Basic Information

Insect: Diachasmimorpha longicaudata
Gene Symbol: -
Assembly: GCA_034640455.1
Location: CM067948.1:11035997-11039634[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.4e-05 0.002 18.5 0.7 1 23 150 172 150 172 0.95

2 15 0.00091 0.073 13.6 1.1 3 23 180 200 179 200 0.99

3 15 6e-05 0.0048 17.3 0.1 1 23 298 320 298 320 0.98

4 15 0.076 6.1 7.5 0.1 1 23 326 349 326 349 0.97

5 15 0.00019 0.015 15.8 2.4 1 23 375 397 375 397 0.98

6 15 1.7 1.3e+02 3.3 0.0 1 23 413 435 413 435 0.86

7 15 0.47 37 5.1 0.2 2 23 442 464 442 464 0.94

8 15 0.0038 0.31 11.6 3.0 2 19 472 489 472 493 0.95

9 15 0.00019 0.015 15.8 3.5 3 23 501 521 499 521 0.97

10 15 0.014 1.1 9.9 0.1 3 23 528 548 527 548 0.97

11 15 7.9e-06 0.00063 20.1 0.4 1 23 557 579 557 579 0.98

12 15 0.0034 0.27 11.8 0.2 3 23 587 607 585 607 0.97

13 15 0.003 0.24 12.0 0.2 3 23 615 635 613 636 0.94

14 15 0.19 15 6.3 0.0 1 23 650 672 650 672 0.92

15 15 0.0024 0.19 12.3 0.0 1 20 1054 1073 1054 1076 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.4e-05	0.002	18.5	0.7	1	23	150	172	150	172	0.95
2	15	0.00091	0.073	13.6	1.1	3	23	180	200	179	200	0.99
3	15	6e-05	0.0048	17.3	0.1	1	23	298	320	298	320	0.98
4	15	0.076	6.1	7.5	0.1	1	23	326	349	326	349	0.97
5	15	0.00019	0.015	15.8	2.4	1	23	375	397	375	397	0.98
6	15	1.7	1.3e+02	3.3	0.0	1	23	413	435	413	435	0.86
7	15	0.47	37	5.1	0.2	2	23	442	464	442	464	0.94
8	15	0.0038	0.31	11.6	3.0	2	19	472	489	472	493	0.95
9	15	0.00019	0.015	15.8	3.5	3	23	501	521	499	521	0.97
10	15	0.014	1.1	9.9	0.1	3	23	528	548	527	548	0.97
11	15	7.9e-06	0.00063	20.1	0.4	1	23	557	579	557	579	0.98
12	15	0.0034	0.27	11.8	0.2	3	23	587	607	585	607	0.97
13	15	0.003	0.24	12.0	0.2	3	23	615	635	613	636	0.94
14	15	0.19	15	6.3	0.0	1	23	650	672	650	672	0.92
15	15	0.0024	0.19	12.3	0.0	1	20	1054	1073	1054	1076	0.94

Sequence Information

Coding Sequence: ATGGATGTGTCAGGTGACCTCACCCTTCAGTGGGTGGAGGAAGTGGGCAATGTTATTCACGAAGAAGTCATCTGTGGACTTGAGGCAGACCTCGAGACGCAGGAAGGTGAGGTTATTGGAGCCTGTGAGGAAGTGTGCATTGAGGAGGATGGACAGGGAGGATCTGAGCAGGAAGCAACACAAGATCTGCCACCGGACACAGAGATCCTCATGGTACCACAACCCAGCGATATGGAGTCGATATACATCGTTCCACAGGATCAGGGTcatgattatttaaatatacaaGTCACTGAGGAAGTCATCACTGATAACTGGGACAGATCTGGACCTGAAGATGGCGTCGAGATTCCAGAGACCAAAGTCTCTCATGACAACCTCTTGGAGTACGATGACATGGAGATTCCCCTGCCGATTGACCAAGATTCCTACACAAATACCCGACCTTATCCCTGCGACTTCTGCAGCCGCCGTTTTCGAAAGAAAGCCAACCTGATGAACCATATGGTCGCCCACCAAACTGATCGTCCTCACGGCTGTAATTTATGCGGTGCCCGCTACGTCCGTAAGTGTGATCTCAtgaatcatttgaaaattcacgcGTACGCCCCGACTCGCGACGGCGTAGAGGACGACCTTCAATCTGAGGATCTTCCCGATGACGATGATCCTCCCAAAGGTCGTCGAAAAAAGCCACAAGTTCCCCGAAAACGCAAAGCCATTCAAAaacgtcccatgaatccattAGACACATCCCTAGATCACGCAGACAAGCCCCCGAGGCTTCAAAAATCATTCGATTATGTTGATGAAGACATGCGCCTCCTCGAGGAGATGACAAGTCGGCCAAATTCAGCCCCTAGATGGCCAATAACCGATCCGACAAAACCATATGTTTGCCAGTACTGCGGTGTGAATTTCGCCCGGGAGAAGGCCCTCGCCTCCCACGCGCGAATTCACGGGGGTGACAGCCCCTTCGAGTGTACAAATTGCGGTGATATGTTCTGGGATGTAAATGCCCTTCGCGATCACATTCGCATTAAGCACGGTGTCACCCAATCCCCAATCGATGAATTTGAAACATCGGAGACCCCGTATACTGGGGACGATAGATTCGGTGAATTTTACTGCGAAACTTGTGGTGTTCCTTTTCATCGTCTCGATCTACTCAAACGTCATCGAAAGAATCACGTTAAACAGGAAGGTGGCGGTGAGCATGTGGATTCTGGTAATCATCATGTGTGTAACGTCTGTGGTGAATGGTTTGAAGAAGCACTGGCACTACTGGCCCATGCAGAACTCCACGCAAGATCACCAACTAGACGTTGTCTTCTCTGCGGTGAACGCTGTCGAGATGATGCAGAAGTCGCTGAACACGTGCGACTCATTCACGGAGAGGACGCACCACCAAATACATGCACCCTCTGTGGTAAAACATGCAAGGACAAGCGCAGTTTATTGAAACACTCGTGGGTTCATAATACCGATAAGACCTTCGGCTGCACAAAATGTGGTAAGAGATTTCATTCAAAAGCGCGATTACGAAGACACATGGTGAGCCACAGGAATAAAATGGTTGCTTGCGACGAATGCGGAGAGGAATTTCCCGATGGTAGAGCACTAGTATCCCACCGGCACTCGCATAATAAGGAGTTGGGGGGAAGATCATTTCCTTGTAGGGAGTGCGGAAAAACGTTTGGGAGCAGGAGCTCTCAACAGATTCACATTAGAATTCACACGGGTGAGAGACCCTACGGTTGTAGATTTTGTTGGAAAGCTTTTGCTGATGGAGGAACATTGCGGAAACATGAGAGGATTCATACTGGAGAAAAGCCGTATGGCTGTGCCATCTGTCCCAGGGCATTCAATCAGAGAGTTGTTCTTCGAGAACATGTACGAGCACATCACTCAGGACCTGATCCCAAGTGTCATGGAAGCCTGACGCCGTATCTCTGTAAGGTGTGTGGCGATTCATTTGGATCGTCTGAAGAGATAATTTTGCATATCGTGCAGCACTGCGATGACAACACGGCATTGAGACGACAGCCGCAAGTTGGACCGAGAAAGTACAAGCGGAGGAGAAAACTCAAGCCTCATGAGAGCCCGACAATTCCACAGAGGAATGAATTCGATACAGCTGAACTTTCGGAATCAGATGAAAATAACAAGCGCAAGACCAAGAAGAGTACAAAACGATCAATTGACGAGGGTTATCAATCTGTTCTCAAGTCATTTGAGAGTTCTATTCAGAATATCAATTCGATTGTGAGCAGTACGAAGGCCAGTAAGAGTAGtaagttgaagaaaaaactgAAGAAAGAGGAGAAGAAGGTCCCGGAGAGTAGCACAGCGTCTAACTCAGGACGCCCTAAAATGATTCACACGCAAAAAACGAGGGTGCCGGTTGAAATTGGTAGCGATGGGGTGAAGAAGGGTCAAAAGACAAAGACTATGGTTACGAGAACGCCGAAAGTTATGCCTGGAGAGCGTGGAATATTCCCGGGTGGTGAGAGAAACCGACCTAGGACTAAAAATGTCAGCTATCACATTGACGGGAGGAATGTCATTCCCGCTACTTTCCCAGGGATAACGGCTGAAATTATTGAGGGACCACCAGCACCACCAACAGAAATAGAACAAACACCAGCAccaccaccatcaccaccagcaccaataacaacaacaacaacaatacCACCATCGCCACCaccaacagcagcagcagcaccgCCTGCTCAAGAGTTCGTACACGTTCACATCAAGACTGAACCTCAGATGACCACAAGAAGATCAGCTGCCAATCATTCTAATGGAGATAATGTCAATCTCATCGAGAATGAGGCTAAGAAGAAAGTGAGGAAAGGCGGTAGGAAGATTGGTAGAGCTATAAAACAGGAGCCACGGGAGGAGATTATTGAGGAGCAGTTACCGGAGGATGAGGTTGTTGATGAAGTACCCAAGGTTGCTATGGAAATGGAGGTGGAGTTTGAGGAGACTGTTGAAGAGAATGGTGAGAGCATTCTACCGGATCTTGAATCTATTCATCACAATGATGTTGGACCGGAAAAGGTACGTCTGAGAGTCAAGGTGGAGCCTGCTGCTTCTAGCAGATTACTTGAGGAGGAGGTGCCTGAAACTATTATACCGGATGCACTTGAGTATACGTGTGAAATGTGCTCGGCTGTTTTTTCAAGTCGTGCAGAGTTACTTGTACATGTACCTATACATATTTGA
Protein Sequence: MDVSGDLTLQWVEEVGNVIHEEVICGLEADLETQEGEVIGACEEVCIEEDGQGGSEQEATQDLPPDTEILMVPQPSDMESIYIVPQDQGHDYLNIQVTEEVITDNWDRSGPEDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYVRKCDLMNHLKIHAYAPTRDGVEDDLQSEDLPDDDDPPKGRRKKPQVPRKRKAIQKRPMNPLDTSLDHADKPPRLQKSFDYVDEDMRLLEEMTSRPNSAPRWPITDPTKPYVCQYCGVNFAREKALASHARIHGGDSPFECTNCGDMFWDVNALRDHIRIKHGVTQSPIDEFETSETPYTGDDRFGEFYCETCGVPFHRLDLLKRHRKNHVKQEGGGEHVDSGNHHVCNVCGEWFEEALALLAHAELHARSPTRRCLLCGERCRDDAEVAEHVRLIHGEDAPPNTCTLCGKTCKDKRSLLKHSWVHNTDKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKELGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCHGSLTPYLCKVCGDSFGSSEEIILHIVQHCDDNTALRRQPQVGPRKYKRRRKLKPHESPTIPQRNEFDTAELSESDENNKRKTKKSTKRSIDEGYQSVLKSFESSIQNINSIVSSTKASKSSKLKKKLKKEEKKVPESSTASNSGRPKMIHTQKTRVPVEIGSDGVKKGQKTKTMVTRTPKVMPGERGIFPGGERNRPRTKNVSYHIDGRNVIPATFPGITAEIIEGPPAPPTEIEQTPAPPPSPPAPITTTTTIPPSPPPTAAAAPPAQEFVHVHIKTEPQMTTRRSAANHSNGDNVNLIENEAKKKVRKGGRKIGRAIKQEPREEIIEEQLPEDEVVDEVPKVAMEMEVEFEETVEENGESILPDLESIHHNDVGPEKVRLRVKVEPAASSRLLEEEVPETIIPDALEYTCEMCSAVFSSRAELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00048143;
90% Identity: iTF_01273966;
80% Identity: -