Dmen018205.1
Basic Information
- Insect
- Diaphora mendica
- Gene Symbol
- Su(H)
- Assembly
- GCA_949125395.1
- Location
- OX421317.1:6297988-6310123[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-68 5.4e-64 215.3 0.0 1 123 225 347 225 347 0.99
Sequence Information
- Coding Sequence
- ATGCCGCACCAGTTCGGCGGCGCGGCGGGCGCGGGTGCGCTGGCGGGTGGCGCCTCGCCACCGGCGCAGCACGCAGCGCTGTTCCCGCGCTACGCGGGGGCAGCAGGACCCGGCGCCGGCGCCTACCGACCCGATGAGCGCCGCCTCACGAGGGAGGCCATGGAGCGGTACCTACGGGACCGCAGTGACATGGTTGTGGTTATATTACATGCAAAAGTCGCCCAGAAGTCGTATGGAAACGAGAAAAGGTTTTTCTGTCCCCCGCCATGTATTTACTTGTTCGGTGATGGCTGGCGACTGCGTCGCGAACGTATGTTACGTGAGGGTGAGACTGAGCAGGCGGCTCAGCTTTGTGCTTtcataggtataggtaattcaGATCAGGACATGCAACAGCTGGACTTGAATAATGGCAAACAATATTGTGCTGCCAAAACTCTGTACATATCTGATTCTGATAAGAGGAAGCATTTTATGCTCTCGGTGAAAATGTTTTATGGTAACGGTCACGACATAGGTATTTTCAATAGTAAGAGAATAAAAGTGATATCTAAACCCTCCAAGAAAAAGCAATCCTTAAAAAATGCAGATCTGTGTATAGCTAGTGGAACAAAGGTAGCTTTATTCAACCGTTTGAGATCACAAACTGTGTCTACGAGATACCTTCATGTGGAAAATGGTAATTTTCATGCATCTTCCACTCAATGGGGAGCGTTTACTATCCACCTGTTAGATGACAATGAGAGTGAATCTGAAGAGTTTGCCGTGAGAGATGGATATGTCCATTATGGCTCTACAGTTAAATTAGTTTGCTCAGTTACGGGTATGGCACTACCCAGACTAATAATAAGAAAGGTGGACAAACAAATGGCTCTCCTAGAAGCGGATGACCCTGTGTCTCAGCTGCATAAGTGTGCGTTTTATATGAAAGACACGGAACGCATGTACCTGTGTCTGTCCCAAGAACGCATCATACAGTTCCAGGCAACTCCATGTCCTAAAGAGCCTAATAAAGAAATGATTAATGATGGAGCTTGCTGGACTATTATATCTACTGATAAGGCAGAGTACCAATTTTATGAAGGAATGGGACCAGTAAGGTCACCAGTGACACCAGTTCCTCTTGTCCACTCGCTAAACCTAAACGGTGGAGGAGATGTTGCAATGCTGGAGCTGGCTGGGGACAACTTCACGCCTTCATTACAAGTGTGGTTCGGCGACGTGGAAGCTGAGACTATGTACCGATGTGCCGAGTCTATGCTGTGTGTTGTACCAGATATCTCTCAGTTCAGAGGACAGTGGCTTTGGGTTCGACAGCCAACACAGGTAACTTGA
- Protein Sequence
- MPHQFGGAAGAGALAGGASPPAQHAALFPRYAGAAGPGAGAYRPDERRLTREAMERYLRDRSDMVVVILHAKVAQKSYGNEKRFFCPPPCIYLFGDGWRLRRERMLREGETEQAAQLCAFIGIGNSDQDMQQLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGNGHDIGIFNSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENGNFHASSTQWGAFTIHLLDDNESESEEFAVRDGYVHYGSTVKLVCSVTGMALPRLIIRKVDKQMALLEADDPVSQLHKCAFYMKDTERMYLCLSQERIIQFQATPCPKEPNKEMINDGACWTIISTDKAEYQFYEGMGPVRSPVTPVPLVHSLNLNGGGDVAMLELAGDNFTPSLQVWFGDVEAETMYRCAESMLCVVPDISQFRGQWLWVRQPTQVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00636036; iTF_00156965; iTF_00821543; iTF_00708941; iTF_00823694; iTF_00869390; iTF_00637231; iTF_01197488; iTF_01151827; iTF_01360371; iTF_01435827; iTF_00822652; iTF_01501852; iTF_00280895; iTF_01075141; iTF_00282032; iTF_01332312; iTF_00908575; iTF_01166354;
- 90% Identity
- iTF_00445874;
- 80% Identity
- iTF_00156965; iTF_00821543; iTF_00869390; iTF_01151827; iTF_01360371; iTF_01501852; iTF_00280895; iTF_00282032;