Basic Information

Insect: Diadegma fenestrale
Gene Symbol: -
Assembly: GCA_037043255.1
Location: CM073311.1:17752438-17758916[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.5e-06 0.00022 21.6 1.7 1 23 307 329 307 329 0.98

2 9 2.4e-08 2.1e-06 28.0 1.6 3 23 337 357 335 357 0.98

3 9 0.00019 0.016 15.8 0.4 1 23 363 385 363 385 0.98

4 9 1e-06 9.1e-05 22.9 1.5 1 23 391 413 391 413 0.99

5 9 1.8e-05 0.0016 18.9 1.7 2 23 548 569 547 569 0.96

6 9 2.3e-09 2.1e-07 31.2 1.6 1 23 575 597 575 597 0.98

7 9 0.00053 0.047 14.3 0.6 3 23 605 625 603 625 0.97

8 9 7e-05 0.0062 17.1 1.4 1 23 631 653 631 653 0.99

9 9 0.016 1.4 9.7 0.8 1 23 659 683 659 683 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.5e-06	0.00022	21.6	1.7	1	23	307	329	307	329	0.98
2	9	2.4e-08	2.1e-06	28.0	1.6	3	23	337	357	335	357	0.98
3	9	0.00019	0.016	15.8	0.4	1	23	363	385	363	385	0.98
4	9	1e-06	9.1e-05	22.9	1.5	1	23	391	413	391	413	0.99
5	9	1.8e-05	0.0016	18.9	1.7	2	23	548	569	547	569	0.96
6	9	2.3e-09	2.1e-07	31.2	1.6	1	23	575	597	575	597	0.98
7	9	0.00053	0.047	14.3	0.6	3	23	605	625	603	625	0.97
8	9	7e-05	0.0062	17.1	1.4	1	23	631	653	631	653	0.99
9	9	0.016	1.4	9.7	0.8	1	23	659	683	659	683	0.95

Sequence Information

Coding Sequence: ATGATTGCAGATACTGGCGCGCCATACGTGTTGTACAAGGACAATATGGAGAGGCCCCAGGGCCAATGGCCCTCGGGACCAGGAGCTCTCCAGGATGGCGGTCTTTACGctcagcaacagcagcaacagcagcagcaacagcaacagcaacagcagcagcaacaacagcagcagcagcagcaacagcaacaacagcagcaacaacagcaacagcaacagcaaccgCAGGGTTCCTCGTCGTCGGGTAGTCCGCAACAGGCTTGTGGTCCACCGGTCGAGGGCGAAACGGGTCCGCCGCCGACGTTAGCGTCGCCGGTTGCTTCGCCGTATCCGTCAGCAGCGCCGGAGCCTCAAACGCTTTCGCCGCCTGACGATGACATACAATCGAATCAGTCGTCCGcccagcaacagcaacaacaacaacagcaacagcagcaacaacaacaacagcagcagcagcagcaacaacaacaacagcaacaacaacagcaacaacagcagcaacaggtCCAACAACAAGTTCAACAgacgcaacaacaacaacaacagcaacaaggACAACAGCAAGAACACTCGCCTCAACAACAATTGACGCCTCACGAGGTCGAACGGAGCGATTGCTTTCCCGGCAGTGCCGATCTTCAACAATATCCTCAACATTATTTCAAAGAAGCCAGACCACATCCCTCGCCATCGGTTCCACCTCACATGCTCACTCCCGGTGGATTCTCCGCTCTTCATTATCTCAAACAACCCGGTGTTATGCTCACTTCTCTCGGACAAGGCGACGGCGGACCCACTCTCGATGGACATCAATACGGCAGTCCCGGTGGTGCCAATATGAGCGCCACTGGCTTACCCGATATTGTACaacaaaatgggaaaaatggcaaaggcGCCAATAGCGATTTACGTCTCTTCAAGTGTCTTACCTGCGGCAAGGactttaaacaaaaatcaacgctCCTACAACACGAGAGGATTCACACGGATAGCCGACCTTATGGCTGTCCAGAGTGCGGAAAACGCTTCAGGCAACAGTCACACCTTACTCAACATCTTCGAATACACGCTAACGAGAAGCCATACGCTTGCGTTTACTGCGAGCGCACATTTCGTCAACGCGCCATCCTCAATCAGCATCTGCGCATACACTCGGGTGAGAAGCCATACCAATGTCCGGAGTGCGGAAAACACTTCCGTCAGAAGGCGATCCTGAATCAGCACGTCCGCACACACCAAGACGTGAGTCCACATCTGATATTCAAAAACGGGATGACGCCTACGCTGTGGCCGCAGGACGTGCCGTTTCCACCTGAAGAAGGGAAGGAGGAAGTTGCTTCGACGTTCGGGGACGGTGATACGCAGTCAGGGGCGTTCAGTCCATCGCCCGACGGTAATTCGATCCAATATCCGGCGTACTTCAAAGATCCGAAAGGGGGTAATCACGGTGTGTTTGGTGCGGGTGGACCGAGCAGTTTTGGCGCATTGCAATACATaaagcaacagcagcaacaacagcagcaaggaggaggaggagggggaggaggaggaggtggaggaggTGTGGGAGCTGGTGGAAAATCTTGTCTTCCGGATGTGATACAGCACGGGCGTTCGGCGGGTATGCCGTTGTACGTGCGTTGTCCAATATGTCAAAAGGAATTCAAGCAAAAGAGTACGCTTCTTCAACACGGTTGTATACACATAGAATCGAGGCCGTATCCTTGTCCAGAGTGCGGCAAAAGATTTCGACAACAGTCACACTTGACGCAACATTTGCGTATACACACGAATGAAAAACCATACGGTTGCGTTTATTGCGGAAGAAACTTTCGTCAACGCACGATATTGAATCAACATTTGCGCATACACACGGGTGAAAAGCCATACAAGTGTCAGCAGTGCGGTAaggattttcgtcaaaaagctATATTGGATCAACACACGAGAACCCATCAGGGTGATAGACCATTTTGTTGTCCAATGCCGAATTGCAGACGACGTTTCGCCACCGAGCCCGAGGTCAAGAAACACATCGACAATCACATGAATCCACACGCTACTAAGGCACGAAGAAATTCCAGTAGCGAGTCTAAACCACCAAATACACCAACGGGATTGGGTCCTGTGCCTGTACCAAGGGGATTGACGCCAACCGTCGTTAAACCCGAATTGTACTTTCCACAGTGTTACGCACCGGCCTTCAACCATCATCCACCTGTATCGAGCACCCAATTTCCGGTTGGACAATCGAACGGTGTCGTTGCCGGTGGCGTTGGCGCCGGAACCGAATTCAAACCACCCACGGGACTTCCGCCTCAGTGA
Protein Sequence: MIADTGAPYVLYKDNMERPQGQWPSGPGALQDGGLYAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQGSSSSGSPQQACGPPVEGETGPPPTLASPVASPYPSAAPEPQTLSPPDDDIQSNQSSAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQQVQQTQQQQQQQQGQQQEHSPQQQLTPHEVERSDCFPGSADLQQYPQHYFKEARPHPSPSVPPHMLTPGGFSALHYLKQPGVMLTSLGQGDGGPTLDGHQYGSPGGANMSATGLPDIVQQNGKNGKGANSDLRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCERTFRQRAILNQHLRIHSGEKPYQCPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGMTPTLWPQDVPFPPEEGKEEVASTFGDGDTQSGAFSPSPDGNSIQYPAYFKDPKGGNHGVFGAGGPSSFGALQYIKQQQQQQQQGGGGGGGGGGGGGVGAGGKSCLPDVIQHGRSAGMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCGRNFRQRTILNQHLRIHTGEKPYKCQQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHATKARRNSSSESKPPNTPTGLGPVPVPRGLTPTVVKPELYFPQCYAPAFNHHPPVSSTQFPVGQSNGVVAGGVGAGTEFKPPTGLPPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00214532;
90% Identity: iTF_00629286;
80% Identity: -