Basic Information

Insect: Diaphorina citri
Gene Symbol: su(Hw)
Assembly: GCA_000475195.1
Location: CP125332.1:43016524-43027990[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00042 0.037 15.9 0.5 3 21 104 122 102 123 0.94

2 13 9.1e-07 8e-05 24.3 1.2 1 23 177 200 177 200 0.97

3 13 0.0001 0.0091 17.8 0.5 1 23 206 228 206 228 0.97

4 13 6.6e-05 0.0058 18.4 3.1 1 19 234 252 234 254 0.97

5 13 1.8e-07 1.6e-05 26.5 0.3 1 23 266 288 266 288 0.97

6 13 0.0014 0.13 14.2 1.1 1 23 298 320 298 320 0.98

7 13 0.00011 0.0099 17.7 1.0 1 23 362 384 362 384 0.99

8 13 3.3e-05 0.0029 19.4 0.8 1 23 390 412 390 412 0.99

9 13 9.3e-06 0.00082 21.1 2.1 1 23 418 440 418 440 0.96

10 13 5.4e-05 0.0047 18.7 2.7 1 23 446 469 446 469 0.96

11 13 4.9e-05 0.0043 18.8 2.6 1 19 475 493 475 497 0.92

12 13 2.7e-06 0.00024 22.8 1.9 1 23 503 525 503 525 0.98

13 13 1.9e-05 0.0017 20.1 1.7 2 23 532 554 531 554 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00042	0.037	15.9	0.5	3	21	104	122	102	123	0.94
2	13	9.1e-07	8e-05	24.3	1.2	1	23	177	200	177	200	0.97
3	13	0.0001	0.0091	17.8	0.5	1	23	206	228	206	228	0.97
4	13	6.6e-05	0.0058	18.4	3.1	1	19	234	252	234	254	0.97
5	13	1.8e-07	1.6e-05	26.5	0.3	1	23	266	288	266	288	0.97
6	13	0.0014	0.13	14.2	1.1	1	23	298	320	298	320	0.98
7	13	0.00011	0.0099	17.7	1.0	1	23	362	384	362	384	0.99
8	13	3.3e-05	0.0029	19.4	0.8	1	23	390	412	390	412	0.99
9	13	9.3e-06	0.00082	21.1	2.1	1	23	418	440	418	440	0.96
10	13	5.4e-05	0.0047	18.7	2.7	1	23	446	469	446	469	0.96
11	13	4.9e-05	0.0043	18.8	2.6	1	19	475	493	475	497	0.92
12	13	2.7e-06	0.00024	22.8	1.9	1	23	503	525	503	525	0.98
13	13	1.9e-05	0.0017	20.1	1.7	2	23	532	554	531	554	0.95

Sequence Information

Coding Sequence: ATGTCCACGAGAGCCATGCGGAGTAGTCAGAGAAACAAGAAGgtggagatgaagaaagagacgGCAGAAGTTGAAGACAATACAGAGAGTCTAATGTTGGTtgtcgaagaagaaggagaagaactgGAGGGTGAGGCTCAAGCCGAGCAGGAGGAAGTTGAACAAGAGGAAACAAACGAGGCTGAGGGTGATGGTAATGAAGAACCAAAGGAAGAATTGTCCGATGCTGATGAAGGAATGCCAATAGATATCTACGAGTTTCCGAATGAAGATGACGCTGTGGGCGAGAAAACTGTGCCTGGACACTTGTGTAAGGGTTGCTACCGTATCTTTACCTCACAGGGGGGACTCAAGCGTCACTTGAGAGCATGTCCTAATATTGCCGACAAGTTGCCGGTGGACAAGTTGGACCTCCTGGAGCAGTCCACGGAAATGATGGatGATACAATGGCGGCTGAGGAGTTTGAGCGGGAAGGCATGTGTCATTGTTGTGGTGAAGATATTGACACGGCTCATGTGGGTGGCGAGTTCTCGTGCGATGATTGCGAGAAGACATTCAAGCTCAAGTCTAGTCTGGAGAGACATCGCCGCGTTATTCACTCAGAGGGGACCACATTTGATTGTCCCGAGTGTAATGCCCGCTGTCCGGACAAGGGAACTCTGGCCCGCCACATGTATACGCACACAGGTCTAAAACCATACGAGTGTCCTACTTGTCACAAGGAGTTCTCACGTCGCTATCATTTAGTAAGACATAACTATCAAACTGGATGTAACGGAGCTGCCAGACCTACCTTCCCTTGTCAGGTGTGTGGCCGCGTATTCAACCGCAAGGACAACCTGCGCGAACATCTGCGCGCGCATGCGGGCGAAACCAAGCGCAAGAAGAAATTCAAGTGTGACAAATGCGAGAAGCAATTCTACGGGTTAACCTTGTTGAGAATACATGAGCGACTACACGAGGAGGGCCATGGACTAAGTATAGATGAACAAGTTATTGAAGAAATCGGCAAGAATACTCCTGGACGTGGAAGACCTTCTGTGAAGAAGTTACTGAAAGGCATTGCTCCAActGAGAAACTGTACGAGTGTGACATTTGTAAGAACCGGTTTCCATCTAGTGGAGCTATGAAGAAACATCGCAGGAAACACACCGGGGAGCGACCCTATGAATGTAAAGAGTGTTACGCCAGATTTGCCGCCAAAGAGACTCTGAACCGCCACATGAAGACACACTCAGGCGTCAAACCCCATGTGTGTGAATACTGCGAGAAGGCATTCATACAGGCGTCCCAGCTCAAAGCTCACATGTTCCATCATACAGGTGAAAATGGGCACACCTGCGAGCTTTGTAACAAAACGTTCAATCGCAAGGCCCGTCTGGAACTACACATGAAGTACATTCACGAGGGTGCCGACCCCTACCAGTGCGATATTTGCCGCAAGACGTTCATCCGCAAAGAAGATCTAACGCGTCACTGTTTGCTGCACACGGGCGTCAAACCACACAAGTGTCCGATTTGCACGAAAGGGTTCACCATGAAATCGTCGCTCAAGATTCACTTGTTGACCCATACCAAGGAGCCGCCCAAGTCGTGCGAGGTGTGTGGACGCGCCTTCATTCGTCAGGACTGTCTCATCCGGCACCTCCGCCAGAAGCACCGTTCACATCTGGACGAGGTGTTGGCTCAGGGGGACAAGAAGAAACTGGAAGCTCAACTGCTGGCAGCGGCTGCTACGGAGCTAACCTCGGTTCTGGAggatggggaggaggagggagacgAGGGCGAAGGTGGAAATGAGAGCAGTGGAGATTCTCGCCGACCTCCCCGTGTTCTATCCGAGAAAGAACTGATCGAGTCTATGCAAGAATTACTCTCCCTACTTATAGACGAGGAATCACTCACCGCCTATGGATGGCCACACACCCCCGTCGAGACCGTCATTCAGTCCGTCATTAGCCAATGTGGTCACATGCCGGCTACAGAGTCAGAAGAAATGTCGTTTGCTGACAGCCTCCGTGAGAATGCTAAGCTACTATTCAGTGTGGTAACGGATGATGCTGCTATTAAACAACTCCTCAACAATCAAACCGTAGACCAGGTCATTCTACACATGCTCCGATTAGCCAAGAGCTAA
Protein Sequence: MSTRAMRSSQRNKKVEMKKETAEVEDNTESLMLVVEEEGEELEGEAQAEQEEVEQEETNEAEGDGNEEPKEELSDADEGMPIDIYEFPNEDDAVGEKTVPGHLCKGCYRIFTSQGGLKRHLRACPNIADKLPVDKLDLLEQSTEMMDDTMAAEEFEREGMCHCCGEDIDTAHVGGEFSCDDCEKTFKLKSSLERHRRVIHSEGTTFDCPECNARCPDKGTLARHMYTHTGLKPYECPTCHKEFSRRYHLVRHNYQTGCNGAARPTFPCQVCGRVFNRKDNLREHLRAHAGETKRKKKFKCDKCEKQFYGLTLLRIHERLHEEGHGLSIDEQVIEEIGKNTPGRGRPSVKKLLKGIAPTEKLYECDICKNRFPSSGAMKKHRRKHTGERPYECKECYARFAAKETLNRHMKTHSGVKPHVCEYCEKAFIQASQLKAHMFHHTGENGHTCELCNKTFNRKARLELHMKYIHEGADPYQCDICRKTFIRKEDLTRHCLLHTGVKPHKCPICTKGFTMKSSLKIHLLTHTKEPPKSCEVCGRAFIRQDCLIRHLRQKHRSHLDEVLAQGDKKKLEAQLLAAAATELTSVLEDGEEEGDEGEGGNESSGDSRRPPRVLSEKELIESMQELLSLLIDEESLTAYGWPHTPVETVIQSVISQCGHMPATESEEMSFADSLRENAKLLFSVVTDDAAIKQLLNNQTVDQVILHMLRLAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00443098;
90% Identity: iTF_00443098;
80% Identity: -