Dcan025375.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dexiosoma caninum
Gene Symbol
-
Assembly
GCA_963924685.1
Location
OZ004729.1:81310336-81314296[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.00011 0.0085 17.2 1.6 1 23 335 357 335 357 0.93
2 9 1.8e-08 1.4e-06 29.1 2.4 1 23 363 385 363 385 0.98
3 9 0.00027 0.022 15.9 0.5 1 23 391 413 391 413 0.98
4 9 7.7e-06 0.00062 20.8 1.0 1 23 419 441 419 441 0.97
5 9 3.8e-05 0.0031 18.6 1.4 2 23 528 549 527 549 0.96
6 9 4e-09 3.2e-07 31.1 1.6 1 23 555 577 555 577 0.98
7 9 0.0025 0.2 12.9 0.7 3 23 585 605 583 605 0.98
8 9 0.0002 0.016 16.4 0.8 1 23 611 633 611 633 0.99
9 9 0.022 1.7 9.9 1.1 1 23 640 664 640 664 0.95

Sequence Information

Coding Sequence
ATGGCTATAAACTTTTCCGCTTCTTTTGCGGCCTGTATAGCAGCCGGCCTCAAAGTGCCGCGCCAGATTATGTACTGTATAACTCAGGACACAGGACAGCCTTATGTGCTCTACAAAGACTCGCAAGAGGCCGAGAGAAATGCTGCTGCTATTGGCGGTTCGGCAACTCAATGGGGTAGTGAAATGTACCCGGGCATACAGCAACAGGCTCAAACACATTTAAGcgcacaacagcaacaacaaaatgcagCTGCGCAAATTGCCAATGGGCAATCAGCGGCCGCAAATGGACCACAGCCTACATCTCCAAATGGCGATCACAATGTTCGAGAAAATGGTGGAGATGGTGGTGGAGGGACGGGCGGTGCGGGTGGTGTACGACAGCAAGGTTCGCCATCGACGAGCCCTTATCCCCCACAACAGCAGCAGAGAGCGAATGGCGGCAATGAGGATGATGTTAATATGAATCAGGCATCTGGTCTTCAACATCAGAATCCCAGCCAACAAACCAATCCAAACCAAAGCTCAAATGATCCCCAACAGCATCAGCAGCAAAACGGTAGTGCTGGTGGTTCAGCCGACAATCCGGCGGGGAATAATCCACATGTACAACAAAATGGCCAAACCAACGATCACAGTAATTTTCCTACAACAAACGGTGAACTATCAGGTTACTATGCTCCAAGGCATCCAGGCCAAGGGGCTCTAATGGCACCTCCCGGTTTCCCACCACTGCACTATCTTAACAAGCCAGTTTTGCCAGGTCTTAACGGCAGCATGGATCAAAATTCAACCAATGGTCCTTCTAATGGTCTAGAGGGTTACGCACTGCCCGAACTCTTACCGGGACAAAATGGCTCGGCCAATAGTAATCAACAGAATAGCTCTAATCACAATGCAGCAAACACGAATGGCTCCGGCGGACGTCATCCCACCTCTAGCAGCAATAATAACTCGTCTGGCAGTCATAAACCTCCAAAGCCTCACAGTGATCTAAGGCTGTTCAAGTGTTTGACATGTGGCAAAGATTTTAAACAGAAAAGTACCCTGCTTCAACATGATCGTATACATACAGATGCTCGACCGTATCCTTGTTCGGAGTGCGGCAAACGCTTTCGGCAGCAATCACATTTGACGCAACATTTGCGCATACACGCCAATGAAAAGCCGTTTACTTGCGGTTACTGCAATAGAGGCTTTCGACAGCGGGCGATACTAAATCAGCATGTTCGCATCCATTCGGGTGAGAAGCCCTTTGCGTGTCCCGAGTGCGGCAAGCACTTTCGCCAGAAGGCCATCCTTAATCAACATGTGCGAACCCACCAAGATGTTTCACCGCATCTTATCTTTAAAAATGGTCCGCATCCCACACTGTGGCCCCAGGATGTACCTTTTCCAGGCGAAGAGAATGATACCAAAAATGGTATTGCCGGCGATGGTTATCACGACGAGGACTCTCAAGGTGGCCAAGATGGTGGTATACACTATCCTGCATATTTTAAAGATGGTAAAGGTCAAAAAATCTTACCAGATGTTTTGTCGCACATTGGCATCCGTCCAGCTAATATGCCACTATATGTACGTTGCCCCATTTGTGATAAGGAGTTCAAACAAAAGACCACACTTCTACAGCATGGTTGCATACATATCGAATCGCGTCCTTATCCTTGTCCCGAGTGCGGTAAACGTTTCCGTCAGCAGTCTCATTTGACACAACATTTACGAATACATACCAATGAAAAACCATTCGGTTGTCTTTACTGTCCGCGTTTCTTCCGTCAGAGAACCATATTGAATCAGCACATTCGTATACATACCGGAGAAAAACCGTATAAATGTGCCCAATGTGGTAAAGATTTCCGTCAAAAGGCCATTTTGGATCAGCATACACGGACGCACCAGGTAGGTGATCGTCCTTTCTGCTGCCCCATGCCAAACTGCCGTCGACGTTTTGCAACCGAAAACGAAGTAACGAAACATATTGACAACCACATGAATCCGAGTGCGACAAAGACACGGCGGGCAAATAATACTAATACCAATACAACACACTCAGCGGCCGCAGTGGCGACAGCAGCAGCTGCTGCCGCGGCCAATCATTTAATGAATGAAACCAAAAATGCAGCAGCACAACAGTTTCTAAACAACAACAATCCTGTCCCGCAGCCtggagaaaacaaaaacaatatactGCCGCGTTCAATGGGAGGTGGGGGAGCAAATACAGGATCGCAAGTGAAAAATGAACTGTATTTTCCTCAATGTTATGGACCACCATTCCAGCATCCCTTTCAGGGCCAGCCTCAAGCAGCCCATGCAGGTGCCGTACAACCACCCGTATCGGTAAGCGTAGCGAACTCAGTAGCACCAGGTGTTGTGGTGCAGCAAAATGCTGGTAGCTCGGTAGTGGCTCAGTGA
Protein Sequence
MAINFSASFAACIAAGLKVPRQIMYCITQDTGQPYVLYKDSQEAERNAAAIGGSATQWGSEMYPGIQQQAQTHLSAQQQQQNAAAQIANGQSAAANGPQPTSPNGDHNVRENGGDGGGGTGGAGGVRQQGSPSTSPYPPQQQQRANGGNEDDVNMNQASGLQHQNPSQQTNPNQSSNDPQQHQQQNGSAGGSADNPAGNNPHVQQNGQTNDHSNFPTTNGELSGYYAPRHPGQGALMAPPGFPPLHYLNKPVLPGLNGSMDQNSTNGPSNGLEGYALPELLPGQNGSANSNQQNSSNHNAANTNGSGGRHPTSSSNNNSSGSHKPPKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPYPCSECGKRFRQQSHLTQHLRIHANEKPFTCGYCNRGFRQRAILNQHVRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPQDVPFPGEENDTKNGIAGDGYHDEDSQGGQDGGIHYPAYFKDGKGQKILPDVLSHIGIRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCLYCPRFFRQRTILNQHIRIHTGEKPYKCAQCGKDFRQKAILDQHTRTHQVGDRPFCCPMPNCRRRFATENEVTKHIDNHMNPSATKTRRANNTNTNTTHSAAAVATAAAAAAANHLMNETKNAAAQQFLNNNNPVPQPGENKNNILPRSMGGGGANTGSQVKNELYFPQCYGPPFQHPFQGQPQAAHAGAVQPPVSVSVANSVAPGVVVQQNAGSSVVAQ