Basic Information

Gene Symbol
Rel
Assembly
GCA_034640455.1
Location
CM067955.1:7855499-7859134[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-43 4.2e-40 137.5 1.2 1 168 90 280 90 281 0.93
2 2 0.33 1e+03 -0.4 0.0 101 130 788 817 786 830 0.75

Sequence Information

Coding Sequence
ATGCCTGAGAAATACGACAATATTAATTTCCTGCAGAATGCACTCGCCGACCCTCAGAGTTTTTACAATTACGATATCTCAATTGCGTCGGCTCACATGCCGGTGACGACTCCATATATGAATTCTCCGGAGTCATCTTGCATGGCGTCACCAATGACGGTATCATCTCCTGAAGACTTGGACTTCCTGGGATCGTGTTCTGAGAGCACTCTTCTAAGGCTGGGAGAACCTGGAGGTTTTACTGCTGAACCTATGGATCCACCAGAAATCAAAATCCTGGATCAGCCAGTTGAGAAATTTCGATTTAGATACAAATCAGAGATGATGGGGACACATGGGAGCTTATCAAGTGCCAGCTCCACGTCGAGAAGGAAGCGACAGGTGCCTACTGTGAAGCTGTTAAATGGAATAGGCACGATGATAATTCGATGCACAATCGTTACAAAGAATACGGAACGCCGAATACCTCATGCTCATCACCTGGTAAAACGTGTGGGGAATGACGAGCGTGACATTCCCTACGAGATCGAAGTGTCAGAAGAAAACGATTACATCGCCTCCTTCGTAGGCATGGGCATAATTCACACTGCAAAGAAGCACATAAAAGACGAGTTAATGAAGAAGATGAGGGCCGAGAAGCTCGAGGAAATTCGCCGAAGGGACCCAAACAGAACTTCCCTGAATGTTCGCGAAGATACTGAGATACGAATGGAGGCAGACTCTGCCCAAAAGTGGATGGACCTGAACAGTGTTGCGCTATGCTTTCAGGCCTTCGTTAAGAACGAACACGGAGTTATGGAACCAAAGAGTCAGCCTGTCTACTCGAATACAATCAACAACTTGAAGAGCGCCTTAACTGGAGAGCTTAAAATCTGCCGAATTGATAAATACGCGAGCAGTTGTGCTGGCAACGAGGAAGTTTTTCTCCTGGTGGAAAAAGTGGGAAAAAAGAATattaaaatcaaattcttcGAATTGGACGATAAGGACAACGAGATTTGGACAGACTATGGTAAATTTTCGGAACTCGATGTGCACCACCAATACGCAATTGTTTTTCGTACACCTCCTTACAAAGACAGAGATATTACAGAGTCAAAGACGGTTTATATTCAATTGGAGAGACCGACTGATGGTGATTGCTCAGAGCCCATGCAGTTCACTTACAAACCGATGAATAATCTCCTCCAGAGGCCCACAAAACGCCCACGAATGTCATATTCAGAGAGTGTTGATTTGTCCAACATGATAGACTCAACAACAACAATGTCAAATCATGCTTTGGCCACGTGGAAGTCTGTCATCGCACCCATGACAGTCAGCGAACGATCagcagaattgaaaaaattattggatgaGAAATGTGATTCTGCTGAGTTTCGAGATTGCCTCGCCAACATTAATCTGGAAGAGTACATGGCATTGGACGATGATCCCCAACTACAATTTGTACCCATGTTAGAGACAGATGGGCCACAACATCGAGCTACTCCAGAAGGTTCAAACTTTGCaattaatattttgaaaaGAGCAGTTGAATCACTCAAGAACAATTCTAAACTTGATGAGAATGTGATAAAGATACTGAAGGAGAGAACTTCTTACGGTGACACTCCACTTCACGCAGCTATTCGCCATCACCAGAGGGACATTGCCAAATACATTCTGACACTCATAGCTGGATATCCAGAGTTGAATGATCTCGTGAGCATCGAGAGTGCATCAGGAAAGACTCCCCTTCACTACGCAGTTATTCTCAATCAAGCTGACATTGTTCGAGCTCTTTTACTTTTGGGAAGTGATCCCAATGCTTGCGACAGTCATGGCTCCTATGCTCTTCATGAAGCTGTCAAGCAGCCTGAAAATTGGCAGTGTGTCGATGCATTGATAAAAGGTAATGTCAATATTGAGCAGGATAATGATGCTGGCTGGACTGCACTCCAATTGGCAGCTGAGGCTGGCTCTGTGCCGGCCATTAAGTTGCTTGTCAAAGCTGGTGCTGATGTTAATAAATCAGAGCGGTCATATGGACGAACTGCATTGCACATTGCTGTGGAGGGGGGACACATCGATattgtcaaatattttctcgAGAACACACGTGTTAATGTTAATCAACAGAACTTCGGGGGAAATACGGCACTACATGCTGCGGTTGTTGATACAGGCAATCGTGCTCGAGAACTCTGCAAGTTACTCACCAAATATGGAGCTGATCCATCCATTAGGAATAACCAGAGAGCATCTCCAATTAATCATGCTAATGAGGAGGAGGAGCATGATGGATCTGAGGATATTAAGCAGGAGACCGATTCCAATGATGAGGATGATCTTGATGGACAATCGTCTTTTGACCTTGCAACGAAAAATAAAGATGTCAGTGATATTTTTTCGTCTGGTATTGAGTCCAACAATGCAGAGTTCGAGGTCAAAATCAAGGAGGAGATTATGGATGCGGATAATGAAGGAGATCTCGATTGGCTTGAGTTGGATGAAATAACGGATTTgggaaatattttggaaagTAATAATGGCTGGAAGTCACTTGCTCAACGACTTGGCTGCCATACATTTCTTTCGAATGCCTTGGAAAAGTCGGGGGCTAGTCCTGCGTTAACCATTCTAACATTTGCACAGGTTCAGGGGTTTACCATGAGCACATTGTTGGATTTGCTGGTGGATTTGAAGCAAAAGGAAGCTGCGAAGTATATCGAAAATGTCATAAGGAAGAAGGCTGATGGCgcacgataa
Protein Sequence
MPEKYDNINFLQNALADPQSFYNYDISIASAHMPVTTPYMNSPESSCMASPMTVSSPEDLDFLGSCSESTLLRLGEPGGFTAEPMDPPEIKILDQPVEKFRFRYKSEMMGTHGSLSSASSTSRRKRQVPTVKLLNGIGTMIIRCTIVTKNTERRIPHAHHLVKRVGNDERDIPYEIEVSEENDYIASFVGMGIIHTAKKHIKDELMKKMRAEKLEEIRRRDPNRTSLNVREDTEIRMEADSAQKWMDLNSVALCFQAFVKNEHGVMEPKSQPVYSNTINNLKSALTGELKICRIDKYASSCAGNEEVFLLVEKVGKKNIKIKFFELDDKDNEIWTDYGKFSELDVHHQYAIVFRTPPYKDRDITESKTVYIQLERPTDGDCSEPMQFTYKPMNNLLQRPTKRPRMSYSESVDLSNMIDSTTTMSNHALATWKSVIAPMTVSERSAELKKLLDEKCDSAEFRDCLANINLEEYMALDDDPQLQFVPMLETDGPQHRATPEGSNFAINILKRAVESLKNNSKLDENVIKILKERTSYGDTPLHAAIRHHQRDIAKYILTLIAGYPELNDLVSIESASGKTPLHYAVILNQADIVRALLLLGSDPNACDSHGSYALHEAVKQPENWQCVDALIKGNVNIEQDNDAGWTALQLAAEAGSVPAIKLLVKAGADVNKSERSYGRTALHIAVEGGHIDIVKYFLENTRVNVNQQNFGGNTALHAAVVDTGNRARELCKLLTKYGADPSIRNNQRASPINHANEEEEHDGSEDIKQETDSNDEDDLDGQSSFDLATKNKDVSDIFSSGIESNNAEFEVKIKEEIMDADNEGDLDWLELDEITDLGNILESNNGWKSLAQRLGCHTFLSNALEKSGASPALTILTFAQVQGFTMSTLLDLLVDLKQKEAAKYIENVIRKKADGAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00728445;
90% Identity
-
80% Identity
-