g3279.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- dmrta2
- Assembly
- GCA_003013835.2
- Location
- ML015000.1:1538146-1538688[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-28 9.5e-24 85.7 11.4 1 47 37 83 37 83 0.99 2 2 0.3 1.2e+04 -1.1 0.0 32 44 152 164 150 167 0.80
Sequence Information
- Coding Sequence
- ATGAGTATACCCGGTGCTGGAGTGGACATGTCTGCTCTAATGTCTCAACACCCTGTGCTAGGAGCTATCCCCCCGGCTTTCTTTCTAAGAGCCTCCGAGAGATACCAAAGAACCCCTAAATGTGCAAGATGTCGAAATCACGGTGTTGTCTCGGCTTTGAAAGGACACAAAAGATACTGTAGATGGCGGGATTGTAATTGCGCCAAATGTACCTTGATCGCAGAGAGGCAGAGGGTTATGGCCGCTCAGGTGGCTCTCCGGAGGCAGCAAGCTCAGGAAGAAAACGAGGCTAGAGAGTTAGGGATCCTCTTTCCCACGCCGATGACCCAGTCCGTTGGGGAGACCCCTGTACCTCCTCCGCCAGTATCCAACGCATCTGATATGGGGATGGCTCCTGTTTTACAAAGAAGTACCTTCACCACGGCGTCTGATTCTTCAGAGGCTTCTAGTCCAAGTAAgtgtttatttattaatcaaaatAGAAACATATCAGTGGCAAACTTTGGTAATGAATCACATCAAAACACGATTGTATCACTTTAA
- Protein Sequence
- MSIPGAGVDMSALMSQHPVLGAIPPAFFLRASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCNCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGILFPTPMTQSVGETPVPPPPVSNASDMGMAPVLQRSTFTTASDSSEASSPSKCLFINQNRNISVANFGNESHQNTIVSL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01310548;
- 90% Identity
- -
- 80% Identity
- -