Basic Information

Insect: Diachasmimorpha longicaudata
Gene Symbol: -
Assembly: GCA_034640455.1
Location: CM067954.1:4716682-4721409[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0091 0.73 10.5 1.9 1 23 282 304 282 304 0.97

2 18 0.092 7.4 7.3 0.5 1 23 353 375 353 375 0.98

3 18 0.0077 0.62 10.7 0.3 1 19 412 430 412 432 0.95

4 18 0.27 22 5.8 2.1 1 23 445 468 445 468 0.88

5 18 0.055 4.4 8.0 1.7 2 23 474 495 473 495 0.95

6 18 0.019 1.6 9.4 0.1 3 23 524 544 522 544 0.97

7 18 2e-07 1.6e-05 25.1 0.5 2 23 592 614 591 614 0.97

8 18 4.9e-05 0.0039 17.6 0.2 1 23 620 643 620 643 0.94

9 18 3.2e-06 0.00026 21.3 1.3 1 23 654 677 654 677 0.96

10 18 5.2e-05 0.0042 17.5 0.9 3 23 687 707 685 707 0.92

11 18 0.31 25 5.6 0.0 3 20 766 783 764 783 0.94

12 18 0.00038 0.031 14.8 0.1 2 23 802 823 801 823 0.97

13 18 0.00011 0.0085 16.5 0.6 2 23 839 860 838 860 0.96

14 18 0.00018 0.015 15.8 0.2 1 23 881 904 881 904 0.91

15 18 0.068 5.5 7.7 0.3 2 23 973 995 972 995 0.95

16 18 0.00017 0.013 15.9 0.2 2 23 1016 1038 1015 1038 0.94

17 18 0.25 20 5.9 0.5 1 23 1044 1068 1044 1068 0.95

18 18 0.14 11 6.7 0.1 2 23 1126 1148 1126 1148 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0091	0.73	10.5	1.9	1	23	282	304	282	304	0.97
2	18	0.092	7.4	7.3	0.5	1	23	353	375	353	375	0.98
3	18	0.0077	0.62	10.7	0.3	1	19	412	430	412	432	0.95
4	18	0.27	22	5.8	2.1	1	23	445	468	445	468	0.88
5	18	0.055	4.4	8.0	1.7	2	23	474	495	473	495	0.95
6	18	0.019	1.6	9.4	0.1	3	23	524	544	522	544	0.97
7	18	2e-07	1.6e-05	25.1	0.5	2	23	592	614	591	614	0.97
8	18	4.9e-05	0.0039	17.6	0.2	1	23	620	643	620	643	0.94
9	18	3.2e-06	0.00026	21.3	1.3	1	23	654	677	654	677	0.96
10	18	5.2e-05	0.0042	17.5	0.9	3	23	687	707	685	707	0.92
11	18	0.31	25	5.6	0.0	3	20	766	783	764	783	0.94
12	18	0.00038	0.031	14.8	0.1	2	23	802	823	801	823	0.97
13	18	0.00011	0.0085	16.5	0.6	2	23	839	860	838	860	0.96
14	18	0.00018	0.015	15.8	0.2	1	23	881	904	881	904	0.91
15	18	0.068	5.5	7.7	0.3	2	23	973	995	972	995	0.95
16	18	0.00017	0.013	15.9	0.2	2	23	1016	1038	1015	1038	0.94
17	18	0.25	20	5.9	0.5	1	23	1044	1068	1044	1068	0.95
18	18	0.14	11	6.7	0.1	2	23	1126	1148	1126	1148	0.93

Sequence Information

Coding Sequence: ATGGACGAAGTTGTTGAGCTGGAGGCACTGGACAATGTGTGCAGACTTTGTCTATCAACGGACGAGCCCAAGTCACCAATATTCGGCGTCCAAGGGGCAGCTGTACCATTAGCCGAGAAGATTCAAGACTGTCTCAGCATTGAGGTGCTACGAGATGATAAACTCGGGACTTTGATATGTGCTAGCTGTGTCAAGAGTGTTAATCAGTGGCACTTGTACAGAGATTCCTGCCTCAGGTCGCAGGAGAAGCTCCAGAGATGGGTGGAGAAGCGTGGAGATGTTGCACCTCACATAAAATCGGAGCCAATCGACCCAGACGATGTGTCCTCCCCAGAGGATCTCATGAATACCATGGACAATATGGATGACCTCCCGGAGGATAGGTCACCTCCTCGATCCAAACGTCGTCATTCATCGAGCCATTCATCAGATGCGGAATCAACCTCGGGCTCGCAGCTCCTCATAAATCCAATGGCAGCAGCGGCGAAGGACCTCCTGGACTCTGCCTCAGTCGACTATCACCACACCTCccgtaaaaaattaaaacgcgGTCCCCACACTCACTTTCGCGGCATCAAAGTATTCAAACGTAAGTGCCCCCACTGCATGATCCACTTGCACTCAAAGCTATCGTACAATAATCACATGGAGCGTTATCATCGCCCAAATACCCCAAAATCCCGAAATGGTCCCCTATCATTTCGCCTCCCCTCTACCGACAAATCCTCCTCCCTCGACGAGGACGTAGAGATGGTTGAGGACGTTGAGGACGAGCTTCTCTCGATGGAGAAGAATGCACCGCTGACGCCAGTCCAAGAGAACATAATAAGCCAATTAAAAACCTTCTCCTGCTACTCGTGTCAGCAGGTGTTCAGCGATCGTCGAAGTACCCTGAACCACATACGCCAGCACATGCCGGATTTACGTCCTTACACGTGTATTGCATGCCTCACTGAATTTCCAGATCGTTCAATATACAAATTACACTGCGGTGCGTCATTCGATTGTGCTATGAAAATAGCCCTAGTGGTGCCAAAACATGgaacggaaaaatattttacgtgCAACATGTGCCTTAGACCAATGCCAAATCGTAAAGAACTTTTGTCCCATTTGTCAAAGCACTCGGACAAGGCTTACGAGTCAATTCCAACGATTGCAAATAAATCCCCAAAGAAGGATCGTACAACTATTGCACCAGGTCCCTATCGTCACGGTGATCCAGCGCATAATCACACGTGCGATTACTGCGGAATGATCTATCGCTACAAACCCAACATGTTGAAACACGAAGATCTTTGCAAACGTCTACCCCCAGACGAACGCACCTCCTATCGTTGCGCCCACTGTGGCATGACCTTCCTAGTTTTTAAGAAATTCCAATCACACATTACCCTGGAACACAATCGCAAAGACCTCGTCTGCTACGAGTGCAACGCCAAGTTCAAACAAACGAATGATTACCTGGTGCATCATCAGCAGCACAGAAACAGTGCAGTGAGGGAGGGCTCGAAGACCGTCTGGAAGAACTACAACTCCAGTTTGACGAAGGTGACGATGAAGTATGGATGTGCTGTCTGCCCCGAGGAGTTCCTTACCAAGGAGGAACTCACCCAGCACAGGCTGACCCATTCCAAGACGAAGAGCCCGGGGGAGAATCATGTTGAGGTTATTGATCCCGATGTGGAGGACAGCCTCAGCCAGTCGGGATCGGATGTCAATGCGTCCACGTACTCAATGCCGATGGAGAATAATTCTCACGGTAGGAGCACCGAGTGCACCACCTGCGGGAAGGTATTTGCCAACTATCCAAATTTACGGAGGCACATTAGAACGACTCATATAATCGAAGGTAGGTTCAGCTGTCCCAAGTGCCCGAAGACATTTAccagtgaggatttgtggaatCAGCACGCGGAGAGGGCTCACCCCAAGGACGTACCTGCTGAAGTAACGCCCTACAAGTGTACCCAGTGCAAGAAGGTTTTTGATTCGCAGGAATTGCTGAATCGCCATCTCCAGGAGTCACATGGAATAGCTGAGGACGATCACTTGGCCTGTGATATATGTGGGAAGCGCTTCAGCAACGAGACCTCACTGAAGATTCATCGGGGACATCACTTCAGACGTGATTCTAGGCTATCGATAAGATCAGTACCCCATCCGTTAGATCAGGTGCAGGTGGAGATCCAGGAGGGACCGATTGAATTGAACCTGACTCCACGTCCGGCTAAAGCCAAGAAGTCATTCCCAACGCCGAGTTTCAAGCAATCAATGTCACCGAATACTTTGGCCTGCGCTGTATGCGATGACTCGTTTGCTGATGTTGGTGAGTTGAGGAAGCACCTCTGGGAGGTTCACTGCCAGAAACACAAGTCGGAGAAGTCATTCGTTGAAGATCTACAGTGTGAGCTCTGTACGAATGTCTTTCCGGATGAAAAATCTCTCGAGGAGCACATGAGGTGGCACAAGGAGAATCCGATACTTGCGGAGGTGACGAGACCCGTCGACATCTCCTGCGACATATGCGGAAAATTTTACAGCTCGACAAAGGCCCTGTGGAAACACAAGAAGCTGCACAAGACGACGCCTGTTGCGGgcattaaatttcaatcacTAAAGAAGACAACACCGACGTCTTTTCCCTGTCCCGTGTGTAAGAAGGCCTTCAACAATGAGACTTCCATGAAGAAACACAAGGCTGCTGCCCACTACGTTAGAAGATCGTTGAACACGATAACCAGGAAGTCTACGACACCGTCTCCCTCGAAAGTTGATGAAGATGGAAAACCAAAACGACCAAAATTGGATTTTGATATCATCAGGAAGGCGTATCATCTTGGTGAGCCATCTGGCAGTAGCTTTGGAACACCCACCACCACCAGCACCACAACCACCACCACCAAGAAACCCGTCACCTGCGGTATATGCAAGAAACTCCTGCCCAGCATGAGCTCCCTCTACAAGCATCGACAGAACGTCCACAAGAGCAGTATTGGGAAACCTCTGGAGGTGGACGAGGGTGAGGTCGATGGTGAGGGGGTACCCTGCACCGAGTGCTACAAGATATTCTCCAATCCTGCCAATATGAAGCAACATTACACCAAGGTACATGGCAATGGTGACAAACACTACTGCACAATGGACGACTGCGAGGAAGTCTTTGATACTTCGCTGGCGAAGCAAGCGCACGAGAAAAGTCATATGAATATCTTGTACAGCTGCAATCTCTGCTCCAGGCACATGTTCAATCGATCTGCCATCGATGGACATCTTGTTAATGAACATGCGGACGAGGTTGAGGGGAAGAAGACTGAGCACTTCTACAGGAAAACTGATTTGGGAAGTTATGAAGTCAAGGGGGCTGATGGCAGAGTCTGTCCCATTTGCAAGATCAAGTATCCGAACATCAAAGCGATGAAGATTCATTATGTCAAGATTCATGAGGGAGTTAGTTAG
Protein Sequence: MDEVVELEALDNVCRLCLSTDEPKSPIFGVQGAAVPLAEKIQDCLSIEVLRDDKLGTLICASCVKSVNQWHLYRDSCLRSQEKLQRWVEKRGDVAPHIKSEPIDPDDVSSPEDLMNTMDNMDDLPEDRSPPRSKRRHSSSHSSDAESTSGSQLLINPMAAAAKDLLDSASVDYHHTSRKKLKRGPHTHFRGIKVFKRKCPHCMIHLHSKLSYNNHMERYHRPNTPKSRNGPLSFRLPSTDKSSSLDEDVEMVEDVEDELLSMEKNAPLTPVQENIISQLKTFSCYSCQQVFSDRRSTLNHIRQHMPDLRPYTCIACLTEFPDRSIYKLHCGASFDCAMKIALVVPKHGTEKYFTCNMCLRPMPNRKELLSHLSKHSDKAYESIPTIANKSPKKDRTTIAPGPYRHGDPAHNHTCDYCGMIYRYKPNMLKHEDLCKRLPPDERTSYRCAHCGMTFLVFKKFQSHITLEHNRKDLVCYECNAKFKQTNDYLVHHQQHRNSAVREGSKTVWKNYNSSLTKVTMKYGCAVCPEEFLTKEELTQHRLTHSKTKSPGENHVEVIDPDVEDSLSQSGSDVNASTYSMPMENNSHGRSTECTTCGKVFANYPNLRRHIRTTHIIEGRFSCPKCPKTFTSEDLWNQHAERAHPKDVPAEVTPYKCTQCKKVFDSQELLNRHLQESHGIAEDDHLACDICGKRFSNETSLKIHRGHHFRRDSRLSIRSVPHPLDQVQVEIQEGPIELNLTPRPAKAKKSFPTPSFKQSMSPNTLACAVCDDSFADVGELRKHLWEVHCQKHKSEKSFVEDLQCELCTNVFPDEKSLEEHMRWHKENPILAEVTRPVDISCDICGKFYSSTKALWKHKKLHKTTPVAGIKFQSLKKTTPTSFPCPVCKKAFNNETSMKKHKAAAHYVRRSLNTITRKSTTPSPSKVDEDGKPKRPKLDFDIIRKAYHLGEPSGSSFGTPTTTSTTTTTTKKPVTCGICKKLLPSMSSLYKHRQNVHKSSIGKPLEVDEGEVDGEGVPCTECYKIFSNPANMKQHYTKVHGNGDKHYCTMDDCEEVFDTSLAKQAHEKSHMNILYSCNLCSRHMFNRSAIDGHLVNEHADEVEGKKTEHFYRKTDLGSYEVKGADGRVCPICKIKYPNIKAMKIHYVKIHEGVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00351346;
90% Identity: iTF_00438264;
80% Identity: -