Dmen024231.1
Basic Information
- Insect
- Diaphora mendica
- Gene Symbol
- Rel
- Assembly
- GCA_949125395.1
- Location
- OX421320.1:19265456-19310770[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-24 1.5e-20 75.3 0.6 1 168 44 190 44 191 0.86 2 2 0.28 2.4e+03 -0.2 0.0 57 117 542 603 538 620 0.80
Sequence Information
- Coding Sequence
- ATGTCCACGAGTCCTAGTGATTATGACATGAGTGATTCCTCATATTCTGGGGCATCATGCATGACAAATTCTCCGTTTTATCAAGTACCAACAAAGTCACCTGACATGCCTTGCGGAACACAGCCGTTCCTAAGAATCATAGCACAACCACAGAATCGGTTCAGATTTCGATACGTCAGTGAGTTAGCTGGAACCCATGGCTGTTTGCTCAGCAATTCAGCTGCCACCGATGATAAGAGACTCTATCCAAGCGTTGAGttGCTGAATCACACAGATAGGGCCTTGATAAGGTGTACATTGGTTCAACACAACAATCCAAATGAGCATCCACACAAGCTCCATGATGAAGAGGACCGTGATGTCAGTCACATTGTACCTGAACATGGCAGTTATATGGTCggATTTCGCGGCATTGGCATCATACACACAGCTCAGCAAGAAatcAAAAAGAAGTGCAAGAAAATGGCTAAAGGAATCAATTTCAACATAGTTCGACTGAAATTCAGTGCTCATGATGTACAAACTGATAGGGAGATATGCGCTCCTGTATTTTCCGAACCCATATATAACCTAAAGCATGTGAGTATTTGCTTTTTTGAGCTTGATGAAACTGGCAAAAGGATTTGGGAAGGTGTCGGTCGGTTCACGCCTAGCGACGTACATCACCAATATGCTATTGCGTTTAGgacTCCAGCATATAGAGATCGTAAAAGTCCAGTGGATGTTAATGTATACATTGAACTAGTGCGAACTACCGACGGCCACAGGAGCGATCCCGTGGTGTtcaaatataaagctgaagaattctACAAACATgctaagagaagaaaaactaacTCAGCGAGCAGATTTAATAGTGTTCCTTTAGAAACTGTTCAACAAAATCCAgTTACAACAGCAAGAGACACGAACGAACCTTCAGTACTCGTTTTTAGTtttttatacCCATCATCCCTAAATGAAGGTGATAATACATACGGCACTCCAGAGACTGGTCTTTCTCTAGGAACAGATCCATTGTTGAGTTCTGAAAATAACGCAATGCAAACAAACGGAGAAATACAATTACCATTGGCACAGTTAGACCTGAATGATCTAGGTCCTGAGACCTTGCAAGGTATTGATCAAATGGACGACTTGAGTACATTTGCTAATAAATATTTGAACGAATTGCAAGAATTGTTTTCTGAcgatATATTAGAAAGTTTGGAGAGTCAATCTTCAACAGGCCTAGTCTCGGACTCCGGCAACATTAATTCCGAGattccGTTATCACCAAAAAGTTATGGCCTTGCTGAGGCTCAAGGTTGTTCTGAACCAGTTCTAATAAAAACTCAACGGGCAGGGGAGAAAAAGTACGTCGAGTTCAATGGTTTCTACAAAGCAGTAGACGACATCGAGGATAAAAAGTTATCACCAGAAGATGATGACCTTGTTGAGGCACAAGGTTGTTCTGAACCAGTTGTAGTAAACCCGCAACGGCCAGCGGAGAAAAAGTATAGACTTGAGATGAAGAGCGACGAGTATAATCCTTTCTACAAAGCAGGAGACGGCATCGAGGTTAAAAAGTTATCACCTGAAGATAATGACCTTGTTGAGGCACAAGGTTGTTTTGAACCAGTTGTAGTAAAAACGCAACGGCCAGGGGACAAAAAGCATAGACTTGAGATAAAGAGCGACGAGTACAACGCTTTCTACAAAGCAGAAGTGGGCATCGAGGTTAAAAAGctgATTAAAGAATTATGTGGATTGATCAAAGATAAGAAAGGTTTCAAGAAACAGGAAATTAGGAGGCGTTTGGAACTGTTATTCGACAAACGATTGTCAAATGGAGATACGTTTCTTCACATGAGCGTGTATTGCGATCCGGCTTGTATATGTTCTATAGTGAAGATGATCGACATTGTCAAAGCGACCTACTTACTCAATTACTCCAACGATAAACTGCAAACAACATTACACCTGACTATCTTAAGCAACATGCCCCAAATCGTTTCTCTTCTCATCAGCAAGGGTGCTGATCCTACGTTAAAGGATGATCGAGAGTACAACGCAATTCACTACGCTGTCAAATCTGGATTCTGTCTACAGACACTATTGGAAGCCATTAAGAAGAAAAATGTGGCTTGCAATATAAACGACTATAATGGAGAGAGGCAATCGGCCTTGCATATGGCTGTAATTGAAGACTCAGACCAGAGTGCTCGCCTATTGCTACAGCACGGCGCTAGTTACAGTGTACGAGATGAGTACGGGCGCACTCCATTACACCTCGCTGCTTATGATGACAGTCTTGACGTAACCCAGGCTCTGTTGGACTTTATACCTCAGAGCGAGATAGATGTCACCGATAAGTCTGGCAACACAGCACTCCAAATTGTTTGTGGCGGTGCTGTGAGAGAAAATTCGGTTCTAATTACTAGACTTCTATTGGAGAAAAAGACAAATCCTATCAAAACTGAAAATGGCAACCAGTCGGCGTGGCGTCTAGTGAAGAATAAGTTAGCACTAAAAGCAGTGCTGTGGGATTATATTCCTGCAGAATTCAAAGATGACCACGAAATTGACGAAGAAGTATTTCTGTCGGCCGACGAAGGCGAAACCAGTGATGGCATCACATCAACCTGA
- Protein Sequence
- MSTSPSDYDMSDSSYSGASCMTNSPFYQVPTKSPDMPCGTQPFLRIIAQPQNRFRFRYVSELAGTHGCLLSNSAATDDKRLYPSVELLNHTDRALIRCTLVQHNNPNEHPHKLHDEEDRDVSHIVPEHGSYMVGFRGIGIIHTAQQEIKKKCKKMAKGINFNIVRLKFSAHDVQTDREICAPVFSEPIYNLKHVSICFFELDETGKRIWEGVGRFTPSDVHHQYAIAFRTPAYRDRKSPVDVNVYIELVRTTDGHRSDPVVFKYKAEEFYKHAKRRKTNSASRFNSVPLETVQQNPVTTARDTNEPSVLVFSFLYPSSLNEGDNTYGTPETGLSLGTDPLLSSENNAMQTNGEIQLPLAQLDLNDLGPETLQGIDQMDDLSTFANKYLNELQELFSDDILESLESQSSTGLVSDSGNINSEIPLSPKSYGLAEAQGCSEPVLIKTQRAGEKKYVEFNGFYKAVDDIEDKKLSPEDDDLVEAQGCSEPVVVNPQRPAEKKYRLEMKSDEYNPFYKAGDGIEVKKLSPEDNDLVEAQGCFEPVVVKTQRPGDKKHRLEIKSDEYNAFYKAEVGIEVKKLIKELCGLIKDKKGFKKQEIRRRLELLFDKRLSNGDTFLHMSVYCDPACICSIVKMIDIVKATYLLNYSNDKLQTTLHLTILSNMPQIVSLLISKGADPTLKDDREYNAIHYAVKSGFCLQTLLEAIKKKNVACNINDYNGERQSALHMAVIEDSDQSARLLLQHGASYSVRDEYGRTPLHLAAYDDSLDVTQALLDFIPQSEIDVTDKSGNTALQIVCGGAVRENSVLITRLLLEKKTNPIKTENGNQSAWRLVKNKLALKAVLWDYIPAEFKDDHEIDEEVFLSADEGETSDGITST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -