Basic Information

Insect: Dexiosoma caninum
Gene Symbol: -
Assembly: GCA_963924685.1
Location: OZ004726.1:59785021-59788422[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0026 0.21 12.8 0.9 1 23 124 147 124 147 0.97

2 13 7.1e-05 0.0057 17.8 1.4 2 23 153 175 152 175 0.97

3 13 7e-07 5.6e-05 24.1 4.2 1 23 184 207 184 207 0.98

4 13 6.4e-06 0.00051 21.1 5.0 2 23 441 462 441 462 0.98

5 13 1.2e-06 9.9e-05 23.3 3.2 1 23 468 491 468 491 0.96

6 13 0.00016 0.012 16.7 2.1 1 23 496 519 496 519 0.98

7 13 2.4e-05 0.0019 19.3 2.3 1 23 530 552 530 552 0.95

8 13 0.0042 0.34 12.2 2.3 1 23 557 580 557 580 0.97

9 13 2.9e-05 0.0024 19.0 0.8 1 23 586 608 586 608 0.96

10 13 0.00013 0.011 16.9 1.9 1 23 614 636 614 636 0.98

11 13 6.8e-07 5.5e-05 24.1 1.6 3 23 644 664 643 664 0.99

12 13 4.8e-07 3.8e-05 24.6 0.3 1 23 670 692 670 692 0.99

13 13 0.0025 0.2 12.9 0.2 1 23 697 720 697 720 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0026	0.21	12.8	0.9	1	23	124	147	124	147	0.97
2	13	7.1e-05	0.0057	17.8	1.4	2	23	153	175	152	175	0.97
3	13	7e-07	5.6e-05	24.1	4.2	1	23	184	207	184	207	0.98
4	13	6.4e-06	0.00051	21.1	5.0	2	23	441	462	441	462	0.98
5	13	1.2e-06	9.9e-05	23.3	3.2	1	23	468	491	468	491	0.96
6	13	0.00016	0.012	16.7	2.1	1	23	496	519	496	519	0.98
7	13	2.4e-05	0.0019	19.3	2.3	1	23	530	552	530	552	0.95
8	13	0.0042	0.34	12.2	2.3	1	23	557	580	557	580	0.97
9	13	2.9e-05	0.0024	19.0	0.8	1	23	586	608	586	608	0.96
10	13	0.00013	0.011	16.9	1.9	1	23	614	636	614	636	0.98
11	13	6.8e-07	5.5e-05	24.1	1.6	3	23	644	664	643	664	0.99
12	13	4.8e-07	3.8e-05	24.6	0.3	1	23	670	692	670	692	0.99
13	13	0.0025	0.2	12.9	0.2	1	23	697	720	697	720	0.98

Sequence Information

Coding Sequence: atggAAGCAGATACAAGTTTTAATAAAAGCGAGATTTGCCGTATTTGCATGCAGAATGATGCTAATTTGTTTTCCATATTTAATGAAGTATTCTGCGGCAACAAAACTATTACAATGGCTGAAATTATATCAGAATGTACTAAGTATCCAGTAGCACATAATGATCAGCTACCTGCACAAATATGCAATGGCTGCATGGAAGCCGCTCAGCATgcccataaatttaaaaatcagacGGAAGATGCTTATTGTCAACTGAAGGCGTTGTATGATATAACTTGGGTCCCGAAACATGAGAAGGGTGGTAGTGTTATTAGGGTGAGTGCCCTCACTACAGACAAGTATACACAAACTGAAAAAACCAGTGTGTTTCAGTGTGAGAGttgccaaaaaaagttttttgtggaACGTGACTTAAGAGAACATCGTGCCACTATTCATGTTAATGACGGCAAAAAATGCCGAGTATGTGGCGAAACGTTTAACCATTTGGGTCAATTAAAGATTCATTTATCAACAGAACATCCGAGCGAAGGAATACGTTGTGAATTCAAATGTAACATCTGCTCGAGAGAATTTACTCGTAAAGATCACTTGAAAAGACATTTAAATCGAGTACATAAGGTCGAAgatgataaattaaatatATCTAAAGTAATACTTGATGAACCTGAAATTGAAACACCCACAGTACTGTCCGCTAGTTTAAATAATTACAGTAGTCATTGGCCAGATTATCAAGAGGAAGATGACAATGTACCAATTGCAAATAGGAATAGAACTAATGAAACAATTGCCGCTACGAATCCATTCTCGAGTGAGGATGAGAGACAGGATCATCATGAATTTAATGATATGGAAGAAGAAGATGTAAAACAATTTGTGGAAACTATATCCCATCCAGAAATATCAATTAAAGTTGAAAACTCTGACATCAGTTACAACATTTCAAATCACAAAATCCCAAAAGTTGTTAAATCTGTCAACCCTTCATCTGAAGAAATGAAATCGCACTTATCGTCACTTAATTTGGGAAAAGCTAGTGATAATTTAgagttagaaaaaaattacgatacCGAATATAAAAGTAATATAAGAAATGATGACGAACATAGCAATAATAATTCCAGCGAAGATATGTCCTACGAAGAAttcgatgatgatgatgattacgACGTTAATAATTTGGAAACCAATAAAAGGACTAATAAATTGGTAATGAAAACTTATGTAaaacaagagcaaactgatgtACAAATTGAAAATCCAACAAGTTCAAAGTCACCAAGACGTCGCCATGCATCCAAAACCGATGATAATCGTTGTAAGGAGTGTAATCGCACATTTACTCGCTATAATCATTTGCTGCGACATATGCTTACACATAGTGATGAAAAGCctcatatttgtagtttttgtgGTAAAGGATTTTCACGTTCGGATCATTTGCAAAAACATATACAAAGTATACACTGCGAAAAGAATTATAAATGTGATCAGTGCTCCAGCGCTTACGGTCGCAAGGATCATTTGCAAAGACATATTGAAACAAGGCATAACAAAGATCCTTCGGTACAAAAGCCGCAATTTGATTGTAATATGTGCGATAAAAAGTTTACCACTAAAGCTTACTTGTCAAAACATAAACTCCTGCATACCAACAGTCTTTACGCATGTAAACATTGTTCAGAAACTTTTCAAGAAAAGGATTTAGTGAAGGAACATCAAAAGAAAGAACATACTCAACCACGTAATTTCCTGTGCAATATTTGCGGAGATTCGTTTCAAAGAAATGAATATCTCAAAATCCATATGCGGCGTCATACGGGCGAGAAACCGTATAAATGTCGTTTTTGTGAAAAAGGTTTTCCACGTAGTACAGATTTAAAAATGCACGAAAGATATCATATGGGACATAAACCAAATCTATGCAATTTATGCGGTAAAGGTTTTCATCGTCCCTACAATCTTACAATACATATGCGTACCCACACTGGAGAAAAGCCTTACAAATGTAACCAATGCCCTCAAGCGTTTGCTCAAAGCAACGACCTGAAAGCCCATATAAGACGTCATACAGGAGAACGATTTCGTTGTGATTTATGTAGTGCTGCGTTCTTGCAACGTTATGGTTTAAATGCTCACTTAAGGACAGTACACGGTATAATAGTTACTTCGTTTACCGGACGTTTGCGTAAAACTGACCAGCCTCTTGATGAGCTACTTGACCAACAAATATCAGGGGCGAACCCACCGACAGATATAGCTGTCCAACAGCAGTCTCAATGTTCTCTGCCTTCACCTCCTTTAGATAGTAAAGTTACACCTCCGCCTTTATATTTAGCTCATCCGTTTATTAATCCAATACCAGTTGTTGCTCCCACTACACCAACATCGCCCATTAACATTTCATCCACAAGTACGCCATCGTTGCCCCTTCCGTTACCACATTCATCCTCGCAACAGATATAA
Protein Sequence: MEADTSFNKSEICRICMQNDANLFSIFNEVFCGNKTITMAEIISECTKYPVAHNDQLPAQICNGCMEAAQHAHKFKNQTEDAYCQLKALYDITWVPKHEKGGSVIRVSALTTDKYTQTEKTSVFQCESCQKKFFVERDLREHRATIHVNDGKKCRVCGETFNHLGQLKIHLSTEHPSEGIRCEFKCNICSREFTRKDHLKRHLNRVHKVEDDKLNISKVILDEPEIETPTVLSASLNNYSSHWPDYQEEDDNVPIANRNRTNETIAATNPFSSEDERQDHHEFNDMEEEDVKQFVETISHPEISIKVENSDISYNISNHKIPKVVKSVNPSSEEMKSHLSSLNLGKASDNLELEKNYDTEYKSNIRNDDEHSNNNSSEDMSYEEFDDDDDYDVNNLETNKRTNKLVMKTYVKQEQTDVQIENPTSSKSPRRRHASKTDDNRCKECNRTFTRYNHLLRHMLTHSDEKPHICSFCGKGFSRSDHLQKHIQSIHCEKNYKCDQCSSAYGRKDHLQRHIETRHNKDPSVQKPQFDCNMCDKKFTTKAYLSKHKLLHTNSLYACKHCSETFQEKDLVKEHQKKEHTQPRNFLCNICGDSFQRNEYLKIHMRRHTGEKPYKCRFCEKGFPRSTDLKMHERYHMGHKPNLCNLCGKGFHRPYNLTIHMRTHTGEKPYKCNQCPQAFAQSNDLKAHIRRHTGERFRCDLCSAAFLQRYGLNAHLRTVHGIIVTSFTGRLRKTDQPLDELLDQQISGANPPTDIAVQQQSQCSLPSPPLDSKVTPPPLYLAHPFINPIPVVAPTTPTSPINISSTSTPSLPLPLPHSSSQQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00742112;
90% Identity: -
80% Identity: -