g79474.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- dsx
- Assembly
- GCA_003013835.2
- Location
- ML017938.1:85005-85613[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1e-24 1.3e-19 72.5 13.4 2 47 25 70 24 70 0.97 2 3 0.87 3.6e+04 -2.6 0.0 31 38 123 130 107 138 0.61 3 3 1.5 6.2e+04 -3.3 0.0 21 27 151 157 143 163 0.57
Sequence Information
- Coding Sequence
- ATGTCAGACTCGCAGGAATTTGAAAATAAGATGGACGTTAACGCATCTAGTACTTCCGTGACTCCAAGAACACCTCCGAATTGCGCTAGGTGTCGGAATCACCGAAAAAAAGTCGCGCTAAAGGGACATAAGCGCTATTGTCCATATCGCTTGTGCAAGTGCGAAAAGTGCAGGTTAACCACAGAACGACAACGAGTTATGGCTATGCAGACAGCGCTCAGAAGAGCACAAGCTCAGGACGAGGCCATGTTAAGGAGCACTTCCACAAATCCAGACGACATGAATATGATTCCTTTGGCTCAACACAGCCCACCTCAAATTACCTCCATGAAGCGACACGTAGACTGTGATTCTTCCGATTCAGATCAACCTCCATGTAAGCTAGTGAAGATGACATCTACTCCTTTAGCGCAACAAAGTCCTCCTATTATAAGTCCATTAAAACGGCGTTTACCAGATTGTGATTATTCTTCTTCCTCTCATTGTGCTGATCAAAACTCCAATAAGGCCATGAAGTTAACTCCAAACAGTGAAATTCCTTCCACCACTGTTAACATCAGTTCAATGAGCGAGTGTCACTCATCTTATTCTGAATTTAATAGAGGTTAG
- Protein Sequence
- MSDSQEFENKMDVNASSTSVTPRTPPNCARCRNHRKKVALKGHKRYCPYRLCKCEKCRLTTERQRVMAMQTALRRAQAQDEAMLRSTSTNPDDMNMIPLAQHSPPQITSMKRHVDCDSSDSDQPPCKLVKMTSTPLAQQSPPIISPLKRRLPDCDYSSSSHCADQNSNKAMKLTPNSEIPSTTVNISSMSECHSSYSEFNRG*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -