Basic Information

Insect: Diaphora mendica
Gene Symbol: -
Assembly: GCA_949125395.1
Location: OX421332.1:10045708-10061744[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00035 0.048 15.6 2.9 1 23 269 291 269 291 0.98

2 12 0.047 6.3 8.9 3.5 1 23 299 322 299 322 0.93

3 12 0.001 0.14 14.1 3.3 1 23 424 446 424 446 0.99

4 12 0.00059 0.079 14.9 2.4 1 23 454 477 454 477 0.97

5 12 0.041 5.5 9.1 2.4 1 23 481 503 481 503 0.98

6 12 0.00039 0.053 15.4 2.2 1 23 508 531 508 531 0.97

7 12 0.41 55 5.9 2.8 3 23 537 558 536 558 0.90

8 12 0.19 26 6.9 0.0 2 20 578 596 577 598 0.93

9 12 2.5 3.3e+02 3.5 0.1 2 23 645 667 644 667 0.93

10 12 5.2e-06 0.0007 21.3 1.1 1 23 676 698 676 698 0.98

11 12 0.00011 0.015 17.1 0.9 1 23 704 726 704 726 0.97

12 12 0.00083 0.11 14.4 4.9 1 23 732 755 732 755 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00035	0.048	15.6	2.9	1	23	269	291	269	291	0.98
2	12	0.047	6.3	8.9	3.5	1	23	299	322	299	322	0.93
3	12	0.001	0.14	14.1	3.3	1	23	424	446	424	446	0.99
4	12	0.00059	0.079	14.9	2.4	1	23	454	477	454	477	0.97
5	12	0.041	5.5	9.1	2.4	1	23	481	503	481	503	0.98
6	12	0.00039	0.053	15.4	2.2	1	23	508	531	508	531	0.97
7	12	0.41	55	5.9	2.8	3	23	537	558	536	558	0.90
8	12	0.19	26	6.9	0.0	2	20	578	596	577	598	0.93
9	12	2.5	3.3e+02	3.5	0.1	2	23	645	667	644	667	0.93
10	12	5.2e-06	0.0007	21.3	1.1	1	23	676	698	676	698	0.98
11	12	0.00011	0.015	17.1	0.9	1	23	704	726	704	726	0.97
12	12	0.00083	0.11	14.4	4.9	1	23	732	755	732	755	0.98

Sequence Information

Coding Sequence: atgtatgaCCTTAAAGCGTGCATTGCGTGTCTTAGTATTGACACAAAATTATACAATATGGACAGTGGACAATTGAGAAACGAGTTCCATTTAATTACAGGACTACAGACCAGTAAAGGCAGTGGTATGCCAgattatttatgttttcaatGCTCGGCATATTTAAAGAGTTGCATAAAGTTTCGGGACAGATGTCAACGGGCCCATTACGCTTTACTACAAATACTTAATATTAACAAAGAGataaagaaaacaaatttaacGGATTTCAACCGTTCTTTATTTGATATTATGCCACCACTATCACTCATGAATTTGGAGAAAGCTCATTATGAACAGACTAAGTTTCAATGGACACAACACAACCGACTGTCATATTCTAGTACTTTGAGGCTGAATGCCACGCCAATACTTCACTGTAGTACATTAACATCTGAGGATACTTTTAGTGCAGTAACTAACGTCCCAATAGAGCTTGAAATCACAAATGCCAAAATTAAAGATGACATTGATGAGATAGATCAGAGTGTTGTAAATTCTGACGTTGAAGCAATTAATGAGGATTACGTAGGTGAGACATCCTCTAATGTTGAATTAGCTGATGCATTTATGGATAATGATGACCCATTTGTCAGTGATGTTGAATCAGAATCATTAGAACCTAACAATATTTGTAAGAGTGAAAAAACAGATGGTGATGTTGATGGTTCAAATTTGGATGAAGAGTATGCTATGATGATACCCATATCGGTGAAAGAAGCCAAAGCTGTGGTGGAGGTGTATAAATTGTTCAGTCATGGGAAATTTCACTGTAAAGTATGTAATAAACCATATTACAGTGAGACGAGGTTAAATGAGCACATGAGGATGCATGAAAAGCACCTAAGTGGCACATTTCACTGTGAATTGTGTAACTATTACTACAAATCtgattatttgttaaaaacacaCATGACTGCAAAacatatgtataagtatgtctGTAGGAAATGTCCTGATGTtaattatgatagGACCTCTGCCAAACAACATTATATATGGGCTCATTTACCGAAAGGATGCAGGAAAGAAGCGAACTGGTACGAATCCCGACCCTCGTGGTTAAGTAACAAAGGTGGTGTAAGAAAAAAAGGTGTTGTCACTATGAAACCCGTCAGGAAACTAACGAAATTGCCTAAAGACTTCTTAGTATGCTCTTCCATACAACACGAAGAACAGTATGCTATTGTGCGAGAGAGACAGGACTCCAGGAACTATAGAGAAGCCAAATTTAAGTGTAATATGTGCTATAGAGGATTTAGGGAAATGGAGACATATAGCAAGCACATGAGGAAACACAGTTCGGAACATGCAGGTCGATTCGAATGTGATGTGTGCAAACTCCACTTCAGGGACCAGCGCAAAATGTACAAGCACATGAACATAGCTCACCTGTTCAAGTACACGTGTCAGTTGTGCACATACGTTTGCTATAATAGTGGTCAAGCACAAATGCATTATCGGTGGCATAAGAATGTCAAATATCCATGTCCTCATTGTAAAATGGAATTTtcGAAATCCTCAACGCGTCTCACTCACATCAGAATAAAGCATCCATCTACTAACCTTTGTAATCTGTGTGGACACAGTTTCGTCAGTAAAACGGGCCTGTACTGCCACAAAAACATCGCACACACTAAAGAGGAGAGAGAGTTGAGCGCTACGTTGAATGTGAACGAGTCGGACCCAACGTACTGCGCCGACTGTGATGTTCAgttcgtgagcgaagccgcctTCAACACGCACCTTGGGAGCTCCAACAAGCACGCCTCTACTAACCTGTCGACGAAGCCGAACCGTCGCAGGAAGAGCGAGGAAGTGGCCAAGCCGCGCGGTCGACCGAGTCGAGGCAATCGGCCCGAGATCGTCAACAATGGCGTCACCACGCCAACCACCTGCGAAGTGTGTAACGTAGTACTTGCCAACGACGTACAAGCTCGCAAGCACTACGAGTCCGAGCATCCCGACACGGAGTTCCTCAAACGGTACATGTGTGACGTGTGTGGACACACCACGAGGCAATACGCGAACCTGTTGGTACATATGCGTACTCACACCGACGAGAAGCCCTATGAGTGTCCACACTGCGACCGGCGCTTCAACATGCCCAGCAACAGGGACAGACATCTTGTCGTGCACACGGGTGAGAAGAGGTACGAGTGTCAACATTGTAACCGTCGGTTTTCGCAAAGCAGCgcttgcaaacttcacatacaAACTGTTCATTTCAAGATACCTTATGCGCCTTGGAACAAGAAGAACCGCAAACGACGCAAGcaGGAGATGGAGAATGCAAGTTTAGCGGCGACGTCCAACCTGCAGACACAACACAAGCTCACGTTCGACACCCAGAGCGATTATCTCAACGCTTATATCACCTACAATGACGAATAA
Protein Sequence: MYDLKACIACLSIDTKLYNMDSGQLRNEFHLITGLQTSKGSGMPDYLCFQCSAYLKSCIKFRDRCQRAHYALLQILNINKEIKKTNLTDFNRSLFDIMPPLSLMNLEKAHYEQTKFQWTQHNRLSYSSTLRLNATPILHCSTLTSEDTFSAVTNVPIELEITNAKIKDDIDEIDQSVVNSDVEAINEDYVGETSSNVELADAFMDNDDPFVSDVESESLEPNNICKSEKTDGDVDGSNLDEEYAMMIPISVKEAKAVVEVYKLFSHGKFHCKVCNKPYYSETRLNEHMRMHEKHLSGTFHCELCNYYYKSDYLLKTHMTAKHMYKYVCRKCPDVNYDRTSAKQHYIWAHLPKGCRKEANWYESRPSWLSNKGGVRKKGVVTMKPVRKLTKLPKDFLVCSSIQHEEQYAIVRERQDSRNYREAKFKCNMCYRGFREMETYSKHMRKHSSEHAGRFECDVCKLHFRDQRKMYKHMNIAHLFKYTCQLCTYVCYNSGQAQMHYRWHKNVKYPCPHCKMEFSKSSTRLTHIRIKHPSTNLCNLCGHSFVSKTGLYCHKNIAHTKEERELSATLNVNESDPTYCADCDVQFVSEAAFNTHLGSSNKHASTNLSTKPNRRRKSEEVAKPRGRPSRGNRPEIVNNGVTTPTTCEVCNVVLANDVQARKHYESEHPDTEFLKRYMCDVCGHTTRQYANLLVHMRTHTDEKPYECPHCDRRFNMPSNRDRHLVVHTGEKRYECQHCNRRFSQSSACKLHIQTVHFKIPYAPWNKKNRKRRKQEMENASLAATSNLQTQHKLTFDTQSDYLNAYITYNDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00824173;
90% Identity: iTF_00824173; iTF_01361015;
80% Identity: -