Dfen013835.1
Basic Information
- Insect
- Diadegma fenestrale
- Gene Symbol
- Sry-delta
- Assembly
- GCA_037043255.1
- Location
- CM073317.1:11784756-11786144[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-10 1e-07 31.7 0.1 6 40 12 45 7 49 0.88 2 2 4.2 3.9e+03 -2.2 0.0 30 38 71 79 71 84 0.83
Sequence Information
- Coding Sequence
- ATGTCTCAATCTCCGGAGGATCCGAAGCAAGTCGTTCTGGCTATGGAGGCTGTGAAAAATGGATTGTCCCTGAGAAAAGCTGCTGCTTATTTCGCCGTCTCGAAATCGAGTCTCCATCGTTACCTTCGTCTAGATGCGAGTACGATGGGTTATTTGAACTCGCCGAGGGTGACGTACTCTTgcaaaaattgtggaaaaatttaCAACTACTATTCGAGCTTGGCGAGACACTTGAAGCACGAGTGCGGCGTTGAGCCCAAGTTCCATTGTCCGCTCTGTCCTTACAGAACGAAGCATAAATCGAGTCTCAATACTCATCTCAACGGCAGGCACATGAAGAtcttgaacgatttttacacGATACCAAATGGCAACGAGACAGCTGCTTCGGACGGGAAGGATCTCAAGTTTTGA
- Protein Sequence
- MSQSPEDPKQVVLAMEAVKNGLSLRKAAAYFAVSKSSLHRYLRLDASTMGYLNSPRVTYSCKNCGKIYNYYSSLARHLKHECGVEPKFHCPLCPYRTKHKSSLNTHLNGRHMKILNDFYTIPNGNETAASDGKDLKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00266084;
- 90% Identity
- iTF_00439841; iTF_00266084; iTF_00266379; iTF_00266811; iTF_00265598;
- 80% Identity
- iTF_00439841;