Dall009874.1
Basic Information
- Insect
- Diachasma alloeum
- Gene Symbol
- Hr39
- Assembly
- GCA_001412515.3
- Location
- NW:1229837-1259471[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3 5e+03 -4.1 10.0 46 163 183 297 148 317 0.69 2 4 3 1.2e+04 -5.7 6.1 78 144 325 395 304 430 0.37 3 4 3e-08 0.00012 21.0 0.0 1 23 496 518 496 578 0.90 4 4 4.9e-70 1.9e-66 224.6 0.0 202 408 648 849 625 849 0.94
Sequence Information
- Coding Sequence
- ATGTCGGAGCAAAACGCTCCCACAGACGGCCCAGGCTGGTGGCCACCAGCGCAACCATGGAAAAGTTCGTCCACGAGTGTTGCTGGCACATCAGTTGTGACACGCAATCCTGAGACGGGGAAAAATGTATCAGTGACGACAATCAATGTACCACCGGTACAGGATATGCACGATGGCAAAAGCGTCAAGTACCTGGGAGGCCAGAACGGCGTGACAGTATCAGTGGTGTCGTCCTGCGGCAGTAGCCCCAGCCCAGGACTGAATGGGCCGGAGCCAGGCTCAGTGGACGATCTCGAGGAAAGCGATGGCGAAGTCAGCAAGATCGACTTCCGTGGCGTCAACTTGCGAACGAAGAAGAAGCGGGACGGCGACCCAGACAGCGTCTCAACGGCGGACGACTCCCACGAGCAGCCGGAGCGTCCGATGTCCTGGGAGGGTGAGCTGTCAGACCAGGAGATGTCCTCGAACACGCTCGCAACCCAGGAGCACGAGGAGACCTCGATGGAGGGAGTGCAGGTGTGCAGTCTGAGTCCTGGGCCCCAGGAGCAAAAATTCCCGATAAAGCCTGAGCCAGATTACCGCTCAAGTCCTGGCACCCCCCAGGGCCACACAGACCCTGCGATGCCCCAGGCCCACAGCCAGAGCCTCCAGCACCCCCAGCCCCACCCCCAGAGGGACCTCGAGCCGAATCATCAGAGCGACCTCCCCCTTCTGGTCGGCAAACTCCTCGGGGGCTACAGCAGTTCGACCCCCAACCACAGCCCCATCCTGAACCCTCGTCACCACCTGCAGAAGCACAGCCACACGAGATCCCAGGTCCCATCCCCAGACTCAGCAATCCACTCAGCCTACAGTGTCTTCAGCTCTCCAACTCAGTCACCCCACGCAGCTCGACACAATGCCCTCGGCGCTGGCAGCCCAGTGCCCTCGTCCTCCCTCTCGTTATCCCGCCACAGCTTCAACAATTCCACctcctccctctccctctccctctctcactCCCTGTCGCGAAACAACTCAGACGCCTCCAGCAGCTGCTACAGCTACGGCTCCCTGAGCCCACCCACCCACTCACCAGTGCAACAGCCCAGGCACCCCCACCCCCATCACCACCAGATCCCCCAGGGGAGCCCCCTGCACCTGCCCTCGGGCTCGGCGAGTGCCCACTACTCTAGCCCACCTGATCTGACCAACGACCCCCACAACGACGAGGAGGACTGCAAAATACCCTCTGCACCATCGGGCATATCGACCAGGCAACAGCTCATCAACAGCCCCTGCCCAATATGCGGGGACAAGATAAGCGGCTTTCACTATGGCATTTTCTCGTGTGAGTCATGCAAGGGCTTCTTCAAACGCACTGTCCAGAATAGGAAGAACTACGTCTGCCTCAGGGGGGCTGGCTGTCCTGTCACTGTTGCCACGAGGAAGAAGTGCCCTGCCTGCAGGTTCGACAAGTGTCTCAATATGGGAATGAAGCTCGAGGCCATTCGCGAGGACAGGACTAGGGGTGGGAGGAGCACCTATCAGTGCACTTATACACTTCCAGCTAATCTCATGGGCAGTGCTGGGGGCATGGGGGATAAAGTCAATGCTGGGAACTGCAGTCCAGCTCCGGGGGAGCATCATCACTCGGCGAGACATCACTGGAATCATTCGCATAATAAAATGCAGGTTGTGCCCCAGCTGCTGCAGGATATCATGGATGTCGAGCATCTTTGGCATTATAATGATAATGATCGGGCTGGACAGGGGCAGGGGGGTGCGGGGGGACAGGGGAATGGGCTGGGGGAGTCCCTGGGGATCGCCACTGGGAGCAATGGAAATGTCGAGGGGAGGGGGGAGCCGGGGGGCTCCAGTCCTGGGCATTGTCAGGGGAATTGTCAGGAGCAGACGTCGACGAACGAGGGGACCAATGAGGGGGGCAACTCCAGTGGCAATGGGAACTCACAGCCACCCGACTTTCTGTCGAATTTGTGCAATATCGCTGATCACAGGCTTTATAAGATTGTCAAGTGGTGCAAGAGTCTGCCACTTTTCAAGAATATTTCGATTGATGATCAGATTTGTTTGCTGATTAATTCGTGGTGCGAACTGCTGCTGTTCTCGTGCTGCTTTCGGAGCATGAGCACCCCGGGGGAGATCAGGGTGTCCTTGGGGAAGTCCATTACTCTGGAGCAGGCCAGGCAGCTGGGGCTGGCTACCTGCATTGAGAGGATGCTCGCGTTCACTAATAACTTGAGGAGACTCAGGGTGGATCAGTACGAATACGTTGCGATGAAGGTGATAGTACTATTAACTTCCGACACGAGTGAATTGAAAGAACCCGAGAAGGTCCGCGCCTCCCAGGAGAAGGCACTCCAAGCCCTCCAGCAGTACACGATAGCGAGGTATCCAGAGATGCCAGCGAAATTCGGAGAGCTCCTTCTCCGAATACCCGATCTCCAGAGGACCTGCCAAGCCGGCAAGGAGTTGTTGAGTCAAAAGCGCGCAGAGGGCGAGGGCAGCTCCTTCAATCTACTCATGGAGCTCCTCAGGGGCGACCACTGA
- Protein Sequence
- MSEQNAPTDGPGWWPPAQPWKSSSTSVAGTSVVTRNPETGKNVSVTTINVPPVQDMHDGKSVKYLGGQNGVTVSVVSSCGSSPSPGLNGPEPGSVDDLEESDGEVSKIDFRGVNLRTKKKRDGDPDSVSTADDSHEQPERPMSWEGELSDQEMSSNTLATQEHEETSMEGVQVCSLSPGPQEQKFPIKPEPDYRSSPGTPQGHTDPAMPQAHSQSLQHPQPHPQRDLEPNHQSDLPLLVGKLLGGYSSSTPNHSPILNPRHHLQKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHNALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHPHHHQIPQGSPLHLPSGSASAHYSSPPDLTNDPHNDEEDCKIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLMGSAGGMGDKVNAGNCSPAPGEHHHSARHHWNHSHNKMQVVPQLLQDIMDVEHLWHYNDNDRAGQGQGGAGGQGNGLGESLGIATGSNGNVEGRGEPGGSSPGHCQGNCQEQTSTNEGTNEGGNSSGNGNSQPPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSQKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00351044;
- 90% Identity
- iTF_00438152; iTF_00438111;
- 80% Identity
- iTF_00438152; iTF_00438111;