Dfer017727.1
Basic Information
- Insect
- Diadocidia ferruginosa
- Gene Symbol
- sip1_2
- Assembly
- GCA_027564275.1
- Location
- JANSTW010055021.1:2666-4013[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-36 2.7e-32 113.3 2.3 132 275 1 138 1 138 0.95 2 2 1.6 1e+04 -3.4 0.0 115 125 155 165 151 167 0.68
Sequence Information
- Coding Sequence
- ATTATTGTTCCAAGGATTAAAAGTCAAGTAGATGAATGGGATCCAAGATTAGATCAAGTGCCGATTGACTCTTGGCTTCTGCCGTGGCATTTAGTTATGGGTGATCGATTGCTTCTTGTTTATTCAATAATTCGTCAAAAACTTAAAAAGGGTTTGGAAAATTGGCGCCCAGGTGATAGAAGTGCAATTGAGTGTATTCGGCCATGGAAAGAAGTATTTTCATCTAGCACTATGCACTCATTTCTTAGTATGACTGTAATACCAAAGCTTGAAATGGCTCTTCAATCAGTGGACATGAATACTACTGACCAATTTAATTACTTGGAGCTATTTGATTGGTTGGAGATGATTAATGTAGATGTGATTTGCCAGATACTAACTAAAAGTTTCTTTCCGCGGTTTCACGATTGTCTTTATGTCCGTTTAACAACCTCGCTGAAAAATGGTGAGGATTATTATAAAAATTGGCGCAGTGTTTTACCCAGTTCTATAATCCAGTTGCAGCCGATGCGATTCGAATTGTCACGAGCATTAATGGCAATAAATCAGGTAAAAAATGGTCTCATACCATTGCCACCAGTAAATTCTAATCTTCCACCAAATCCACCGTCATTTCAGCCATTTCCTCCCAACCTTATGCAACCAATACCACCTTCTAATATAAACACATTTTTTAGGCGTTAA
- Protein Sequence
- IIVPRIKSQVDEWDPRLDQVPIDSWLLPWHLVMGDRLLLVYSIIRQKLKKGLENWRPGDRSAIECIRPWKEVFSSSTMHSFLSMTVIPKLEMALQSVDMNTTDQFNYLELFDWLEMINVDVICQILTKSFFPRFHDCLYVRLTTSLKNGEDYYKNWRSVLPSSIIQLQPMRFELSRALMAINQVKNGLIPLPPVNSNLPPNPPSFQPFPPNLMQPIPPSNINTFFRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -