Dcan016054.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dexiosoma caninum
Gene Symbol
-
Assembly
GCA_963924685.1
Location
OZ004727.1:92208436-92217817[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 8e-06 0.00064 20.8 1.3 1 23 474 496 474 496 0.97
2 18 0.00015 0.012 16.7 0.5 1 23 502 524 502 524 0.97
3 18 6.8e-05 0.0054 17.8 0.6 1 23 530 552 530 552 0.98
4 18 5.1e-06 0.00041 21.4 3.0 1 23 558 580 558 580 0.97
5 18 6.8e-05 0.0054 17.8 4.7 1 23 586 608 586 608 0.99
6 18 0.00012 0.0095 17.1 5.6 1 23 614 636 614 636 0.97
7 18 5.8e-07 4.7e-05 24.3 4.3 1 23 642 664 642 664 0.98
8 18 2.2e-07 1.7e-05 25.7 2.4 1 23 670 692 670 692 0.97
9 18 0.00013 0.01 17.0 6.7 1 23 698 720 698 720 0.97
10 18 0.00021 0.017 16.3 6.6 1 23 726 748 726 748 0.98
11 18 2e-05 0.0016 19.5 4.5 1 23 754 776 754 776 0.98
12 18 7.4e-05 0.0059 17.7 8.3 1 23 782 804 782 804 0.98
13 18 2.1e-05 0.0016 19.5 8.6 1 23 810 832 810 832 0.97
14 18 1.3e-06 0.0001 23.2 7.7 1 23 838 860 838 860 0.98
15 18 0.00041 0.033 15.4 9.5 1 23 866 889 866 889 0.95
16 18 0.00026 0.021 16.0 0.4 1 23 895 917 895 917 0.97
17 18 0.0005 0.04 15.1 4.5 1 23 927 949 927 949 0.98
18 18 1.8e-05 0.0014 19.6 1.6 1 23 955 978 955 978 0.96

Sequence Information

Coding Sequence
ATGTTGCAGTCGCGAGATATATTAGCTGTTGTGCAACCACTAAATCAAGCATCCCACCAATACATGTCGACTACAAACGTCATTAATGCTGATGATGGCTCGAAGACGACAACTGCGTCTGCTATTGTTGCTGAACATAAAAATGTTATGGCCCAACAACCAACTGTAGCTTCAACAAATTCCAATACGAGTTTACCAACAACTGATGATGTAAGTTCCACTCAAGTCGATGTACACATGAGCACTACGTTAGTGTCTGGACATGAACCACAATTGCTaagtcatcatcatcatcagcagcagcaacatATCCACCACGCAAACCCCGTTGCAGGTCCTACTTTGCTGCTAAGTAGTTCTGGCCCTACAACCTCAATACCAACCACAGGAACACTTTTAGCCAATAATCCACAAAATTTGGGTAAATATTGGGTCGTGACAAACTTGTTTCAGGGAGCGCCTGGTCCGACGACTCAATATAACGAGAGTGGTGCAACTCACACCCAGACATCTATAGCAGGAGTGCCTTCATCGACATTAGTGCGTACTATATCCACAACTGCGGCTAGCACAGCAGTTGTAGCTAAAACTGAAGTAGATTCTAGCAGTGCAGGAACACTGCAAATACCACAAGCCCAAATGCTATCACAGGCGGGTATTACACAACAATTGCCAAACGGCACCATTATTACAACACAATCACAGCAGCAAAGACATGGAACAGATCATCAGCAACATCAGCATGTACACGCAGAGGATAATCATCATCAACAACATATAGGTCAACACCAACATGTTGCTGTACTACAGTCAAGCGATGCCATAAAAGATGAAAAACCTTTTGTTACAAATGGCAAGTTGTCCACAGCAAATCAAGATCTAATAATGCAGCATATATCAACAGCAGCATCTTCTGGAAACCCGTCTACCTCGGGTGGTGCAACTATTACACTAGGTACTCCTAAAACAGAAATTAAAGACGATGGCAGTGTAGGCATGGGCGGAAAACTACACCCCGGCATTGAAATGTATAAAGTTAATATCGAAGATATATCGCAACTATTTACCTATCATGAAGTGTTCGGTAAACTACATGGCGACGTGATGAATCATCAACTGTCTGCACCAGCAACAGCTGTGTCTGCAACCTCTTCCAGTGCGACTGAAGGAAGTAACACAAGTGGAGTTGCTGTGATAGCAAACAGTGTTGCTATGACGGAATCAAACAGTACCAGTTCAGGTTGTATCACCAGTACAGCCATTGTTACAAATTCTAATACTGCAGCAACTGCAACTTCGACAACTACAGGTATGGCCCCTGGTGGCTTATTAATGCCAAAAATGGAGGGTGGCATTACTAATGTAGACCAAAATACTGTTACGTTAGCGCCAGATGGTACAGTAGTTTCAACTGGTGAGCATGTGTGCGATATATGCGGAAAAATGTTTGCCTTTCGCTATCAATTAATAGTACATCGCCGCTATCACACCGAACGCAAACCTTTTAATTGTCAAGTATGCGGACAAGGTTTTTTCACTTCTCAGGACCTTACCCGGCATGGAAAAATTCATATTGGTGGGCCCATGTTTACCTGTCTAGtgtgttttaatgtttttgccAACAATGCCTCTTTGGAACGTCATATGAAACGACATTCAACAGATAAACCCTTTGCTTGTACAATATGTCAAAAGACTTTTGCCCGCAAGGAACATTTGGAGAATCATTTTCGTTCGCACACTGGTGAGACCCCATTCCGATGTCAATATTGTGCTAAAACTTTCACTCGTAAAGAGCACATGGTAAATCACGTTCGTAAACATACTGGAGAGACCCCACATCGTTgtgaaatttgcaaaaaatcatTTACGCGCAAAGAGCATTATGTCAATCACTATATGTGGCATACTGGTCAAACACCACATCAATGTGAAGTATGTGGTAAAAAATATACACGCAAAGAACATCTAGCAAATCATATGCGATCGCACACAAATGATACGCCGTTTCGTTGTGAAATTTGCGGAAAAAGTTTTAGTCGTAAGGAGCATTTTACTAATCATATATTATGGCATACAGgtGAAACTCCACATCGTTGtgatttttgttcaaaaacgTTTACGCGTAAAGAACATCTATTAAATCATGTCCGTCAGCATACTGGCGAATCGCCACATCGTTGTACATATTGTATGAAAACTTTTACACGCAAAGAACATTTGGTCAATCATATACGGCAGCATACTGGCGAAACACCATTCAAATGCACTTATTGCACGAAGGCCTTTACAAGAAAAGATCATATGGTCAATCATGTACGGCAGCATACTGGTGAATCGCCAcataaatgtacattttgtacaaAGACGTTTACGCGCAAAGAACATTTAACGAATCATGTTCGACAACATACCGGTGAATCACCGCATCGTTGCAGCTATTGCAAGAAAACTTTTACTCGCAAAGAGCATCTAACGAATCATACTCGTTTGCACACAGGTGATTCGCCGCACAAATGTGAATATTGTCAGAAAACTTTCACACGCAAAGAACACCTCAACAATCATATGCGTCAGCATTCTAGTGATAATCCACACTGTTGCAATGTCTGTAACAAACCATTTACGCGCAAAGAACATTTAATAAATCACATGTCTCGCTGCCATACCGGTGACCGCCCATATGCCTGTGAAACTTGTGGGAAATCCTTTCCACTTAAAGGAAATTTACTCTTCCATCAGCGTAGTCATACTAAGGGTCAAGAAATGGAAAGACCATTTTCGTGTGAAAAATGtccaaaaacatttatttgtaaAGgaCATTTGGTTTCGCACATGCGTTCCCACTCGGGTGAGAAACCACATGCTTGCACTTTATGTAGTAAAGCATTTGTTGAAAGAGGTAACTTAAAGCGTCATATGAAAATGAATCACCCAAATGCTCCAATGCCACCACCTCCCGTGCCACATCCAGTTATACCTGCCGGAGTTTTACCCCAAATTAAGCAAGAAATGAAACCAGTTATCAGTGAATTAAATACACTTCAAACTGCAGCTCCAACTATGCATACCATACAGCAAATCACAGCTGGAACATCAGGCAATACAGTGCAATTATCAACAGGTTTAACGCCTTTAGTAACATCAACTATAACATCGCATGCCACACAGAAACAGGTGGCACAAACTCAAGCCCAAGTACAGCAAAAccaattacaacaacaaatagTAACTACACATCAGCAACAGCAAGTGGCAGCTCATCAACAAGTtttacaacaacagcagcaacaacaccaGCAAAATCAGTTATTACAGTTGTCTATACAACAAGCTGGGGTTACTGCAGCCCatcaacaaatacaacaacagcatcaaGACCAACAACGTCAACACCATcatcaacagcagcaacaaactCAACAACAAGCTCATCATCAACAACAAACTGCTGCAAATGTTACTGCGGTTGCTAGTGctcatcaacagcaacaacaacaacaacagtcatCTCAGCAACAAACACAAAGCCAACAGCAACCACCACCAGTGCCAATCGCTTTAATACAAGCCGATCAGGATGCTTTGGCGCGTGCTACAATGCAACAATTACAACACATGCCCGCTAATGTTGAACAGCATCCTGTTGTGTATTAG
Protein Sequence
MLQSRDILAVVQPLNQASHQYMSTTNVINADDGSKTTTASAIVAEHKNVMAQQPTVASTNSNTSLPTTDDVSSTQVDVHMSTTLVSGHEPQLLSHHHHQQQQHIHHANPVAGPTLLLSSSGPTTSIPTTGTLLANNPQNLGKYWVVTNLFQGAPGPTTQYNESGATHTQTSIAGVPSSTLVRTISTTAASTAVVAKTEVDSSSAGTLQIPQAQMLSQAGITQQLPNGTIITTQSQQQRHGTDHQQHQHVHAEDNHHQQHIGQHQHVAVLQSSDAIKDEKPFVTNGKLSTANQDLIMQHISTAASSGNPSTSGGATITLGTPKTEIKDDGSVGMGGKLHPGIEMYKVNIEDISQLFTYHEVFGKLHGDVMNHQLSAPATAVSATSSSATEGSNTSGVAVIANSVAMTESNSTSSGCITSTAIVTNSNTAATATSTTTGMAPGGLLMPKMEGGITNVDQNTVTLAPDGTVVSTGEHVCDICGKMFAFRYQLIVHRRYHTERKPFNCQVCGQGFFTSQDLTRHGKIHIGGPMFTCLVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLENHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHYVNHYMWHTGQTPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGESPHRCSYCKKTFTRKEHLTNHTRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPYACETCGKSFPLKGNLLFHQRSHTKGQEMERPFSCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPNAPMPPPPVPHPVIPAGVLPQIKQEMKPVISELNTLQTAAPTMHTIQQITAGTSGNTVQLSTGLTPLVTSTITSHATQKQVAQTQAQVQQNQLQQQIVTTHQQQQVAAHQQVLQQQQQQHQQNQLLQLSIQQAGVTAAHQQIQQQHQDQQRQHHHQQQQQTQQQAHHQQQTAANVTAVASAHQQQQQQQQSSQQQTQSQQQPPPVPIALIQADQDALARATMQQLQHMPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01236968;
90% Identity
-
80% Identity
-