Basic Information

Insect: Diadegma fenestrale
Gene Symbol: salm
Assembly: GCA_037043255.1
Location: CM073314.1:13072640-13084611[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 5.7e-06 0.0005 20.5 0.9 1 23 488 510 488 510 0.98

2 9 1.1e-05 0.00099 19.6 2.1 1 23 516 538 516 538 0.98

3 9 0.071 6.2 7.7 3.8 2 23 982 1003 981 1003 0.98

4 9 4.9e-08 4.3e-06 27.0 0.6 1 23 1009 1031 1009 1031 0.97

5 9 6.8e-05 0.006 17.1 2.6 1 23 1041 1063 1041 1063 0.98

6 9 0.0024 0.21 12.3 1.9 2 23 1450 1471 1449 1471 0.97

7 9 0.015 1.3 9.7 1.1 1 15 1477 1491 1477 1491 0.94

8 9 1.2e-06 0.0001 22.7 2.1 3 23 1698 1718 1696 1718 0.96

9 9 2.2e-07 2e-05 25.0 0.9 1 23 1724 1746 1724 1746 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	5.7e-06	0.0005	20.5	0.9	1	23	488	510	488	510	0.98
2	9	1.1e-05	0.00099	19.6	2.1	1	23	516	538	516	538	0.98
3	9	0.071	6.2	7.7	3.8	2	23	982	1003	981	1003	0.98
4	9	4.9e-08	4.3e-06	27.0	0.6	1	23	1009	1031	1009	1031	0.97
5	9	6.8e-05	0.006	17.1	2.6	1	23	1041	1063	1041	1063	0.98
6	9	0.0024	0.21	12.3	1.9	2	23	1450	1471	1449	1471	0.97
7	9	0.015	1.3	9.7	1.1	1	15	1477	1491	1477	1491	0.94
8	9	1.2e-06	0.0001	22.7	2.1	3	23	1698	1718	1696	1718	0.96
9	9	2.2e-07	2e-05	25.0	0.9	1	23	1724	1746	1724	1746	0.98

Sequence Information

Coding Sequence: ATGCAGCTGATGCGATGGAGTATCACCGGAAGACTCGAGGGTCGCGGCATCAGTAAACCGAGACGCGACGGCGAGATCTGTCAGCAGGAACAACAAACGATCACGAATGATACTTTCTCGTGTCCGAGATATTCCGaagaagaaaatgacTCAGCGTCAGAGGGTGGGGAGAGCAACAACGGAGGTTGCGTTGTTGGTGCGGAAGCCGTCGGGAACGCGGTTGACGACGGTGCGGTCGATCTCACCGCTGCCCGCTCGAATCACGACGGCGAGGATGAAGATGATCGGGAAAACGATGAATTGCCTATGGAGGAGGACGAGACGGACGAGCTCGTGGACGAGATTGAGGAGCACGAGGAGGATGAGGAGGGTTCGCGAAAGCAAATGCGTCATCGACAAGATGCCGAGAACAACAATAGTTTTATCGGCGAGGGTGGCACGGGAACGAGCGAGGGAGGTACGGGAGCTGCAGCGGGGACGGCAGGACCGCAAGGAATCAGTGGTAGCGGGGTTGGTAGTAGCGCCAGTGGAACGGGAGCAAGTGGTGCATTCCCGGCAGCTGGCACGAGTCACGTTACCCTCGAGGCGCTTCAAAACACAAAAGTTGCGGTTGCTCAATTCGCAGCAACGGCACTTGCCGGTAGTGCGGACAGCGAGGCAGCTCTTCAAGATCTCGCCTTGTTGCAGAGCACCCTGTACACCCTTCAGCATCAACAGGTCTTTCAGTTGCAGTTGATAAGCCAGTTGCAGCAACAATTGTCGATAACACACGCAGGAGGACAGCCGGTTGTTGTAACACCCTCGCAACAACTATTGAGCAACAGCGGTATGGTGTGCGGGAATCCAACGATCGATACGTCGGTCACGCCTACGACAAACCCCGATACAAATATATGCAAAGAAACGTCAACGATCTCGCCGTTGATACATGCGAAATCAATAGCGAGTCTTACCTCACCACCGTCCTCACGACCGCCGAGTCATCATCAAACTTCGTCCTCACCGTTGTTGACACCGAGTAGTCTTGCGCAACAAGATCGACCGATTGATTCGTGCAGCACATCACCCATAGCTCTACCGTTGCCCCCGACTTCGAGCATGTCATTGGTACCGTCGGCGACAGCAGCAGTCACGAGTAATAGCAGTGAAATTGGCGTAAACAATGGCAGTTCGATGACTCAAACGGTCTCGACACCAATGTCACATCAGATGCACATGTGTTCAATAAGTTCCTCGTTAGCGTCGTCAATAATCACCAACAACGATCCGATGCCTCTCCACGAGCCGAATACCCTGGAGATGTTGCAAAAACGCGCCCAGGAAGTACTGGACAACGCTAGTCAGGGCTTGCTGGCGAACAATCTAGCGGACGAGCTGGCTTTCCGTAGTGGCAAAGGTTCGCGTCTCTCGCCGTACGATTCCAAGTCGGGTGGTGGTGGACGGGGCGAGCCATTCTTCAAGCATCGATGCCGTTACTGCGGCAAGGTCTTTGGAAGCGACTCGGCACTACAGATCCACATAAGATCTCATACAGGTGAGCGTCCCTTTAAGTGCAACGTCTGCGGAAGCCGATTCACCACCAAGGGAAACCTCAAGGTCCACTTTCAGAGGCATACGGCAAAGTTTCCACACGTTAAAATGAATCCGAATCCCGTGCCCGAACACCTCGACAAGTACCATCCTCCCTTGCTCCAGCAGTTAGCTGCCTCGGGTCAAAGACCTATGCCGTCcccaccgccgccgccgccgctaCCTCCGCCACCTCATCAAACACCGTCCCAACAGCATCATCAGCATCAGCAACATCACCAACAGTTACAACATCACGCGGCTGCAGTAGCCGCCGGAAACTTTcatccagcagcagcagcagccgcgGCGGCAGCAGCGGTAGCTCACGGGTTTCTTCCACCCCAGCCACCCTTGCCCCTGAGTCTTGCCTTGCCTGGTATGCCACCCCTCTATCGTCCCCCGATCGTTAATCATCGTGATGATCAGGATATCCCGGAAAACCTGAGTAAACCAGCTCCGTCGATCTCACCACAGTCACCCAATCCCTCCATCCATTCGAATTCGCATCATTCCTTTCacgagcaacaacaacaacgccaacaacaacaacaacaacaacaacaacagttccaacaacaacaaattccCCCTGCACGGACTGAATCTCCTAGAGCCAACTGCGACGATATTAAAATAGAACAAACATCACCGGTCGAAGAGCTGCAGCCTTACCAACCTCACCGACCTCCGAGTCGCGAACCCGAAGATAGTATAACGCCAAAACGTGAGCCCGAAGAACCTGAAGAAATCcaggacgacgacgagttcGACGAGACCGCGCAACGATATTTGAATCCCTCGACATCACCAGCCAATCATAACATCTCGCACGCACAATCTTACGAAGATTGTAGTATGGACAGTAAAATGAGTGCACGTCTCGAGCCTGACACTGATAATATGGACGCTGACGAAGAGATGGAAGAACAACCGGAGAATCTTTCGGGTCGTGCAagcggcggtggcggtggtAGCGGAAGTGGTACGAGTCGGTTGCCCCTGCCACAAGGAGTTGTAATGAGCGGAACTGGTGGCGGCGGTGGCTATCCCGGCGCTTCTCCGGCCAGCAGCAGCGCCAGCAGTGGAAGTCTTCAAACTTCTTTCGCTGGTATTCTCTTTCCTGGTCCACCGTCCCATCATCAATTGCCTCATCATCCATCCTCGACAACCGGCACAACGCCAACTGGAACTGGTGGCAACGAAATGATGGTGGATCCTGCTAGAGATCCAGCCATTTACTCCAGCCTCCTGCCGAGACCCGGTAGCAACGATAATTCGTGGGAGAGTCTCATCGAGATTACGAAAACTTCAGAAACATCGAAACTTCAACAGCTCGTGGACAACATCGAACACAAACTCACGGATCCCAATCAGTGTGTCATATGTCATCGTGTTTTATCGTGCAAAAGCGCATTGCAGATGCACTACAGAACTCACACGGGTGAGCGTccgttcaaatgcaaaatatgCGGCCGCGCATTCACAACCAAAGGAAACCTCAAGACTCATATGGGTGTTCACCGTGCGAAACCTCCTTTGAGGGTGTTGCACCAGTGTCCAGTTTGTCACAAGAAATTTACGAATGCGCTAGTTCTCCAGCAACACATACGCCTCCATACCGGCGAACCAACCGACTTGAGTCCCGAGCAGATACAAGCGGCTGAAGTCAACGAATTTCCACCGAGTTATCCGCATCATCCTCTCACGTCGTTTCTTCCGCAAGGTTTCCCAGGCTTGCATCCCGGCGGGCCGGGTTTCCCATTGGGGTTTCCTCCTTCGCGTCTTCACTCCCTAGACCGACATTCTCTCGAAAGCGATCTAGACGCAAAGGAACAAATGcatcaacagcaacaacacgCGCATCGCCATCACCAGATGCGACTGCAGCAGCATCAAGCCCAATTGCAAATGCAACAGAGGAGGTACCTTGAGGACGTGCAGAGTGAAGACATGGAGGATCAGGAGGACGAAGAGGAGGATCGTCGGGAGGATGACGAGAGGTGCGAAGACATGATGACGCGCGAGCGACGATCGGACGAAGAGGATGAAGATGATGTCAACGATTGCGACGACAATGACAGTAGAAAGGACGACATTGCATCGAGAGTGACGAGTCTTACGATACCAAGTTTCTCCACTTCGTTAGCCGCCCTTGAGAACCAAGTACGCACTATCACGACAACTGCCTCAGGGATGATTCCAACCagtaacaacaacaacaacaacaacaacagttcAGTCGGCTGTTCACCAAGCCCTTCGCATCGATACAACGGTAGCGAAAAAAGCGTTAGTCCCGTGAACAGTACGGGCGGTGGTGGCGCACCTCTCGATCTAACACCAAGAGCATCCTCGACACCGGCTTCTTCCGTAGTCTCTGCCACGACCACCCCACCACCAACTCCTCAAAGCCTCGGGCATCATCATCCGCATCATTCGTTCGGAATGTTTGCAGGCCTACTGCAGGCTGTGTCCTCGCAAACTCCAAGTATTATCGGCAATAGCATTCAACACGCTGGCCCGCCAGCCGGTGGTGCTACCGGCACTGTCGCTATTAACAGCTCCGCCGTAAACGTCTCCTCGTCGATTAACAACGCCGTTAGTCCAGGtggcggcagcagcagcggcggtGGCGGTAATAATGGCGGAAgcggcggcggtggcggcggAGGCGGACCTCTAGCCTCGCTAACAACATCCGCCGTACTCGCAGCGTCCTCCACCTATAATCCGCTCGGCCTGGCTGTCGGAGGGCCAGCAGTACGTGGCAACACCACGTGTAATATCTGCTACAAGACATTCGCGTGTAACTCGGCACTGGAGATTCACTATCGGAGCCACACGAAGGAGCGACCCTTTAAATGCAGCATTTGCGACCGTGGCTTCTCGACAAAGAGTGACGGAACATGGATGAAATCGTGTAACTGCATGGAGCAACCAAATCTCTTTGCCGGAGAAATCCTACAGTCAAACCCACCGGCGTCGTACAACTCGCTCGGGAGTGCGGGCCTTCCTGACGGTGGTGTCTTGACCACCGGAAGTCAGGAAACCAGGCCGAAAAGGAACAGGCGGCGGCGGACTGAGGAACAGAAAAACCGGGGGCGGACTGGGACCGGAGGGGGGCGAGGGCTGACGTCTGCCTATGCTGCCGTCCGCCTGCCCCCGCTGATGCCCCCCGCCCTCGGACTTCTAGCCTCGGACCACGTCTTCCTGGGAAACATGAAGCAGCACATGCTGACTCACAAAATTCGTGACATGCCACCACATTTGTTCAACGATTCCAAGCAACCGGgtcaacagcaacaacaatcaACGCAGCAACAATCGCAAGAGCCCGAAAACTCGAGGAGTCCAATGTGCATGGACGAATCGAGTCTTCCGCCGCCACCGCCTCCTCCTCCACCCCCACCGCCGCCGATGCCACCCTCGTCGATGGAATCACCCATGCCTGTCAAGAGATCACCGTCGGAGGGTGATTTGCCGGCTCCTAAAAGGCCCAGCATGTCGAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTCTCCTCGTCCTCGGCGCTCCAGATCCATATGAGAACTCATACGGGCGACAAGCCTTTTCGATGCACCGTCTGTCAGAAAGCCTTCACGACCAAGGGCAATCTCAAGGTTCACATGGGAACTCATATGTGGACGAACGGAGCATCGCGAAGAGGTCGACGAATGTCTTTGGATCTTCCGCCCCTGCCAATAACGCCCAAGGACTCGGAGTTTCTTCAGCGTCGTCCTGATCTTTTTTATCCATACTTACCAGCCCCTTTCCTTAACGGAGTCCAGCAGAAACTGAACGAGATTTCGGTGATTCAGAGTAACAACGGCTTACCGGCACATCCGGTGAGCGCAGGAAAATACGCTGGTCTTTTTGGTTCGATTTACGGTGGCGGTGGATTTCCCCTGGAGAAACAGCCGATGGCGCCGAGCAACGGTCCACTGGCGGATGGAAAGTCATCATTGCCTTCGGGATCGATGCTTTTCCAGACGCCGTCGCCGTCGCATTCTCCAGGAACGCCATCGTCCAACACCGGCAATCAAAATTCCGCGAGTGTGCCTGCCTGGAGCGGAGAGACTTTGCAGCATCACTTTGAGCGGGAGGTTACGGTATCGAGGCCAGAGAACAATTCGACGCCGCCATCGGCCAGGATTCAGCCACCGTCAGCCCCCAGAGGCGAAGGACTCGCTGCGTGA
Protein Sequence: MQLMRWSITGRLEGRGISKPRRDGEICQQEQQTITNDTFSCPRYSEEENDSASEGGESNNGGCVVGAEAVGNAVDDGAVDLTAARSNHDGEDEDDRENDELPMEEDETDELVDEIEEHEEDEEGSRKQMRHRQDAENNNSFIGEGGTGTSEGGTGAAAGTAGPQGISGSGVGSSASGTGASGAFPAAGTSHVTLEALQNTKVAVAQFAATALAGSADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHAGGQPVVVTPSQQLLSNSGMVCGNPTIDTSVTPTTNPDTNICKETSTISPLIHAKSIASLTSPPSSRPPSHHQTSSSPLLTPSSLAQQDRPIDSCSTSPIALPLPPTSSMSLVPSATAAVTSNSSEIGVNNGSSMTQTVSTPMSHQMHMCSISSSLASSIITNNDPMPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRSGKGSRLSPYDSKSGGGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQLAASGQRPMPSPPPPPPLPPPPHQTPSQQHHQHQQHHQQLQHHAAAVAAGNFHPAAAAAAAAAAVAHGFLPPQPPLPLSLALPGMPPLYRPPIVNHRDDQDIPENLSKPAPSISPQSPNPSIHSNSHHSFHEQQQQRQQQQQQQQQQFQQQQIPPARTESPRANCDDIKIEQTSPVEELQPYQPHRPPSREPEDSITPKREPEEPEEIQDDDEFDETAQRYLNPSTSPANHNISHAQSYEDCSMDSKMSARLEPDTDNMDADEEMEEQPENLSGRASGGGGGSGSGTSRLPLPQGVVMSGTGGGGGYPGASPASSSASSGSLQTSFAGILFPGPPSHHQLPHHPSSTTGTTPTGTGGNEMMVDPARDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPSYPHHPLTSFLPQGFPGLHPGGPGFPLGFPPSRLHSLDRHSLESDLDAKEQMHQQQQHAHRHHQMRLQQHQAQLQMQQRRYLEDVQSEDMEDQEDEEEDRREDDERCEDMMTRERRSDEEDEDDVNDCDDNDSRKDDIASRVTSLTIPSFSTSLAALENQVRTITTTASGMIPTSNNNNNNNNSSVGCSPSPSHRYNGSEKSVSPVNSTGGGGAPLDLTPRASSTPASSVVSATTTPPPTPQSLGHHHPHHSFGMFAGLLQAVSSQTPSIIGNSIQHAGPPAGGATGTVAINSSAVNVSSSINNAVSPGGGSSSGGGGNNGGSGGGGGGGGPLASLTTSAVLAASSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCSICDRGFSTKSDGTWMKSCNCMEQPNLFAGEILQSNPPASYNSLGSAGLPDGGVLTTGSQETRPKRNRRRRTEEQKNRGRTGTGGGRGLTSAYAAVRLPPLMPPALGLLASDHVFLGNMKQHMLTHKIRDMPPHLFNDSKQPGQQQQQSTQQQSQEPENSRSPMCMDESSLPPPPPPPPPPPPPMPPSSMESPMPVKRSPSEGDLPAPKRPSMSSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPAHPVSAGKYAGLFGSIYGGGGFPLEKQPMAPSNGPLADGKSSLPSGSMLFQTPSPSHSPGTPSSNTGNQNSASVPAWSGETLQHHFEREVTVSRPENNSTPPSARIQPPSAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00798757; iTF_01102248; iTF_01101532; iTF_01103755; iTF_01103003; iTF_01306698; iTF_00263755; iTF_00262860; iTF_00265931; iTF_00266657; iTF_00829718; iTF_01100795; iTF_01129531; iTF_01299486; iTF_00828992;
90% Identity: iTF_00266657;
80% Identity: -