Basic Information

Insect: Diachasma alloeum
Gene Symbol: -
Assembly: GCA_001412515.3
Location: NW:38383-52402[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.6e-05 0.0012 18.6 0.7 1 23 150 172 150 172 0.95

2 15 0.0006 0.046 13.6 1.1 3 23 180 200 179 200 0.99

3 15 5.2e-05 0.0039 17.0 0.0 1 23 298 320 298 320 0.98

4 15 0.051 3.8 7.6 0.1 1 23 326 349 326 349 0.97

5 15 5.1e-05 0.0039 17.0 1.8 1 23 375 397 375 397 0.98

6 15 1.1 84 3.4 0.0 1 23 413 435 413 435 0.86

7 15 0.31 23 5.1 0.2 2 23 442 464 442 464 0.94

8 15 0.0025 0.19 11.7 3.0 2 19 472 489 472 493 0.95

9 15 0.00012 0.0094 15.8 3.5 3 23 501 521 499 521 0.97

10 15 0.009 0.68 9.9 0.1 3 23 528 548 527 548 0.97

11 15 5.2e-06 0.0004 20.1 0.4 1 23 557 579 557 579 0.98

12 15 0.0023 0.17 11.8 0.2 3 23 587 607 585 607 0.97

13 15 0.002 0.15 12.0 0.2 3 23 615 635 613 636 0.94

14 15 0.13 9.6 6.3 0.0 1 23 650 672 650 672 0.92

15 15 0.0016 0.12 12.3 0.0 1 20 1036 1055 1036 1058 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.6e-05	0.0012	18.6	0.7	1	23	150	172	150	172	0.95
2	15	0.0006	0.046	13.6	1.1	3	23	180	200	179	200	0.99
3	15	5.2e-05	0.0039	17.0	0.0	1	23	298	320	298	320	0.98
4	15	0.051	3.8	7.6	0.1	1	23	326	349	326	349	0.97
5	15	5.1e-05	0.0039	17.0	1.8	1	23	375	397	375	397	0.98
6	15	1.1	84	3.4	0.0	1	23	413	435	413	435	0.86
7	15	0.31	23	5.1	0.2	2	23	442	464	442	464	0.94
8	15	0.0025	0.19	11.7	3.0	2	19	472	489	472	493	0.95
9	15	0.00012	0.0094	15.8	3.5	3	23	501	521	499	521	0.97
10	15	0.009	0.68	9.9	0.1	3	23	528	548	527	548	0.97
11	15	5.2e-06	0.0004	20.1	0.4	1	23	557	579	557	579	0.98
12	15	0.0023	0.17	11.8	0.2	3	23	587	607	585	607	0.97
13	15	0.002	0.15	12.0	0.2	3	23	615	635	613	636	0.94
14	15	0.13	9.6	6.3	0.0	1	23	650	672	650	672	0.92
15	15	0.0016	0.12	12.3	0.0	1	20	1036	1055	1036	1058	0.94

Sequence Information

Coding Sequence: ATGGACGTGTCAGGTGACCTTACCCTCCAGTGGGTGGAGGAAGTGGGTAATGTTATCCACGAAGAGGTCATTTGTGGACTTGAGGCGGATCTGGAGACCCAGGAGGGCGAGGTTATTGGAGCCTGTGAGGAAGTGTGCATTGAGGAGGATGGCCAGGGAGGGTCTGAGCAGGAAGCGACACAAGACTTGCCACCGGACACAGAGATCCTGATGGTCCCACAGTCCAGTGATATGGAGTCGATCTACATAGTTCCACAGGATCAGGGTCATGATTATTTAAATATACAAGTGACTGAGGAAGTAATCACAGATAACTGGGACAGATCTGGACCTGAGGATGGcGTCGAGATCCCAGAGACCAAAGTCTCCCACGATAATCTCCTGGAGTACGATGACATGGAGATTCCCTTGCCGATAGACCAGGACTCGTACACAAATACCCGACCTTATCCATGCGACTTCTGCAGCCGTCGTTTTCGAAAAAAGGCAAACCTGATGAATCACATGGTGGCGCATCAAACTGATCGCCCACACGGCTGTAATTTATGTGGCGCCCGCTACGTCCGTAAGTGCGACCTAatgaatcatttgaaaattcacgcGTACGCCCCCACTCGCGACGGTCTGGAGGACGACCTCCAATCCGAGGATCTTCCAGATGACGACGATCCCCCCAAGGGCCGTCGAAAGAAACCTCAAGCTCCGCGAAAGCGCAAAGCTATTCAAAAGCGTCCCCTGAACCCATTAGACACCTCCCTAGATCACGCAGACAAGCCCCCAAGGCTCCAAAAATCCTTTGATTACGTCGACGAGGACATGCGCCTCCTTGAGGAAATGACCACCCGGCCGAATTCAGCCCCTCGATGGCCAATAACCGATCCTACAAAACCATACGTCTGCCAGTACTGCGGTGTGGGCTTCGCCCGGGAGAAGGCCCTTGCTTCCCATGCGCGAATCCACGGCGGTGACAGCCCCTTTGAGTGTACAAACTGCGGTGATATGTTTTGGGACGTAAATGCCCTTCGCGATCACATCCGTATAAAGCACGGCGTCACCCAATCCCCGATCGATGAATTCGAGGCTTCGGAGACCCCTTATACCGGGGACGATAGGTTCGGTGAGTTCTACTGCGAGACCTGCGGTGTTCCTTTTCACCGTCTCGACCTTCTCAAACGCCATCGAAAGATTCACGTGAAACAGGAAGGTGGGAGTGAGCAGGTGGACGCGAGTAACCACCACGTGTGTAACGTCTGTGGGGAGTGGTTCGAAGAAGCACTGGCACTCCTAGCCCATGCCGAACTCCACGCGAGATCTCCGACGAGACGTTGCCTCCTCTGCGGAGAACGCTGTCGAGATGACGCAGAAGTCGCGGAACACGTGCGACTCATTCACGGGGAGGACGCGCCTCCTAATACGTGTACCCTGTGTGGGAAAACGTGCAAAGACAAGCGAAGTTTGTTGAAACACTCGTGGGTTCATAATACCGATAAGACCTTCGGCTGCACAAAGTGCGGCAAGCGATTCCACTCGAAAGCGCGCTTACGAAGGCACATGGTGAGCCACAGAAACAAAATGGTGGCTTGTGACGAATGCGGGGAGGAGTTTCCTGATGGTAGGGCACTGGTGTCCCACCGACACTCACATAATAAGGAGTTGGGGGGAAGATCTTTTCCTTGTAGAGAGTGTGGAAAGACATTTGGGAGCAGGAGTTCTCAGCAGATTCACATCAGGATTCATACGGGTGAGAGACCATACGGTTGTAGATTCTGCTGGAAAGCTTTCGCTGATGGTGGAACATTGAGGAAACATGAGAGGATTCATACTGGAGAAAAGCCGTACGGCTGCGCCATCTGCCCCAGAGCGTTCAATCAGAGAGTAGTCCTTCGAGAACATGTTCGGGCACATCACTCAGGGCCTGATCCCAAGTGTCATGGAAGCCTGACTCCGTATCTCTGTAAGGTGTGTGGAGATTCTTTTGGATCATCCGAGGAGATCATTTTGCATATTGTGCAGCACTGCGATGACAACACGGCGTTGAGGCGACAGCCGCAGGTTGGACCCAGGAAATACAAACGGAGGAGAAAACTCAAGCCTCATGAGAGCCCGACAATTCCCCAGAGAAACGAATTCGACACCGTCGAACTTTCTGAATCCGATGAGAATAGCAAACGTAAAACCAAGAAGAGTACAAAACGATCTATTGATGAGGGTTATCAATCTGTTCTAAAGTCCTTTGAGAGTTCGATTCAGAATATCAACTCGATTGTGAGTAGTACGAAGGCGAGCAAGAGTGGAAAGGTGAAGAAAAAGCTGAAGAAGGAGGAGAAGAAGGTGCCTGAGAGCAGCACAGCGTCCAATTCAGGACGCCCGAAGATGATTCACACGCAGAAGACGAGAGTGCCGGTTGAGGTTGGTAGTGATGGAGTGAAGAAGGGACAGAAGACGAAGACCATGGTTACGAGGACGCCAAAGGTGATGCCCGGGGAGCGTGGGATATTCCTTGGAGGTGAGCGAAACCGACCGAGGACTAAGAATGTTAGCTATCATGTGGACGGGAGGAATGTCATCCCCGCTACTTTCCCAGGGATAACAGCTGAGATCATTGAAGCACCTCCAGCACAACTAGCAGAACCAGAACCAGCGCCACCATCATCAACACCAACACCAACACCACCGCCTCCTCAGGAATTTGTCCAGGTCAACGTCAAGAGTGAGCCTCAGATGACCACTAGGAGATCAGCTGCCAATTATTCTAATGGAGATAATCTCAATCTCCCTGAGATTGAGGCTAAGAAGAAAGTGAAGAAGGGGGGCAAGAGGGTTGGCAGACCTATCAAACAGGAACCTAGGGAGGAAGTTGTTGAGGAGCACTTACCGGAGGATGAAGTTGTTGATGAGGTGCCCAAGGTCGCTATGGAAATGGAAGTTGGCTTTGAGGAGACTATGGAGGAGAATGGCGAGAGCATTCTACCGGATCTGGAATCTGTTCATCACAATGTTGTTGTGCCGGACAAGGTCAGTCTTAGAGTCAAGGTGGAGCCTGCTGCCACCAGGAGGTTACTCGAGGAGGAGGTGCCTGAAACTATTGTTCCGGATACACTTGAGTACACATGTGAAATGTGCTCGGCTGTTTTTTCAAGTCGTGCGGAGTTACTTGTACATGTACCTATACACATTTGA
Protein Sequence: MDVSGDLTLQWVEEVGNVIHEEVICGLEADLETQEGEVIGACEEVCIEEDGQGGSEQEATQDLPPDTEILMVPQSSDMESIYIVPQDQGHDYLNIQVTEEVITDNWDRSGPEDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYVRKCDLMNHLKIHAYAPTRDGLEDDLQSEDLPDDDDPPKGRRKKPQAPRKRKAIQKRPLNPLDTSLDHADKPPRLQKSFDYVDEDMRLLEEMTTRPNSAPRWPITDPTKPYVCQYCGVGFAREKALASHARIHGGDSPFECTNCGDMFWDVNALRDHIRIKHGVTQSPIDEFEASETPYTGDDRFGEFYCETCGVPFHRLDLLKRHRKIHVKQEGGSEQVDASNHHVCNVCGEWFEEALALLAHAELHARSPTRRCLLCGERCRDDAEVAEHVRLIHGEDAPPNTCTLCGKTCKDKRSLLKHSWVHNTDKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKELGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCHGSLTPYLCKVCGDSFGSSEEIILHIVQHCDDNTALRRQPQVGPRKYKRRRKLKPHESPTIPQRNEFDTVELSESDENSKRKTKKSTKRSIDEGYQSVLKSFESSIQNINSIVSSTKASKSGKVKKKLKKEEKKVPESSTASNSGRPKMIHTQKTRVPVEVGSDGVKKGQKTKTMVTRTPKVMPGERGIFLGGERNRPRTKNVSYHVDGRNVIPATFPGITAEIIEAPPAQLAEPEPAPPSSTPTPTPPPPQEFVQVNVKSEPQMTTRRSAANYSNGDNLNLPEIEAKKKVKKGGKRVGRPIKQEPREEVVEEHLPEDEVVDEVPKVAMEMEVGFEETMEENGESILPDLESVHHNVVVPDKVSLRVKVEPAATRRLLEEEVPETIVPDTLEYTCEMCSAVFSSRAELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00048143;
90% Identity: iTF_01273966;
80% Identity: -