g64113.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- Baz2b
- Assembly
- GCA_003013835.2
- Location
- ML016668.1:186712-259766[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-12 2.8e-07 32.7 0.0 14 73 260 320 255 324 0.88 2 2 0.45 1.4e+04 -1.5 0.0 51 73 339 361 331 364 0.81
Sequence Information
- Coding Sequence
- ATGAAGCAAGTCGCTTATGATCCTAATTCTATTTTGGGCGGTGTTAGGTTACCACCTGACACGGAAATAATCAAGTACACATCATCTATAGTCGGACCGAAAGTACCTGGTACTACAAATCGAGGAAGAAAGAAGACTATCAGTCTCGATCCGCCGTTCGTCAGCCTGCATCCTTCACTACAGCTTGGCCCAGAAGGACTTATGCAAGCAATGGTTAAAAAAAACAGTTcaaatGGGCAAGATATTACTCCTCCTTCTACACCACCGACAGACAAAGTGGAGGAGAAGAGGGCTACGAATGGAAACATATCGGATATGGCAGCCAGTTATGATGGTACAGAATCGACAGGAGAAACACCATTAAATCTGTCGGTCAAACCTACTATGGATAACTCTAGTGTCAATTCACTGGCATCGTTGAGCAATATTTCATCAAGTGTTGGAACAGACAGAATATCTCGAAGAAAACCTGGTCCCAAGCCAAGACGGATCATTACCTCCGGAAACCAAATGTCTTCATCTTCAAGCAATTTCTATTCCCACCTATTCTCCCCAGTTGATTCTCCAAGACCACCAAGTAGAAACGAAGGCTCCGACGGGGGTAGCTCGACGTCTTCGACATGTACCACCTCTGCCACGATATCTGCAAGCGGTACGCCAATATCTCCGGGCCTGAGTTATAGTCAAAAGGAAGGAAGGCCTAGGAACTTGGGAAGAGGAATTAGTAAACCGAAAAAGAATACTGTAGCGTCGTTATTAGCACAGAGTAGAGCATTAGGTTGGAAACGAGAAACAATCATTAGAGGTTTAACAAAAAACGGAAATCTAAAGGGAGATGTTACATATACAGCCCCAGATTCATCgaataaatttaaacaaatgtCAGATATTTCACAGTATTTGGAATACCAGAAAAGTTTGGATCTTTCAAAAGATAATTTTACCTTCAGCTGTCGAATAATATTAGGGGATTATCTACAACCTGTTCCTACAGAAATTCAGTTGGAAGGGAACGAATTTATTCGATTGACAGAAGAAGACATGAACAAAAGGCTTGAAGAATTTTCATTTTCAATGAGGACAAGTATTCCAGTTGAACAGAGAATCGAGTTGGCGAGAAAGCAGCAAGCAGCCAGAGAAGCAGCGCGACAAGACAAAGAGCAGACTAAGTTAGCGCAAGCGCAAGAGAACGAGTATTTTGACAGGCAAGAACAAATAAAATTCGAAAAGGAAATTAAACATCCACCAATGATAGAGGTAACGAAATACCTTTCAATAGATGAAAAGGTTGCCAATGAACGAGAGAGAAAACGCCAGCACATGATCCTCATAAAAACATTGGAAAACAGACGTAAACTGGAAGCAAGAGAACGCAAAAAGCAACAACTTCTCGCAGAAAAGCAAGCAAACAAGGAGAAGAAACTTGAGCAAAGGAAACAAGAATTGGAGATCCTGACTGAAATTAGAAAACCGTGTGAAGATTTGGAAATTGATCAGACGTTTTTACCAGAATACCAGCGAATACCTGGACTGAAATTGTCAGCAAAAGCATTCGGCGATCTTCTTATGGTATTCGAATTTCTGCACAATTTCGGGGAAACTCTTGGTTTCGACATGGAATCTTTACCAACTTTAAATTCTCTTCAGAACGCTTTACTACCTAGCAAAATGTCGACCGAATACGAAGACGAGCTATTTTCAATAATGACTCATCTGCTAGTTTGTGCTATCGAAGATCCAGGAATACCTAATCCAGCAAGATACACAACAAGTCTAGGTCAAAGTTTGAGGCAAGCTGATATAACTCCTTCGAATATATCCGAAATTTTAAGGATATATTTGTACGCCAATGCAACTGGGGAGATTAAGGCTTTAACTGGAATTCATTTCGAAAGAGAACGTGAAAAGAGAATTGCAGATCATCATCAACTTGAGGACGAGATGGTTGTAACTCAGACTGGAAAGAATGCGCAATATTATGAACAATTACACAGCAATCAGACATACAAGTTATCAGATTTGTTGAAAACCCGGCCGTTTATGAGTCTTTGTCCTACGACTAAGGCTGAAATTCTGGCGTATATTTGTAATGAATTGCTTCAGAATAAGGCCGTTATCAGACAGATCGAAAATTCTTTGGAAACTGTGATACAACAGAAAAAAGAGAAGTGgttgctcgacatgaaaattaGGAAAATCTCTGCAGGATGGTGGAAAGTGGACAGTCTCCTCCCCATCATATCCCACACATGTTCGATAGGATTTAAACCTAGTGAACGGGGTAGCCACGGTAAAAAATTAACTCCAGCTTCTTTGACTAAGTCCATAGTTCGACGAGCAACATGGGGACGCGCGTTGTCTTCCAGAAAAGGGGGTTTCGACAGCCATTTAGATAAGACAGTAAAGTGGTTTgAGGAAGATAACAAACTATCTCCTGAAGAACTGGGAAAGAAACTGGAAAAATTCATAAAAACATCTGAAATTCACTTAAGTACTATAAAGGCAGCTAGCTTACAGTTGCGAGCTATCTGCTACGGACAAGATAGGTACTATCGAAGATACTGGTCGCTGCCCAAAGCAGGTGGGATATTCGTGGAAGCAGTAGAAAGCGCGGATCCAGATAAAGCAAGAGAACAAATGTGCCCAGATAATTCCGAACTTGGCAGTGATGGTGTCCAAGGTTTAAGCGATTTCGATAATTTGAGTCAAAAGGAAGAGGAGGATGATATGGGTATAGACGAAGAGATTAATAGAATCATGGCAGGAAGTGAGGATGACAACGATTCTAGATTAGCAAAATACGGCGAAGAATATGATAGAAAACCAAATAGAATCTTTGAAAACGGAGATGTTAATATCAAATCCGAACCCAATGTAAAAGATACTCAGAGGATAAAAGAGGAAATTGGAGATATGGCCGAGAAACATACAAATAGTGATATAGAAACAACTGAAAGTAATGAAGGATTTAATAATACTACAGAGGAGTACgacaattttagtaataagccTTTCAGTCTCTTCGAGAGGCTAGGCCAATGTGTAGAACGTGAGAATAAGACTGAGGAGGATTTAAAAATGGAAGTAAAAGCTGAAGTAAAGGaagaattaaaaaatgaaatcCTGAACGAACTAAAAGCAGATATAAAACACGAATACTCGGTAGAATCGAATCACGAAAACGACGAAGAACATGAACACAAATGGTTCAGCATATTAAGTTCTGACACGACGTCTTGTGATGAGATCAATCTCAGTTCGGGCGCTAGATGGGAAAACGGAATCGGAGCTTGCACGAAGGACATCATGGAGCTTAAAATTCCAGTTTTTCCCCCGCCAAATTCTGACGCTTCTGCTTACACAAACTGTGATAGTCCGACGCCTCTTCAGTTGACGCCTGAAGAAAGTTTTCAATTGGAGTATATCCGGAAGCACGGAACTATTAAGTGTACTCAGAAAAAGAGCATTCCAACTAAAATGAGGTATGGATGGTGGCGTATATTCGATGCAACACAACTCAGAGAAATTTTAGACAATCTACAAATAAGGGGAATACGCGAGAGAGAATTGAAGAGGAATTTCATAAATATTATGCAGGCGATGTACGATAAGAAAGGAAGACTAGTTATAGAAGAGGGGAGTCGGGATTTGACTGCTTTGAACGAGGAACCTGTAGATGGAATCAAATATATCGAAGAGAGTGCTCCTGAACCCGAACATTTTAACGCTTACAGTATTGAAATGGAACAAAGGATAGACATGTTTTTATTGGAGCAGATTGAAACATTGGAAGATAAAGTAGCTAACGCTAGCATGCAGACGAAGGGTTGGAAGCTGCCGTGTCGAGATTTGAATGACCCATCACACGATGAATTTATCGTTCTTGCAAAGAACAGACTGGCATCTTTGGAGATGAATATTGAGAGAAGATATTTAAAGCCACCTTTAGGAGTCAgTACTGGTGATCCCCATTTAGCGACGCTTAGCCAAGAATCCTCGTCTTCCACCACTTTAACCACTCAACTAAATTCTGACGAAATACCTAAAGGATTGGCTACATGGAGAGACGCTGTGCATCGCAGTTTGACGACGGCTCAATTATCAATGTGTCTCTATTCATTAGAAGCTTGCATAGCTGGTGATAACGAAGATAAACTGTTACTCTGTGATGGCTGCGATAAAGGTTATCACACCTACTGCTTCAAACCTAAGATGGATACTATCCCAGAAGGAGATTGGTACTGCACCGAATGTTTAAATAAAGCTACTGGAGATCGTAACTGTCTCGTTTGTAGCAAGAAAATCTCGATGACTGGTTCAAAGCTAGTGTTGTGCGAATTGTGTCCTCGAGCGTATCACACCGATTGCATTCAGCCCAACCTACCCAAGATTCCTCGGGGTAAATATTACTGTTTAAATTGCATTTCGAAGAAGCCTCAAAAGAAACCAGTCAAAAAGCCTCCTAAACCGAAAGAGCAAGAAGTACCAGAACCAGTTCAGACACCAGCCAGCCCTACTCCATCCCACAGTTCCATGACAACGACAACTGAAGATATATCAGTATTAAATAGTTCTCAAAGTGACACGTCGTCGACAAACGTACTGAACGTCTCTTTAGAGTCTCCATCCACtccaaatcacaacaaaaaagaTAGGAACAAGAAACTAGCAAAAGAATTCGCACCGTGTAAAACGTTACTGGAAGATCTGGAATGCCACGACGATGCTTGGCCGTTTTTACTGCCTGTTAACACTAAACAATTTCCTACGTACAAGAAGATTATCAAGATTCCGATGGATTTGTCAACTATCAAGAAGAGATTGCAAGACCAACAGTACAAATCAAGAGAAGATTTCTGTGTAGACGTGAGGCAAATCTTCAACAATTGTGAAACGTTCAACGAGGATGACAGCCCAGTGGGCAAAGCAGGCCACGCCATGAGACAGTTCTTCGAAGCCAGATGGAACGAACTAACCTTGAACAGTTGA
- Protein Sequence
- MKQVAYDPNSILGGVRLPPDTEIIKYTSSIVGPKVPGTTNRGRKKTISLDPPFVSLHPSLQLGPEGLMQAMVKKNSSNGQDITPPSTPPTDKVEEKRATNGNISDMAASYDGTESTGETPLNLSVKPTMDNSSVNSLASLSNISSSVGTDRISRRKPGPKPRRIITSGNQMSSSSSNFYSHLFSPVDSPRPPSRNEGSDGGSSTSSTCTTSATISASGTPISPGLSYSQKEGRPRNLGRGISKPKKNTVASLLAQSRALGWKRETIIRGLTKNGNLKGDVTYTAPDSSNKFKQMSDISQYLEYQKSLDLSKDNFTFSCRIILGDYLQPVPTEIQLEGNEFIRLTEEDMNKRLEEFSFSMRTSIPVEQRIELARKQQAAREAARQDKEQTKLAQAQENEYFDRQEQIKFEKEIKHPPMIEVTKYLSIDEKVANERERKRQHMILIKTLENRRKLEARERKKQQLLAEKQANKEKKLEQRKQELEILTEIRKPCEDLEIDQTFLPEYQRIPGLKLSAKAFGDLLMVFEFLHNFGETLGFDMESLPTLNSLQNALLPSKMSTEYEDELFSIMTHLLVCAIEDPGIPNPARYTTSLGQSLRQADITPSNISEILRIYLYANATGEIKALTGIHFEREREKRIADHHQLEDEMVVTQTGKNAQYYEQLHSNQTYKLSDLLKTRPFMSLCPTTKAEILAYICNELLQNKAVIRQIENSLETVIQQKKEKWLLDMKIRKISAGWWKVDSLLPIISHTCSIGFKPSERGSHGKKLTPASLTKSIVRRATWGRALSSRKGGFDSHLDKTVKWFEEDNKLSPEELGKKLEKFIKTSEIHLSTIKAASLQLRAICYGQDRYYRRYWSLPKAGGIFVEAVESADPDKAREQMCPDNSELGSDGVQGLSDFDNLSQKEEEDDMGIDEEINRIMAGSEDDNDSRLAKYGEEYDRKPNRIFENGDVNIKSEPNVKDTQRIKEEIGDMAEKHTNSDIETTESNEGFNNTTEEYDNFSNKPFSLFERLGQCVERENKTEEDLKMEVKAEVKEELKNEILNELKADIKHEYSVESNHENDEEHEHKWFSILSSDTTSCDEINLSSGARWENGIGACTKDIMELKIPVFPPPNSDASAYTNCDSPTPLQLTPEESFQLEYIRKHGTIKCTQKKSIPTKMRYGWWRIFDATQLREILDNLQIRGIRERELKRNFINIMQAMYDKKGRLVIEEGSRDLTALNEEPVDGIKYIEESAPEPEHFNAYSIEMEQRIDMFLLEQIETLEDKVANASMQTKGWKLPCRDLNDPSHDEFIVLAKNRLASLEMNIERRYLKPPLGVSTGDPHLATLSQESSSSTTLTTQLNSDEIPKGLATWRDAVHRSLTTAQLSMCLYSLEACIAGDNEDKLLLCDGCDKGYHTYCFKPKMDTIPEGDWYCTECLNKATGDRNCLVCSKKISMTGSKLVLCELCPRAYHTDCIQPNLPKIPRGKYYCLNCISKKPQKKPVKKPPKPKEQEVPEPVQTPASPTPSHSSMTTTTEDISVLNSSQSDTSSTNVLNVSLESPSTPNHNKKDRNKKLAKEFAPCKTLLEDLECHDDAWPFLLPVNTKQFPTYKKIIKIPMDLSTIKKRLQDQQYKSREDFCVDVRQIFNNCETFNEDDSPVGKAGHAMRQFFEARWNELTLNS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -