagaaaacacagTATGGATAGCAACGAAAACAAATATTGCAAAACAGTTGAAGAAATGGATGACAGAAATGACAAGTATGAAGCCTCAAGAAGCAGAAATGTGGACAACTATGCCAAAACCGTAGAAGGAATGGATGCAACAAGAGACAGGAATGAGAAGCATAGAGATAAATATGCAGAAGACATAGAATATAGAGACAAGCATGCCAAAATGGCAGGCGATATGGATTTAACAAACAGAAATACAGACAAATATAGAGAATATTCCAAAACGGCAAACGACATGGATTCACCACGCACAAGAGACAGGGACTTCGccaacaatgaaaaagagtttgaaaattCTCCAAATGACGAAGAAATCAATAGAGAAGgcagagaagaagatgaacaaagAAACGAGTTCGGCAAAAGAGAAGCGATGGATAGTGAAGATGAAAGACACGAACAAAGCCGAAGTGAAATCGGAGACAACCGAAGTGAGATCGGAGATAATCGAAGTGAAATGGATGATGTAGACATGAATGGAGATGAAGATTTTGATGCCAAAGTGAAAAGAGAATTAAAAAGTATAAATGAAGACGATGAAAATATGGAAGGAGGATTTGATGAAGATGGAGGTGAGAGAATGGATAAAGTTGGAGATAGatgtaataacaataacaatggaGATGTGAAAGTGGAGATTAAGCATGAaatggaagatgaagaagatatCGATGTAGGAAACAATCATTGTTAA
Protein Sequence: MPFISSTDSSAFEGSFPPSGQEIALSTQLVRSEDRWLCKVVSLSREMFSVSRALNTTRTPGPPTTPPLGASFKCLDCETKFGTPEDLQNHMKEEHNVHPAPLSPSAPHTPPSHPSLMSPLSRSISKLHSSVYQSSPSPLSFPLQFPLASSPSRYSGSPGSIPNARYMCNYCSNGSEGFSSLESLHVHIQTAHGSLLNGDLIREISNPSLRNDLNSSDALKAHISSAQARTDLNALRSDLSSADALKAISSAQNALRSDLSSLYARSNATVSELLSYQQREGKYAQYLTHALNGVTNGEAGTEEGGVKNEGFSPPDQQTKPTDLTVSKKHKLKSAHNNNNNNGPTYDPNKRIKLNGASTNSSELSSVIKHYENAHKLHICSQCDATFPDLASFSLHQKTHLDNDLHRLNNNTTSPELQCKQCSSVFADIRQLSEHFVSHCLAMLKLFQCGACQLSFGSGEELTKHLGETHVCKVYKCGLCSEMYDSKLLIQLHFTQSHHKEVKLYRCTKCPPSPSSGDDTSSFSSHAEFASHVRSAHPLQPSDICTRILPQAPPLLQCIFCFRQFHSASELQLHLHEHTAGPLQCPLCPKTFRVQFLLETHLTTHHPALLSATDAQGQGGDAKPPALSPSTLKSLHISSPTNQNPLFSSSSNQNALFSSSSNQNALFCDLCDRKDFLSEPELAAHRKLHLSKSTGKVSLSCAYCAENFKSRAELEAHMRTHSVGGTAISTTNVVVPRVERGKHKCNICDEIYPTPTGLAEHKLTHCKVVHGTTCTKCKASITSEETFLSHLQQHSTSSNSSSSGGNIILPTSCIICCQTLNTEVETKLHSNFHLKPSPNSLQNAAFSGNPPNSVANFTRPPSSGANFTSSPNTFSNSATFTTSVASLKGNFSSERSERGFGAHSREDKRSEKELRKMMEMMRGGGGGGEKAKAFPCPQCPLSFDMEEEAQTHAQCCHLVTVHECRLCCQIYPDGGALQAHLIEHTFEGLSSYTCFVCLTQFTAVGGLQSHIRCHGPSARSYECVRCPARFFFKAELENHSLGHKEDGGRANYEKMSNYFHYQKSLQQYQQMKEQHQQQNYKSQQRTSSKPTNSESQKPTKTESQQHRPNSESQQHSQERNGVDEHTDKHKEVKRRKHSMDSNENKYCKTVEEMDDRNDKYEASRSRNVDNYAKTVEGMDATRDRNEKHRDKYAEDIEYRDKHAKMAGDMDLTNRNTDKYREYSKTANDMDSPRTRDRDFANNEKEFENSPNDEEINREGREEDEQRNEFGKREAMDSEDERHEQSRSEIGDNRSEIGDNRSEMDDVDMNGDEDFDAKVKRELKSINEDDENMEGGFDEDGGERMDKVGDRCNNNNNGDVKVEIKHEMEDEEDIDVGNNHC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00443392;
90% Identity: iTF_00443392;
80% Identity: -