Dcit027326.1
Basic Information
- Insect
- Diaphorina citri
- Gene Symbol
- -
- Assembly
- GCA_000475195.1
- Location
- CP125329.1:41989208-42003795[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-06 0.15 12.7 21.0 44 220 37 211 33 220 0.44 2 2 6.4e-08 0.0032 18.3 0.2 349 382 424 459 404 472 0.79
Sequence Information
- Coding Sequence
- ATGGTGGATTGGTGGACACCTGTTGTGGGTGTGTTCTATTTctggttgaacaccctgtatactccaGAAGTTGCTATATGCTTATTGGTTGATATGGTGAATCTCTGTGATCAAGTGACGCGGCAAATCCAAAGCACCCTCGGTAACTACGAGGAGGTGAAACACCTGTTGGGTTCTGCCCATGATAGTATCTACGGTATTGATGGTCACCCGCCCCCTAGTCCTGCCCCCGCCACTACCCGTACACCTGTATCAAGGAGTACCACCACACCCCCTGTATCACGGAGTGCAGTACTGACCAGTGGAGGAGGGCCGGAGTTTAAGAAACCCACGCGCTCCTCCATGCCAACCTCGTCCTCCTCGtctagtaataataatcatcgTGATCATCATCATCCTTCCTCAACACAACGGGGCGGTTTCGAGAAGCCCATGGACAGCAAACCCCCATCAGGGGGGCGCGGGTTTTACCCCGGCCAGCCCGTCAAGCACGGGGGCATCGACCCTCGGTCTAGTGGTATCGTGCCTGCTAAGGGTCCACCTCCCCTATCCAATTCCAATCATCATTCGTCCAGCAGTAGGCCATCTAATGCGAGAAGTGtaaatagtagtaatagtaattcAAACGCCAGTACTCGACCTCACTCCGATCTCGTAAGCCTGTCAGACGGTCTAGGCCTGTCAGACGGTCTAGGCCTGTCAGACGGTCAAGGCCTGTCAGACGGTCAAGGCCTGTCAGACGGTCTAGGCCTGTCAGACGGTCAAGGCCTGTCAGACGGTCTAGGCCTGTCAGACGGTCAAGGCCTGTCAGACGGTCTAGGCCTGTCAGACGGTCAAGGCCTGTCAGACGGTCAAGGCCTGTCAGACGGTCAAGGCCTGTCAGACGGTCTAGGCCTGTCAGACGGTCTAGGCCTGTCAGACGGTCAAGGCCTGTCAGACGGTCTAGGCCTGTCAGACGGTCTAGGCCTGTCAGACGGTCAAGGCCTGTCAGACGGTCAAGGCCTGTCAGACGGTCTAGGCCTGTCAGACGGTCTAGGCCTGTCAGACGGTCAAGGCCTGTCAGACGGTCTAGGCCTGTCAGACGGTCAAGGCCTGTCAGACGGTCAAGGCCTGTCAGCCGGTCTAGGCCTGTCAGACGGTCAAggcctgtcagacagtctgagtCCTGTATCCACGCCCCCCTCCTCTGCCCCCTCCATAGCCCCCCCTTCCATCATCCCCACTGCTAACTTTCGTAACTCTGCATCATCTGGTCCTCCCAGAGCAGATGTAGAAAATATACTCAAGGAGATGACGGAAGTTATGCCAATGACACCTCTGACAGCCATTGCAGCCACACCTCGCAAGGAAACTGAAACCAAATTCATCTTCAATCCTGCCACGGGAAAAGTAAGCAATCATCTGTCGTCTGGGTTCTAG
- Protein Sequence
- MVDWWTPVVGVFYFWLNTLYTPEVAICLLVDMVNLCDQVTRQIQSTLGNYEEVKHLLGSAHDSIYGIDGHPPPSPAPATTRTPVSRSTTTPPVSRSAVLTSGGGPEFKKPTRSSMPTSSSSSSNNNHRDHHHPSSTQRGGFEKPMDSKPPSGGRGFYPGQPVKHGGIDPRSSGIVPAKGPPPLSNSNHHSSSSRPSNARSVNSSNSNSNASTRPHSDLVSLSDGLGLSDGLGLSDGQGLSDGQGLSDGLGLSDGQGLSDGLGLSDGQGLSDGLGLSDGQGLSDGQGLSDGQGLSDGLGLSDGLGLSDGQGLSDGLGLSDGLGLSDGQGLSDGQGLSDGLGLSDGLGLSDGQGLSDGLGLSDGQGLSDGQGLSAGLGLSDGQGLSDSLSPVSTPPSSAPSIAPPSIIPTANFRNSASSGPPRADVENILKEMTEVMPMTPLTAIAATPRKETETKFIFNPATGKVSNHLSSGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -